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Properties
Property Name | Value |
Product | phosphoglycerate mutase 1 family |
Orig transcript id | gnl|cribi|Naga_100050g24.6871.mrna |
Orig protein id | gnl|cribi|Naga_100050g24.6871 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002456.1 | supercontig | CM002456.1:1011460..1014436 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1035 ID=rna1035|Name=rna1035|organism=Nannochloropsis gaditana|type=mRNA|length=2102bp GCGCAACGGCACATAAGCTGTACGCGATCCTGATATGTCTTTCACTCTCT TGTCCATCTCTCAGGGGCGCTTTTAAAACCTCCCTTCGGCCCCTTCGCCT TTTCCACGCACAGGCCCTTCCTCTTGCGACCATATCGCGCCAGGTTTCAT GAATCCCTTGCATGGTTTTCGGAGAGTCGTAGCCCTTGGCTCAACAAAGC ATCCAGCTTTGAGATGCTTGCGCTGCTTGGCTAGCATGTCGGCCCACCAA CACAGTTCCCCCGACACAGCCGCCACTACTAGCCCTTCCGTCAGCTTCTA CGAGCAAAGCTCAACCCCCTCATCCACGCCATTTTCAAGGGAGGTGTCTC CACCAGTATCGAGAAAGAATGACATGGGTGTCACTGAAGCACTCCCATCG GACTTTCGACAGCACGTCGAACCTGAAACCTCCTCAGCCCAGGTGTCTCA CCCCCACAGTGCTAGTGAGGGGGACAAGGCGGTCGTGATTCATAACAGCG CCAATTCTATCGTACAAAGCTTTTATAGACGGCAACTTCCTACGTCACAT TGCGTTCCATTCAATTCCTCGGAGGGTCGGCGCCTATTTCAGGAGGCATT GATGCAGGGCGGGTTGGAGAGCTACTTTCCCTTGTCCGAGCAGTTCAAAA CCCAGGATGATCCCGCTTTTTGTGGCCTGGGGGCATTAACGATGGTGTTG AACGCTTTGGCGATCGATCCAGGCAGGACATGGAAAGGCCCGTGGCGCTG GTTCGACGAAAGCATGCTTGAGTGCTGCGAACCCCTGGAGGTGGTCCGAG AGCGCGGGATCTGCCTAGGGAAGCTTGACTGTCTGGCGCGCTGCAATGGG GCTACCACCGTCCTTAAGTACGGAGACAGCACGGGGCTCGACGAGTTCCG GAGGGACATCATTCGAACGACGGGAGGGGGAAGGGAAGCTTGCCATGGAG GAGGAAAAGAGGGAGCGACGGACTTTTCTCGTGTCCCCGGCACATTGGCC CGCGCTGAACACACTAATGGTTCCGAACAAACGCACATGCAGTACGAACA GCAGGACTTGCTCATCGTTGGCTACAACAGGCAGGTGCTGGGGCAGACAG GGTCGGGCCACTTCTCCCCCGTTGGGGGTTACCACGCAGGAAGGGACATG GCGCTGATCATGGACGTTGCCCGCTTCAAGTACCCGCCGCACTGGGTTCC GGTCCCTTTGCTCTGGGAAGCCATGCAGACTGTGGACCCGGAGACGCAGC GCTCGCGCGGCTACATGGTGGTGGCGAAAGGGATGGTCTCGGAGAGCTTG CTCTTTACCATCGACAAGTCGCGGTACGAGGAATTCAAGGACCTAGCCTC TTGGATTCGAAAGGCGGCCGACAGGCTACCCCTTTTGATGGAGGCTGAGA TGACTAGAAATACGGGGGTGCCGGGAGGAGAAAGCGGGGGGACCGTCGGA GCAGCCCGACTCGATCATGACAGGCTGTTGCCTTTGTTTTTAGAGTCATT GCCCGCGAGCATTGCCAGCATGTTTGTCACCATCCATGAATCCTTTTGCC TTCGATATTCGGAGAAGCATCTCAAGTCCATAGGTGACCTGCTGGGGGCA ATAGAGGCGCATCCCATCTACGAGACCATGGGGGCACAGCACGAAGCTCG CTTGGATCGCTTTCGCACCCCTTGTAGTCGTCGACACGTTGCTGCAGAGG