EWM29642.1, cds1035 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|585112214|gb|EWM29642.1| (retinal pigment epithelial membrane protein [Nannochloropsis gaditana]) HSP 1 Score: 1486.09 bits (3846), Expect = 0.000e+0 Identity = 723/723 (100.00%), Postives = 723/723 (100.00%), Query Frame = 0
Query: 1 MATVKTDACIILLAFLCPYVVRSFPGSQPQPPRSTTSIPTSPFAPTKPSCAPLPPHESIFNSDLSPTSKLPGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHGTFLTVGPSKYERGGVPIKCWLEGDGAMTAISFNKGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSGHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPPHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRGAPDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMACNDRGVSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWAPGLLVAVPEEREQTGNVIRNKDGQKEVEGKEFSKGVAK 723
MATVKTDACIILLAFLCPYVVRSFPGSQPQPPRSTTSIPTSPFAPTKPSCAPLPPHESIFNSDLSPTSKLPGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHGTFLTVGPSKYERGGVPIKCWLEGDGAMTAISFNKGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSGHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPPHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRGAPDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMACNDRGVSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWAPGLLVAVPEEREQTGNVIRNKDGQKEVEGKEFSKGVAK
Sbjct: 1 MATVKTDACIILLAFLCPYVVRSFPGSQPQPPRSTTSIPTSPFAPTKPSCAPLPPHESIFNSDLSPTSKLPGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHGTFLTVGPSKYERGGVPIKCWLEGDGAMTAISFNKGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSGHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPPHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRGAPDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMACNDRGVSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWAPGLLVAVPEEREQTGNVIRNKDGQKEVEGKEFSKGVAK 723
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|553193240|ref|XP_005855740.1| (retinal pigment epithelial membrane protein, partial [Nannochloropsis gaditana CCMP526] >gi|553195886|ref|XP_005856225.1| retinal pigment epithelial membrane protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292832|gb|EKU20134.1| retinal pigment epithelial membrane protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293322|gb|EKU20622.1| retinal pigment epithelial membrane protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 303.908 bits (777), Expect = 1.411e-96 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
Query: 271 GHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPPHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKP 415
GHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPPHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKP
Sbjct: 1 GHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPPHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKP 145
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|1062968490|ref|WP_069350669.1| (lignostilbene-alpha,beta-dioxygenase [Scytonema millei] >gi|1061901172|gb|ODN57031.1| lignostilbene-alpha,beta-dioxygenase [Scytonema millei VB511283]) HSP 1 Score: 249.98 bits (637), Expect = 1.138e-70 Identity = 177/601 (29.45%), Postives = 278/601 (46.26%), Query Frame = 0
