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Properties
| Property Name | Value |
|---|
| Product | histone h1 |
| Orig transcript id | gnl|cribi|Naga_100050g28.6852.mrna |
| Orig protein id | gnl|cribi|Naga_100050g28.6852 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:1003748..1005535 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1032 ID=rna1032|Name=rna1032|organism=Nannochloropsis gaditana|type=mRNA|length=1002bp
GCGTCTGCGTGATTGTGCTTCCATCTTAGGCATCCTACTGTTTCTCATGG
CCACAAAGAGAAAAAGAGTTTTCTTCCTCGATAGATCAATTGTCTATCAG
AAATCGCAAGTGCGTTTCTGTCGTTCTCACTGGTCGATATGTCTCGTGAG
TCCCTCATCCCCCTTCCCGCCCAACCCTCGACTTCTCGTGTTCCCATATC
GTACGACATAAAAGCACTCATGCGCCCGTGCATACACACAATCGCTCTTG
CACGGTGTCTCAAATCCTTTTTGAGGGACTTCACACATCTTGTCTAATGA
AAATCTCATTCATTGTCTTATATTCCTATCTTGGCAGTTCAACACACCCA
AACTCTCAAATCATGTCTGGACGCGGCAAGGGCGGCAAGGGCCTCGGCAA
AGGCGGCGCTAAGCGCCACCGCAAGGTGTTGCGTGACAACATCCAGGGCA
TTACCAAGCCCGCCATCCGTCGTTTGGCCCGCCGAGGTGGTGTCAAGCGT
ATCTCGGGCCTCATCTACGAGGAGACCCGCGGTGTGCTCAAGGTCTTCCT
GGAGAACGTCATCCGTGATTCCGTCACCTACACTGAGCACGCCCGCCGCA
AGACCGTCACGGCTCTTGATGTCGTGTACGCTCTGAAGCGACAGGGCCGC
ACTCTGTACGGCTTCGGTGGTTAAGCATCAGCTTAAGTTCATGAGCGCTG
ACATGCTCGAGTCACATCCAATCAAATTCAAGGGACTTTTCAGTCCCCCC
TTTCATGTGAAGCCTCGTACACGCGATCTTTTTATTTTTTAATTTTCTTG
CCCTGAGTGCCAATGCGCATATAAATTTCGTATGTCCGCGCCATTCCGCC
TTCCGCGTAAGCACGAGCAATACTATTTACTGCAGAGATGGGCACCTTGT
CAGATCGTTGTCTTCGCAGCCAACATAACACGACACACTTCAACGCCTCA
CTAGGTAACCTAAGTGAAAACAAACATCTTGAGTACTGTTCAAGCTGGTA
AC back to topprotein sequence of rna1032 >rna1032-protein ID=rna1032-protein|Name=rna1032|organism=Nannochloropsis gaditana|type=polypeptide|length=208bp
MSKPSNFDLIREAILALKDRTGSSPAAIRAYLTKNSPSFQDDHHFKAALR
SGEKTGKLIKVKASYKLSEAAKKVAKAVKAVKKVTKKASAVARKSAPKEK
VASLKRAAAGPAPAKKVVAKKNYAPGKKSSTKKAVPAKKRTAAKKSAPAK
RPVAKKTGAKNIAPTKKAASSKKSASSKKTTPATKAVASKKTAPKRAALK
KKSTLKKK back to topmRNA from alignment at CM002456.1:1003748..1005535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1032 ID=rna1032|Name=rna1032|organism=Nannochloropsis gaditana|type=mRNA|length=1788bp|location=Sequence derived from alignment at CM002456.1:1003748..1005535+ (Nannochloropsis gaditana)
CATGTCGAAACCATCCAATTTCGACCTAATCAGGGAGGCCATCCTTGCTT
TGAAAGATCGCACaggctcctctcccgcggctATTAGGGCCTACTTGACA
AAAAATAGTCCCTCATTTCAGGACGACCATCACTTCAAAGCGGCTCTCAG
GTCGGGCGAAAAAACTGGAAAGTTGATCAAAGTACGTATGAATAACATGT
TCCACGGTATCCTGACTTTCTGAAAGATATTCTGGTAGAATTTTTGCACA
GCCATCGTGGGTGGGATCCTTCGCCCTTGCTTGTGAAAAGGATTCTTCTT
CCATGCACACTTTTTTGGAAGGTGGAGTTTTGGGTAAGCAATGATCTTAC
CCCTCTTTACTAAGGTTGCTCAAAATTTCGGGTCAGGTCAAAGCGTCGTA
CAAGCTGAGTGAGGCCGCCAAAAAAGTCGCGAAAGCGGTTAAGGCAGTCA
AGAAGGTGACGAAGAAAGCAAGCGCTGTGGCCAGGAAGAGCGCCCCCAAA
GAGAAGGTAGCATCCCTAAAAAGAGCTGCAGCTGGTCCCGCGCCGGCGAA
GAAAGTTGTTGCAAAGAAAAACTATGCCCCTGGAAAGAAGTCTTCAACAA
AGAAAGCGGTGCCTGCCAAGAAGAGAACTGCCGCAAAAAAATCCGCACCC