AGGCATGTTGCGCGGGAAAGGTAGTAAACGAGCGCCACGTCCTCACCATT CTTTATATTTCGATGCTTGAGTGGGTATGCCAGCGTCAAAAATGGTCAAT ATTTGGCCTCTTTCCGGCTCAAGCGTTACACAGTCCACCTTTGCAGCTGG AAGTAGCTCAATTGAAGCGGAAAATTGCTGCCATGGCAGATGAAATGGGA CCAAGGTGATGAAGTGTACCGAATATAAATCAGTGAGATAGGTAATAGAA ACGCAGTATCGATATGGGTCAAGTAAAGAAGCTCGACTGTGATGCAATGT GTGGAACGTATCCTGTCCCTCTTTCCTGCGTTTCCACACACAGAACAGGA AAAACTATGAAATTGTGCTTTTCGTTCGAGTCTTTTAACCACACCCACTC GC back to topprotein sequence of rna1035 >rna1035-protein ID=rna1035-protein|Name=rna1035|organism=Nannochloropsis gaditana|type=polypeptide|length=571bp MLTMRRLLNTQPRKTLLHKLFFRVAIFGAIISFRPASAFLSPLVPRCSFT FRHEVSSTIVCMMAPHRVHGVDSMWNSLHHGSNTTFVSEIEDDVFAGSNS WAKKVYRALNAATKRKEPGKLIMIRHGESMLNYNKTFTGWIDADLNERGI RETEHSARLLMERGYEIDVTYTSRLKRAIRSSWILMTELGQIYRPVYKSW RLNERMYGALEGMSKPGLAEELGEEVVQAFRTGLTTTPPPMTPDHPHWHM HEKKYADVKPEEIPVTESLQDTMERTLPLWESRILPDLRSGRTVMIVAHA NSLRGIVKHIDNLNQTEIQSVAIPNGIPLVYKFDKNMVPIEQEGAVSPLT GEFLEKKGLLRAALAKEAELAASVPGYSTDGGGFRGNANLPVMDARLRGL AKLSEARQLIAATSLGVPPPLAPLPQAVPATRVAYPRLVVPKAASSPPSA GAPDAKNAQEHDQIIVIMRHGKTEYNKLGVFTGWEDAPLANEGRIEARNA GKLLKRHGIELDVVYTSWLSRAIETAWLIVDELDCLWVPIVKSWRLNEVG REGCQGGSMRGWGSSMCDVSD back to topmRNA from alignment at CM002456.1:1011460..1014436+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1035 ID=rna1035|Name=rna1035|organism=Nannochloropsis gaditana|type=mRNA|length=2977bp|location=Sequence derived from alignment at CM002456.1:1011460..1014436+ (Nannochloropsis gaditana) GTGCACGAGCCAAGCTACTTCTTTCTGCCTCACCCTAAGATGTATATCTG
CACAATTTAAATAGGCTATCGCCGGCCCTTTACGATTGCTTCGAGCACTG
CCTTGTAGTGGACTGCACAGGGCAACGCATCTCCTACGAAACATCGCACC
CTCATACATTCGtagctccttcctctcctgtcCCCCAGAGAAGTCAAAGT
TTACGTATTACCTTCTTAAATGCTCACGATGCGCCGGCTATTGAACACTC
AACCTCGCAAGACACTCTTGCACAAGCTATTTTTTAGGGTTGCGATCTTC
GGGGCCATCATTTCATTTAGGCCCGCAAGCGCTTTCTTGTCCCCATTGGT
CCCGAGATGTAGTTTTACATTCCGCCATGAAGTCTCATCCACTATAGTGT
GCATGATGGCACCTCACCGAGTACATGGTGTCGACAGTATGTGGAATTCG
CTCCATCACGGAAGCAACACGACTTTCGTTTCCGAAATCGAGGACGACGT
GTTTGCGGGATCAAACTCCTGGGCCAAGAAGGTTTACAGAGCACTCAACG
CCGCCACAAAGCGCAAGGAACCCGGCAAATTGATCATGATCCGCCACGGA
GAGTCCATGCTGAATTACAACAAGACATTCACGGGTTGGATCGACGCGGA
CCTGAACGAACGGGGCATTCGGGAGACGGAGCACTCGGCACGCTTGCTGA