Query: 90 EAVDYWIEDWEGVIPEDL-HGTFLTVGPSKYERGGVPIKCWLEGDGAMTAISFN-KGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSGHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPPHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRG-APDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMACNDRGVSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNAL-TGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWAP 686
+ Y I + EG IPE L T GP +ERG +K +L+GDG + ISF+ +GK + ++FI T+ Y++E ++ FLYR FG K G G A N D+ KNPSNT + WG + LS +E LP+ +D TL+T G+ + I + L+ L A TAHPR D R++ W+W T + + G P+ L + E+D+ + + + + PHD+ +T +YY++ ++ F ++LP +LG +GP C+ +K ++ +VHLVPRPGG AG P+ E P+F H + A+D G E ++ GW P++ F ++ G APDF + ++ +D++RK+ PS +D P ++P E + A R+++ CN+ G SSPP GY+ LDL TG + W N D + E E V PR+ + E D Y +G+ ++ + +GR SL I +A ++A GP+C+L L H +P G+H W+P
Sbjct: 42 QEFSYQISEIEGSIPETLLSSTLFRNGPGLFERGDTRVKHYLDGDGYLCKISFSPEGKAYFDSKFIRTEEYVQEAAQNSFLYRSTFGMQKPG--GLLA-------------NILDIHLKNPSNTNIVSWGSKFLSLYEAGLPYLIDPYTLDTIGKGALSNFLSERTPIDTGVSALNNFLN--GWKAMTAHPRFDPIQDRMVTWTWHTHV--NLGRPNE-------------------LVLDIVEYDQQWKQKAHTLHSMIGAVVN-PHDFALTQSYYIFFENQFEFDILPYLLGWEGPATCL-KLKSDKP-TLVHLVPRPGGPRAGTKPLVFETIPWFSIHQAFAYDTADGGVE-----IYSTGW------PSSGLKGNFLSSWSGYAPDFDNIAPTYLWKTTIDIQRKKIEHRVAPSTESHCIDHPHINPLRETQDA-RYIYMSYCNNIGESSPPTGYMKLDLKTGDKQYW-----------------------------------WNYDLSFTE-------------ELVFVPRS-------NAIREDDGYLLGMTYDHIHSGRSSLVIIDAKEVAKGPICRLWLNHHVPHGLHGSWSP 534
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|938300997|gb|KPQ34545.1| (all-trans-8'-apo-beta-carotenal 15,15'-oxygenase [Phormidesmis priestleyi Ana]) HSP 1 Score: 246.899 bits (629), Expect = 2.346e-69 Identity = 194/652 (29.75%), Postives = 300/652 (46.01%), Query Frame = 0
Query: 52 PLPPHESIFNSD-----LSPTSKLPGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHG-TFLTVGPSKYERGGVPIKCWLEGDGAMTAISFN-KGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVL-----DAILQKKSG-HAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSP---PHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRG-APDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMACNDRGVSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWAP 686
PLPP+ ++ L + +L WAS F S + +A DY I + EGV+PE+L G T GPS++ERG + +L+GDG + I+F G+V +RF++T Y E + F +R FG K G F S L D+ KNP+NT + WG RLL+ +E +P+ +D TLET G D G + +PVL + ++++ G A TAHP +D RL+ WSW + G P+ L + E++ A++ ++ R P PHD+ +TPNYYV+ ++A +++P +LG K P +C+ K VHL+PRP G AG P+ +E + +F H + A++ + DG+ +VV +++GW PA++ G F ++ G AP+F + ++ ++ +K P + P V+P E A R+++ CN+ G SSPP GY+ LD T + W + P FA P V PRA G+ D + E D + +GV ++ L R SL +F+AADI AGP+C+L H L G+H W+P