GCCAAGAGACCTGTCGCGAAAAAAACTGGAGCAAAGAATATTGCCCCCAC
GAAGAAAGCTGCTTCTTCAAAGAAATCTGCGTCTTCAAAGAAAACTACTC
CTGCAACGAAAGCTGTCGCTTCCAAAAAGACAGCTCCCAAAAGGGCCGCT
CTCAAAAAGAAGAGCACCCTGAAGAAGAAGTGAAGGATCGCACCCATGGC
CAAGCTGTCATCGATCACACGGTATCTAGGTTTCTTCTCGTCGCAGCACC
CATGTCATTTCATCGTTATCACTGCAACTTGCATCTCCTCGTGTATTTCA
CGACTCCATTCGTTATCAGCTCTCATCGCACGGTACGACTGCCTTTGtga
ggggatggaaagggcaTCATTTACTCGTTTCCCGTCTGACGCGTTGTCTT
CTTGGGGGGTTTCTTTCCCGCGTCGCGTCTCTGGATAGCACTTCTCATCC
AGCTGATCAAGGATTTCTTCGGCACGCGTCCTTCTAGATACATCATGGGG
GGAAAATAACTTCACTCAACAAATGAAAACATCATTCACACAATTATGGC
GGTTTTGTATCGCGCGCAAGTCTCATCGATTACGCCGCATGCCACGTCAT
TGCCATACCCTGCGCGTATGTATCATGGTGAAGCTCATCGCCGCGCGCAT
AACTTCCGTTGGACAGACACACCCTTCCGCACGCGGCACATCGCCTCCGC
TCTCGCGGTGCGTACTGAGAAGAACGGCCCGATGATTGATTGGCACATGT
AGAATGCACAAAAAAACTTTTCCACTTTCTGTGTGAGTAGTGTCTCCTTG
CGCGTGGTGTAACGCACTTACACCCACTCGACAGATGTAACGCCGCTTTG
AAATATGAACATGCTTCAGACCGTCCGTCGTCGGATCCAGCCACTTCCTG
TCCCGCGCCAACAGAAGCGAGGCCACTAATTACCAGGGTTCTACTTCGAA
CCCCCCGCTCAAATATTTGACCGCCCTAACCTGGCGATGGCTTTTGTTTT
GTGAGATCatactttcccctcctcaagATGGCGCTTCCTCGAAGTGGAAG
AACAGAGCACACATTCAACGAATAAAGAACACCAGAGGAAGCACAAGCTT
CCCATGTACATCATAAGATGTGATTTATGTAAATTTTG back to topCoding sequence (CDS) from alignment at CM002456.1:1003748..1005535+ >rna1032 ID=rna1032|Name=rna1032|organism=Nannochloropsis gaditana|type=CDS|length=1254bp|location=Sequence derived from alignment at CM002456.1:1003748..1005535+ (Nannochloropsis gaditana)
ATGTCGAAACCATCCAATTTCGACCTAATCAGGGAGGCCATCCTTGCTTT
GAAAGATCGCACaggctcctctcccgcggctATTAGGGCCTACTTGACAA
AAAATAGTCCCTCATTTCAGGACGACCATCACTTCAAAGCGGCTCTCAGG
TCGGGCGAAAAAACTGGAAAGTTGATCAAAGTCAAAGCGTCGTACAAGCT
GAGTGAGGCCGCCAAAAAAGTCGCGAAAGCGGTTAAGGCAGTCAAGAAGG
TGACGAAGAAAGCAAGCGCTGTGGCCAGGAAGAGCGCCCCCAAAGAGAAG
GTAGCATCCCTAAAAAGAGCTGCAGCTGGTCCCGCGCCGGCGAAGAAAGT
TGTTGCAAAGAAAAACTATGCCCCTGGAAAGAAGTCTTCAACAAAGAAAG
CGGTGCCTGCCAAGAAGAGAACTGCCGCAAAAAAATCCGCACCCGCCAAG
AGACCTGTCGCGAAAAAAACTGGAGCAAAGAATATTGCCCCCACGAAGAA
AGCTGCTTCTTCAAAGAAATCTGCGTCTTCAAAGAAAACTACTCCTGCAA
CGAAAGCTGTCGCTTCCAAAAAGACAGCTCCCAAAAGGGCCGCTCTCAAA
AAGAAGAGCACCCTGAAGAAGAAGTGAATGTCGAAACCATCCAATTTCGA
CCTAATCAGGGAGGCCATCCTTGCTTTGAAAGATCGCACaggctcctctc
ccgcggctATTAGGGCCTACTTGACAAAAAATAGTCCCTCATTTCAGGAC
GACCATCACTTCAAAGCGGCTCTCAGGTCGGGCGAAAAAACTGGAAAGTT
GATCAAAGTCAAAGCGTCGTACAAGCTGAGTGAGGCCGCCAAAAAAGTCG
CGAAAGCGGTTAAGGCAGTCAAGAAGGTGACGAAGAAAGCAAGCGCTGTG
GCCAGGAAGAGCGCCCCCAAAGAGAAGGTAGCATCCCTAAAAAGAGCTGC
AGCTGGTCCCGCGCCGGCGAAGAAAGTTGTTGCAAAGAAAAACTATGCCC
CTGGAAAGAAGTCTTCAACAAAGAAAGCGGTGCCTGCCAAGAAGAGAACT
GCCGCAAAAAAATCCGCACCCGCCAAGAGACCTGTCGCGAAAAAAACTGG
AGCAAAGAATATTGCCCCCACGAAGAAAGCTGCTTCTTCAAAGAAATCTG
CGTCTTCAAAGAAAACTACTCCTGCAACGAAAGCTGTCGCTTCCAAAAAG
ACAGCTCCCAAAAGGGCCGCTCTCAAAAAGAAGAGCACCCTGAAGAAGAA
GTGA back to top
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