TGGAGCGTGGCTACGAAATCGACGTCACCTACACCTCACGCCTAAAGCGC
GCCATTCGATCGAGTTGGATCCTCATGACGGAGCTGGGGCAGATCTATCG
GCCCGTGTACAAATCCTGGCGCCTGAACGAGAGGATGTACGGAGCCCTCG
AAGGCATGAGCAAGCCCGGGCTGGccgaggagctgggggaggaagtggtc
cAGGCATTCCGCACGGGACTGACcacgacgcctcctcccatgaCGCCCGA
CCACCCCCACTGGCACATGCACGAGAAGAAGTACGCGGACGTGAAGCCGG
AGGAGATCCCCGTCACCGAGTCCCTGCAGGACACCATGGAGCGGACCTTG
CCCCTGTGGGAATCGCGCATCCTCCCAGACCTGCGATCGGGCCGCACCGT
CATGATCGTGGCGCACGCGAACTCGCTCCGGGGCATCGTCAAGCACATCG
ACAACCTGAACCAGACGGAGATCCAGTCGGTGGCCATTCCCAACGGAATC
CCCCTCGTCTACAAGTTCGACAAGAACATGGTGCCTATcgagcaagaggg
agcggtCTCGCCCCTGACGGGAGAGTTCCTCGAGAAGAAAGGACTCCTGC
GCGCTGCCCTTGCGAAAGAGGCAGAGCTGGCCGCCTCCGTGCCTGGGTAC
TCCACCGACGGGGGTGGATTCCGAGGCAATGCCAACTTGCCCGTGATGGA
CGCACGCTTGCGGGGCCTGGCCAAGCTCTCAGAAGCCCGGCAACTTATCG
CAGCCACCAGTTTGGGAGTCCCGCCCCCGcttgctccccttccccaggcT
GTGCCAGCGACTCGCGTGGCTTACCCTCGCCTGGTGGTCCCCAAAGCCGC
GTCTTCGCCGCCGAGTGCCGGGGCACCGGATGCGAAGAACGCGCAAGAGC
ATGACCAAATCATCGTCATCATGCGCCACGGGAAGACCGAGTACAACAAG
CTCGGCGTGTTCACGGGCTGGGAAGACGCCCCCTTGGCCAACGAGGGTCG
GATCGAGGCGCGCAACGCGGGGAAGCTCCTGAAGCGGCACGGCATCGAGC
TCGACGTCGTCTACACCTCCTGGCTCTCCCGGGCTATTGAGACGGCCTGG
TTGATTGTGGACGAGCTGGACTGCCTCTGGGTGCCGATTGTCAAGTCCTG
GCGGCTGAACGAggtgggacgggagggtTGCCAGGGAGGGTCGATGAGGG
GGTGGGGTTCTTCCATGTGCGACGTGTCAGATTGAAGCGTTTGCAGGCAT
GGCCGGAATTTGTTATTCTCGTCTGCGCGGCTGCTCtgaccctccttctt
tcctccctctggctGCCAGCGACATTACGGCGCCCTGACAGGCCTCTCCA
AGAAAATGATTGCCCAGCGCCACGGAGAGGCCAAATTTAAACGCTGGCGA
CGCTCCTATGCCACAAGGCCACCCGAGGtatcttccttctcgtcccacTA
CCCCGGCAACGACGACCGATACGTGAAATACGCGGAAGACATGCGGGTCT
CGGTCCGGGAGACGCTGATTCGGTCCCTCTCCGACATGCGCGTGAAGATC
CACCGGAAGTTTCCCAAGGCGGAGAGCTTGAAAGACTGCATGAGCAGGAC
GATTCCTTTTTACACCGACCACATCGTACCGCAATCCGTCGCGAAGGGCA
AAACGGTCCTGATAGCTTCCTCGGAGAACGCGATCCGAGGCTTGTTCATG
CACCTGTGTGACATCCCCGCCGACCGCATCGCCGAGGTCGAGATTCCCAC
GGGCCTGCCGCTCGTCTACAACATTCGCAAGAGGTGCATCCAACTCCTAG
AGACGGGCTTTGAGAACCCACAAGATCCATTGGGGCACTTAAATTTCGGC
TCCTCGCCTGAGCTATTGTTCCAGCCTTGCGATGCCGAGCGGGACACGGA
GTGCTTTTTGGGCGCCGACGGGAAATCCTATAGGTACGATCCCCTGATCC
GActgggggaggcagagaggaggaatttggaggaggacatgatggcggaa
gcggaggaaaaggcctcgTCTAAGCCCTCCagcggccctccctctcctcc
atccacttCGTCTGctcccgccgctgctgcgtccgccaaggcggctgctg
ctgcccctCGGCCAACGGCGCCTGCTTCTGTGTAGAGGCTATGTTTGTGT