Sbjct: 18 PLPPNSVVWGKQGEGEALKRSQQL-------AWASAFRS--QLQAFDYEITEIEGVLPEELKGSTLFRNGPSRFERGDQRVAHYLDGDGYIAKIAFAPDGRVTFSSRFVKTAEYAWEDAANAFGFRTTFGNAKPG-----GFLASLL----------DLHLKNPANTHVVPWGSRLLALYEAGMPYRIDPYTLETLGVEDLLGQL--------VEPVLPPSRWEMMMRRSRGQQAMTAHPHVDPVRDRLVTWSWG--MAAKLGEPN-------------------TLIIELIEYNAAWE----EMSRRQYSMPGAAVNPHDFALTPNYYVFFENALSFDVMPFLLGQKSPADCL---KLLPKPTKVHLIPRPDGAMAGVGPLVLETDQWFSIHQACAYE-QLDGQPDGQVVVYSSGW------PASEGG--FLTSWGGYAPNFDAIAPTFLWQTTLNPRKKSVVHRIAPGTENCCIAHPHVNPNRETL-AVRYLYMPYCNNIGESSPPVGYLRLDTQTQQRQVW-----------------TMHPQSFAEEP-------------------------------VFVPRAG---GRADGENEDDGWLLGVTYDYLQDRSSLMLFDAADIEAGPICRLWFTHHLAHGLHGSWSP 548
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|873223966|emb|CEM27487.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 226.868 bits (577), Expect = 4.829e-61 Identity = 178/649 (27.43%), Postives = 287/649 (44.22%), Query Frame = 0
Query: 68 SKLPGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHGTFLTVGPSKYERGGVPIKCWLEGDGAMTAISFNKGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFK-------------DSFLKIRLPPINAFDMKFKNPSNTKPLYWGGR------LLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSG---HAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWD-EAFDLPFPPVTIRVSDCPSPPHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRGAPDFSRLPIIRYYRLDVDLERKRASFV---AVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMACNDRG--VSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWAPGL 688
+K G+FD D WA++F + + A Y I EG IP DL+GTF +GP+ ++RG I + +GDG +T ISF G+ +++R++ T Y +E ++FL+RG FGT + +S + + +I NAFD + K P NT + + LL+ E P ++ L T+G+ DF G +R E T+ + L + G A AHP++D + + ++W+T RG+ ++V EW + L P T+ DC + PHDW +T +YYV A L+L+P ++G KGP +CM + + HLVPRP G AG P+ +++ + F D + GN V+ ++ W+ + D ++GH+ PDF+ P I YR+ VD+ + P L + + P+ HP EA RH+++M C+ +G +SPPQG V LD+ +G ++WHA A F S P S A E +E+ + + + GR + I + + GP+ K+ L+H +PWGIH+ + P +
Sbjct: 95 AKFDGDFDRDDWAAVFRTQRAEFA--YRIHHVEGTIPRDLNGTFWKIGPALFKRGNSTIANFNDGDGYLTGISFQDGQAWLRSRYVVTPDYRQESAAEQFLFRGCFGTRRQPNTPYSHRQRLTGLIRRLRGSSEEPSQIEHLAENAFDARLKTPPNTNVALFPQKDGNAPHLLALHEAGPPFAVEMSDLSTEGKEDFEGSVR-TEGQTAG--IFGRWLDSRMGMGAEAVNAHPKVDTESGNVAMYTWQT-----------------------QPLRGS-MKVFIREWAPDGTLLSTTPHTM--PDCCAAPHDWALTQSYYVLPDPAMCLHLMPFLMGKKGPAQCM---EYLDRPLRFHLVPRPNGPRAGTEPILVDVGRAGLPMHMAGF----DDQHGNVVI-YSEAWNDDMLEMLEDAESLYGHSDHYWPDFASFPKISLYRIVVDVRSSPPRVIEHRMTPGLERLSIAHPRPHPSREALPF-RHLYSMLCHSKGGRCASPPQGCVRLDVASGEADAWHAGRRA-----------------FTSQPAS----------------------------------ATTEGASQVPSDEMAGWLLTFVHDVEAGRPYVAILDPKAVHRGPVAKVWLEHHVPWGIHTTYVPNV 652
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|499368292|ref|WP_011055870.1| (lignostilbene alpha-beta-dioxygenase [Thermosynechococcus elongatus] >gi|22297559|ref|NP_680806.1| lignostilbene-alpha,beta-dioxygenase [Thermosynechococcus elongatus BP-1] >gi|22293736|dbj|BAC07568.1| lignostilbene-alpha,beta-dioxygenase [Thermosynechococcus elongatus BP-1]) HSP 1 Score: 219.164 bits (557), Expect = 8.033e-60 Identity = 188/629 (29.89%), Postives = 271/629 (43.08%), Query Frame = 0
Query: 67 TSKLPGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHGTFLTVGPSKYERGGVPIKCWLEGDGAMTAISFNKGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSGHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPP----------HDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRGAPDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAP-RHVWAMACNDRGVSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEW 684
T L + + W SL ++ DYWIE+ EG +P DL GT GP ERGGVP+ +GDG + A F KG+VH + R++ T +LEE+ +R LYRG FGT K G GW A N D + KN +NT +YW G+LL+ +E +LPH LD TLET G + GGL+R + AF AHPR D T+RL+ +FGV G + YE+D C S P HD+ +TPNY + Q+ + N LP +LGL+G +C+ E R V L+PR GG PP + M P F+ H ++A++V GD + S F P + G F +F+ LP +R+ ++ + K + V +FP VHP G P R+ + A +D ++P Q D TG + W S+ P F S P IVV G+ + +G+E D + + V ++A + L IF+AA I+AGP+ +LHL+H +P+G+H +
Sbjct: 2 TGVLDRPYTMADWRGGTESLTQE--YDYWIEEVEGTVPTDLVGTLYRNGPGLLERGGVPLAHPFDGDGMICAFRFEKGRVHFRNRYVRTAGFLEEEKANRLLYRGVFGTQKPG--GWFA-------------NFLDTRVKNIANTHVIYWAGKLLALWEASLPHRLDPVTLETIGLDNLGGLLRERD-------------------AFAAHPRFDPQTQRLV----------NFGV-----------------QPGLNTRIRLYEFDAN------------GQCVSQPTFQIPGFAFIHDFALTPNYAIVFQNPVQFNPLPYLLGLRGAAQCLQFNAQEPTR--VWLLPRRGG-----PPQMLTMPPCFVFHHANAYEV-GDEIHVESIA-------YSHF-PNLEPGMDFREV-----NFAALPASLLWRIQLNPKTKAVDWQVVSDRP---CEFPVVHP--AKVGQPYRYTYLAAGHDPKTNAPLQALWRCDRQTGEEQFW-----------------SAAPRGFVSEP-------------------------IVVPRGLQKGDFLWQGAQGEE----DGWLLQVVYDASCHKSQLLIFDAAAISAGPVARLHLKHHIPYGLHGSF 483
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|493499793|ref|WP_006454316.1| (Retinal pigment epithelial membrane protein [Synechococcus sp. PCC 7335] >gi|196189605|gb|EDX84569.1| Retinal pigment epithelial membrane protein [Synechococcus sp. PCC 7335]) HSP 1 Score: 219.164 bits (557), Expect = 1.911e-59 Identity = 177/646 (27.40%), Postives = 277/646 (42.88%), Query Frame = 0
Query: 51 APLPPHESIFNSDLSPTSKLPGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHG-TFLTVGPSKYERGGVPIKCWLEGDGAMTAISFNK-GKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSGHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSP---PHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECM----VPVKGEEARAVVHLVPRPGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRG-APDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMA-CNDRGVSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWA 685
APLPP+ + K + W + F S + + +Y I EG IP++L G T GPS++ERG + +L+GDG + I+F + GKVH +RFI T + E+ + F +R FG ++ P D+ KNP+NT + WG +LL+ +E P+ +D TLET G G + S L A+L+++ A TAHP ID A+ RL+ W+W + H + L + E+D + +++ + PS PHD+ +TPNYY++ Q+AF L +L +LG K P +C+ +P K VHL+PRP G AG P+ ++ E +F H + A++ DG V +++GW PA G F ++ G APDF + Y + + + P+L + P H + E P MA CN+ G SSPP GY+ + T +E+W+A P FA P+ + N+D D + + + ++ L R +L IF+ ++ GP+C+L L H L G+H W
Sbjct: 4 APLPPNSIAWGKQ--GEGKALKDVQQAAWNAAFQS--QLQEFEYEITHIEGEIPDELRGSTLFRNGPSRFERGQQRVSHYLDGDGYLAKITFTREGKVHFTSRFISTAEHKLEETTNAFQFRTTFGN----------------PLKHPLSLLLDLHLKNPANTHIVAWGDKLLALYEAGAPYRIDPHTLETLGLETLSGELNSNPLPRSR---LGALLRRRGQQAMTAHPHIDPASNRLITWTWGIQVNLH---------------------KPNSLNLEIIEYDSNWQ----SLSLTTHEMPSAVVNPHDFALTPNYYIFFQNAFSLRILDYLLGRKSPADCLTLKPIPTK-------VHLIPRPDGSKAGNAPLVLDTEQWFSIHQACAWE-NADG----SVEIYSSGW------PATTGG--FLTSWSGYAPDFDAIAPTFLYHTQIYPSTQTVTHRITPALENYCIAHP--HTNTQTETQPSQYLYMAYCNNIGQSSPPTGYLKYNTQTQEIETWNAH-----------------PLNFAEEPVFVPHSQGNKD---------------------------------------DGWLLCLMYDHLRDRSALNIFDTTKLSTGPICRLWLTHPLAHGLHGSWV 523