GAAGATGTAATGTATACACGTTGACAGTATAGTGCGATAAATGACAAAGA
ATCTCGTCATTTTTAGCAAGACTACCCTTCTCAGCGTGCGCGGAAAAGGT
TGCTTTCGCTTTAATTGCTTGTAATCT back to topCoding sequence (CDS) from alignment at CM002456.1:1011460..1014436+ >rna1035 ID=rna1035|Name=rna1035|organism=Nannochloropsis gaditana|type=CDS|length=1716bp|location=Sequence derived from alignment at CM002456.1:1011460..1014436+ (Nannochloropsis gaditana) ATGCTCACGATGCGCCGGCTATTGAACACTCAACCTCGCAAGACACTCTT GCACAAGCTATTTTTTAGGGTTGCGATCTTCGGGGCCATCATTTCATTTA GGCCCGCAAGCGCTTTCTTGTCCCCATTGGTCCCGAGATGTAGTTTTACA TTCCGCCATGAAGTCTCATCCACTATAGTGTGCATGATGGCACCTCACCG AGTACATGGTGTCGACAGTATGTGGAATTCGCTCCATCACGGAAGCAACA CGACTTTCGTTTCCGAAATCGAGGACGACGTGTTTGCGGGATCAAACTCC TGGGCCAAGAAGGTTTACAGAGCACTCAACGCCGCCACAAAGCGCAAGGA ACCCGGCAAATTGATCATGATCCGCCACGGAGAGTCCATGCTGAATTACA ACAAGACATTCACGGGTTGGATCGACGCGGACCTGAACGAACGGGGCATT CGGGAGACGGAGCACTCGGCACGCTTGCTGATGGAGCGTGGCTACGAAAT CGACGTCACCTACACCTCACGCCTAAAGCGCGCCATTCGATCGAGTTGGA TCCTCATGACGGAGCTGGGGCAGATCTATCGGCCCGTGTACAAATCCTGG CGCCTGAACGAGAGGATGTACGGAGCCCTCGAAGGCATGAGCAAGCCCGG GCTGGccgaggagctgggggaggaagtggtccAGGCATTCCGCACGGGAC TGACcacgacgcctcctcccatgaCGCCCGACCACCCCCACTGGCACATG CACGAGAAGAAGTACGCGGACGTGAAGCCGGAGGAGATCCCCGTCACCGA GTCCCTGCAGGACACCATGGAGCGGACCTTGCCCCTGTGGGAATCGCGCA TCCTCCCAGACCTGCGATCGGGCCGCACCGTCATGATCGTGGCGCACGCG AACTCGCTCCGGGGCATCGTCAAGCACATCGACAACCTGAACCAGACGGA GATCCAGTCGGTGGCCATTCCCAACGGAATCCCCCTCGTCTACAAGTTCG ACAAGAACATGGTGCCTATcgagcaagagggagcggtCTCGCCCCTGACG GGAGAGTTCCTCGAGAAGAAAGGACTCCTGCGCGCTGCCCTTGCGAAAGA GGCAGAGCTGGCCGCCTCCGTGCCTGGGTACTCCACCGACGGGGGTGGAT TCCGAGGCAATGCCAACTTGCCCGTGATGGACGCACGCTTGCGGGGCCTG GCCAAGCTCTCAGAAGCCCGGCAACTTATCGCAGCCACCAGTTTGGGAGT CCCGCCCCCGcttgctccccttccccaggcTGTGCCAGCGACTCGCGTGG CTTACCCTCGCCTGGTGGTCCCCAAAGCCGCGTCTTCGCCGCCGAGTGCC GGGGCACCGGATGCGAAGAACGCGCAAGAGCATGACCAAATCATCGTCAT CATGCGCCACGGGAAGACCGAGTACAACAAGCTCGGCGTGTTCACGGGCT GGGAAGACGCCCCCTTGGCCAACGAGGGTCGGATCGAGGCGCGCAACGCG GGGAAGCTCCTGAAGCGGCACGGCATCGAGCTCGACGTCGTCTACACCTC CTGGCTCTCCCGGGCTATTGAGACGGCCTGGTTGATTGTGGACGAGCTGG ACTGCCTCTGGGTGCCGATTGTCAAGTCCTGGCGGCTGAACGAggtggga cgggagggtTGCCAGGGAGGGTCGATGAGGGGGTGGGGTTCTTCCATGTG CGACGTGTCAGATTGA back to top
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