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|1111738702|gb|OJJ25133.1| (Apocarotenoid-15,15'-oxygenase [Roseofilum reptotaenium AO1-A]) HSP 1 Score: 216.853 bits (551), Expect = 6.365e-59 Identity = 173/624 (27.72%), Postives = 272/624 (43.59%), Query Frame = 0
Query: 71 PGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHGTFLTVGPSKYERGGVPIKCWLEGDGAMTAISFNKGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSGHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPS--PPHDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPRPGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRGAPDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMACNDRGVSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWAPGLLVAV 692
P ++D W+ + S + DYWIED EG IP+ L GT L GP + GG PI +GDG + AI+F G+ H + R++ T+ Y+EE+ + LYRG FGT K G GW A N FD++ KN +NT +YW RLL+ +E PH LD QTLET + D K+G AF+AHP+I DP RS + + G ++T +E F+L P+ + P HD+ +TP YY+++Q+ N P + GL GPGEC+ + +A V +PR G + IE++ F+ H +AF EE N+++ + G++ P + G F +T DF+RL + +R +DL +KR + S +FP++HP++ + + R+V+ A + S+P QG + D +G + W S+ P F S P+ + + +D G +S V + + R + I +A ++ P+ +LHLQH +P+G+H W P + +
Sbjct: 8 PLSYDRQQWSQGYQS--QPHEYDYWIEDIEGEIPQQLEGTLLRNGPGLLDIGGYPIAHPFDGDGMVNAIAFKGGRAHYRNRYVRTQGYIEEQKAGKPLYRGVFGTQKPG--GWFA-------------NLFDLRLKNLANTHIIYWADRLLALWEGGQPHRLDPQTLETLE-------------------LDDLDGLLKTGQAFSAHPKI-----------------------DPYGDRSNPCLVNFSIQPGLNSQLTIWE----FNLKGQPLRQSTHEIPGFCFIHDFAITPQYYLFLQNPVSFNPFPFLFGLLGPGECIDFDRHNVTKAWV--IPRQGNQRMK----MIEIDSGFVFHHVNAF------EEKNQIILDSIGYES---FPEVEPGSDFRYT-----DFNRLAPSQLWRFRLDLTKKRGDRQLLESRC---CEFPQIHPQWVGQ-SHRYVYLGAAHQNRGSAPLQGVLKRDNQSGETQFW-----------------SAAPHGFVSEPIFIPQPGSDVEDKGWIIS--------------------------------------VVYQSQNHRSDIIILDAENLEQEPIARLHLQHHIPYGLHGSWIPNQQLGI 489
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|654353155|ref|WP_027846095.1| (Apocarotenoid-15,15'-oxygenase [Mastigocoleus testarum] >gi|959129584|gb|KST64848.1| Apocarotenoid-15,15'-oxygenase [Mastigocoleus testarum BC008]) HSP 1 Score: 214.157 bits (544), Expect = 9.631e-58 Identity = 178/643 (27.68%), Postives = 281/643 (43.70%), Query Frame = 0
Query: 57 ESIFNSDLSPTS-KLPGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHGTFLTVGPSKYERGGVPIKCWLEGDGAMTAISFNKGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSGHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPP--HDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVV--HLVPRPGGRHAG--KPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRGAPDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMACNDRGVS--SPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWAPGLLV 690
+S SD PTS ++ D W + SL ++ DYWI++ EG IP +L GT GP + G + +GDG ++ ISF G+ H RF+ T AYLEE+ + LYRG FGT K G GW A NAFD + KN +NT +YWGG+LL+ +E A PH LD TL+T G+ F G++ GE AF+AHPR D ++ R G A + + G +T +E D+ + V + P HD+ +TPNY ++ Q+ N LP LG++G GEC+ G+ RAV+ P+ ++ G + IE+E F+ H ++A+ EEG++++ + ++ N D F T DF L + +R ++++ + + + +FP +HP + R+V+ + D VS +P Q ++ LD TG + W S+ P FAS P + P C+PG E+ D + + V +++ R + I +A D+ GP+ KLHL+H +P+G+H + + +
Sbjct: 2 QSFSTSDTLPTSTNGKKTYNRDDWKGGYQSLKQE--FDYWIDEIEGEIPPELTGTLFRNGPGLLDINGQTFQHPFDGDGMISRISFCNGRAHFSNRFVRTSAYLEEQAAGQILYRGVFGTQKPG--GWLA-------------NAFDFRLKNIANTNIIYWGGKLLALWEAAEPHRLDPHTLDTLGKEHFNGVLSEGE-------------------AFSAHPRFDPSSSRDDG---------------------APCMVNFSTKAGLSTAITIFELDDKAQV----VRQHTHNVPGFAFIHDFAITPNYCIFFQNPVTFNPLPFALGMRGAGECVKFQPGKPTRAVIISRNPPQTDKKNNGNYRRQQIIEIEAGFVFHHANAY------EEGDEIIIDSICYESLPEVEPNSD---FRET-----DFESLKPGQLWRFHLNIKDNTSR---KELIENSCCEFPTIHPD-QVGRNNRYVY-LGTVDPNVSGNAPLQAFLKLDRETGEKQFW-----------------SAAPKGFASEP-------------------------------IFVP---CDPGSNTGDED-DGWLLAVIYDSAEHRSDVVILDAKDLQQGPIAKLHLKHHIPYGLHGNFTSKVFI 512
BLAST of EWM29642.1 vs. NCBI_GenBank
Match: gi|1210251014|dbj|BAZ70025.1| (Retinal pigment epithelial membrane protein [Fischerella sp. NIES-4106]) HSP 1 Score: 213.001 bits (541), Expect = 8.867e-57 Identity = 189/694 (27.23%), Postives = 297/694 (42.80%), Query Frame = 0
Query: 12 LLAF----LCPYVVRSFPGSQPQPPRSTTSIPTSPFAPTKPSCAPLPPHESIFNSDLSPTSKLPGNFDLDTWASLFASLDEDEAVDYWIEDWEGVIPEDLHGTFLTVGPSKYERGGVPIKCWLEGDGAMTAISFNKGKVHVKARFIETKAYLEEKVEDRFLYRGQFGTMKTGRHGWSAFKDSFLKIRLPPINAFDMKFKNPSNTKPLYWGGRLLSTFETALPHELDTQTLETKGEFDFGGLMRPGEAITSADPVLDAILQKKSGHAFTAHPRIDKATKRLLGWSWKTLLPKHFGVPDPRLWRSAKGKKSRTESRGAGLEVTFYEWDEAFDLPFPPVTIRVSDCPSPP-----HDWVVTPNYYVWMQSAFRLNLLPCVLGLKGPGECMVPVKGEEARAVVHLVPR------PGGRHAGKPPVAIEMEPYFMTHWSHAFDVEGDGEEGNKVVGFAAGWDKSLFSPANDDGHMFGHTYRGAPDFSRLPIIRYYRLDVDLERKRASFVAVPSLAKTFLDFPKVHPRFEAEGAPRHVWAMACNDRGVSSPPQGYVHLDLGTGLVESWHAPSSAAALAAARQAPSSSLPSMFASPPLSLSAVDMNRDDTGGELSVEDRTKHIVVGEGVLAPRAACEPGKGDEQEELDSYWMGVEFNALTGRRSLCIFNAADIAAGPLCKLHLQHSLPWGIHSEWAPGLLV 690
LL+F L P FP PQ P P SPF + P+ E+ ++S S P ++ + W + SL ++ DYWI+D EG IP +L+G+ GP + G I +GDG ++ I+F+ G+ H + RF+ T AYLEE+ + LYRG FGT K G GW A NAFD K KN +NT +YWG +LL+ +E A PH LD TL+T G+ F G++ GE AF+AHPR D + + F +P L + + G +T +E D TI S P HD+ +TPNY V+ Q+ N +P LG++G GEC+ + R ++ +PR P + K +E F+ H ++AF E+GN+++ + ++ P + G+ F T DF L + +R ++L+ K V L +FP +HP+ + + +++ A + ++P Q ++ +DL +G + W S+ P FAS P V PR QEE D + + + ++A R + I +A + GP+ +LHL+H +P+G+H + + V
Sbjct: 22 LLSFPHSPLSPIPNSQFPFPNPQSP---IPFPQSPFPNPQSPLQPMQTFET--QEEISQISTKP--YNRNDWQGGYKSLKQE--FDYWIDDIEGQIPPELNGSLFRNGPGLLDINGQLIHHPFDGDGMISRITFSNGRAHFRNRFVRTDAYLEEQKAGKLLYRGVFGTQKPG--GWLA-------------NAFDFKLKNIANTNVIYWGDKLLALWEAAEPHRLDPHTLDTLGKEYFHGVLSEGE-------------------AFSAHPRFDPSCE--------------FDGGEPCL-------VNFSIKPGLSTTITIFELDTT-------GTIVRKHAHSVPGFAFIHDFAITPNYCVFFQNPVSFNPIPFALGIRGAGECIKFQPNQPTRVII--IPRRTPLKSPLDKGGLKGVQILETHSGFVFHHANAF------EQGNEIIIDSICYES---LPEVESGNDFRQT-----DFDALKPGQLWRFHLNLQDKT---VQRKLLENRCCEFPTLHPQ-KVGRSHHYLYIGAADVPSGNAPLQAFLKMDLHSGEKQLW-----------------SAAPKGFASEP-------------------------------VFVPRP-------HSQEEDDGWVLALVYDANCDRSDVVILDARNFNIGPVARLHLKHHIPYGLHGNFTSEVFV 569 The following BLAST results are available for this feature:
BLAST of EWM29642.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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