EWM29678.1, cds997 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29678.1 vs. NCBI_GenBank
Match: gi|585112253|gb|EWM29678.1| (aatf protein [Nannochloropsis gaditana]) HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0 Query: 1 MAKVRGQLLRDIAALTTFGEGAEGYRDGDEDNYEDGTNARLAQYNNGWINGGDGGGDGTWVVEGEDGKSGSGASTGRSRLRMERAMDFVDEDERYRGKKVLRRALVDEDEDEDEDEDEGNGANSGPEGDEDVSSSEISSQQVSEDEHEKEPTLEEEMEKLRQNKGGMALLLKRSNDEQQLKAAQARKHRDMWNKLLEVRILLQRLLGMANRFPRDKAYDEYCRMDGSGETRAKFKEVSRGLRGLLETLQLLRDYMQAGAGGRVGGLAGLGRSSGRASRKKKVDTKASKGRKIRYSVHPKLEHFMFPVDPPCPTDRNRLFASLPGRGGRAAAAAEGEGTGGG 341 MAKVRGQLLRDIAALTTFGEGAEGYRDGDEDNYEDGTNARLAQYNNGWINGGDGGGDGTWVVEGEDGKSGSGASTGRSRLRMERAMDFVDEDERYRGKKVLRRALVDEDEDEDEDEDEGNGANSGPEGDEDVSSSEISSQQVSEDEHEKEPTLEEEMEKLRQNKGGMALLLKRSNDEQQLKAAQARKHRDMWNKLLEVRILLQRLLGMANRFPRDKAYDEYCRMDGSGETRAKFKEVSRGLRGLLETLQLLRDYMQAGAGGRVGGLAGLGRSSGRASRKKKVDTKASKGRKIRYSVHPKLEHFMFPVDPPCPTDRNRLFASLPGRGGRAAAAAEGEGTGGG Sbjct: 1 MAKVRGQLLRDIAALTTFGEGAEGYRDGDEDNYEDGTNARLAQYNNGWINGGDGGGDGTWVVEGEDGKSGSGASTGRSRLRMERAMDFVDEDERYRGKKVLRRALVDEDEDEDEDEDEGNGANSGPEGDEDVSSSEISSQQVSEDEHEKEPTLEEEMEKLRQNKGGMALLLKRSNDEQQLKAAQARKHRDMWNKLLEVRILLQRLLGMANRFPRDKAYDEYCRMDGSGETRAKFKEVSRGLRGLLETLQLLRDYMQAGAGGRVGGLAGLGRSSGRASRKKKVDTKASKGRKIRYSVHPKLEHFMFPVDPPCPTDRNRLFASLPGRGGRAAAAAEGEGTGGG 341
BLAST of EWM29678.1 vs. NCBI_GenBank
Match: gi|646709343|gb|KDR15251.1| (Protein AATF [Zootermopsis nevadensis]) HSP 1 Score: 68.9366 bits (167), Expect = 2.523e-9 Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 0 Query: 61 VVEGEDGKSGSGASTGRSRLRMERAMDFVDE-DERYRGKKVLRRALVDEDEDEDEDEDEGNGANSGPEGDEDVSS-SEISSQQVSEDEHEKEPTLEEEMEKLRQNKGGMALLLKRSNDEQQLKAAQARKHRDMWNKLLEVRILLQRLLGMANRFPRDKAYDEYCRMDGSGETRAKFKEVSRGLRGLLETLQLLR 252 VVE EDG S S R +R +D ++E DERY G K+ R+AL + D D DE E + S D +S E +Q+ S DE + L+ E + ++ + RS + + K R ++W+ LLE RI+LQ+ L AN+ P+ ++++ G E +A+ ++ + LLE+L R Sbjct: 37 VVENEDGFSDEEKSLNELR---KRNIDLIEEGDERYNGAKISRKALEMQGGDTD-DELESSKEGSSQADDSYISGGEEDENQEDSPDEINRNKVLQPEND---EDTNSFQHISCRSMETETEKGIAVRNQLNVWDCLLECRIMLQKTLTAANKLPQHNIFEQFT-AQGGPEFKAEIQQTIHTVTTLLESLIAFR 222
BLAST of EWM29678.1 vs. NCBI_GenBank
Match: gi|365761365|gb|EHN03024.1| (Bfr2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]) HSP 1 Score: 68.5514 bits (166), Expect = 4.243e-9 Identity = 76/282 (26.95%), Postives = 128/282 (45.39%), Query Frame = 0 Query: 34 EDGTNARLAQYNNGWINGGDGGGDGTWVVEGEDGKSGSGASTGRSRLRMERAMDFVDEDERYRGKKVLRRALVDEDEDEDEDEDEGNGANSGPEGDED--VSSSEISSQQVSEDEHEKEPTLEEEMEKLRQNKGGMALLLKRSNDEQQLKAAQA-----------RKHRDMWNKLLEVRILLQRLLGMANRFPRDKAYDEYCRMDGSGETRAKFKEVSRGLRGLLETLQLLRDYMQAGAGGRVGGLAGLGRSSGRASRK---KKVDTKASKGRKIRYSVHPK 299 ED NA L Q N GGD V E K +S+LR E+ ++ D +Y G K R+AL +E D++EDE+E + +G++D +S S + +EDE EK + +EME+ +Q + ++ L+++ + K +Q+ + +++ ++++RI LQ+ + ANR P + RMD S ET+ +E + L L R Q G + S + S K K+ DT S+ ++ R +V K Sbjct: 24 EDEENASLFQLNEK---GGDSDFSDNEDVNTEQAKKSHYLEVEKSKLRAEKGLEL--NDSKYTGVKGSRQALYNEFSDDEEDENEKSQEEENNDGEDDDALSFRTDSDDEQAEDE-EKSDSDGDEMEEAQQKRNALSKLVQQETKQAINKLSQSVQKDASKGYSILQQTKLFDNIIDLRIKLQKAVIAANRLPLTTESWKEARMDNSRETKHLLRENEKLFNKLFNQLINFRIKFQIGDHIAQSEEKAKHKISNKRSVKELYKETDTLDSELKEYRNAVLNK 299
BLAST of EWM29678.1 vs. NCBI_GenBank
Match: gi|401841931|gb|EJT44238.1| (BFR2-like protein [Saccharomyces kudriavzevii IFO 1802]) HSP 1 Score: 68.1662 bits (165), Expect = 5.986e-9 Identity = 76/282 (26.95%), Postives = 128/282 (45.39%), Query Frame = 0 Query: 34 EDGTNARLAQYNNGWINGGDGGGDGTWVVEGEDGKSGSGASTGRSRLRMERAMDFVDEDERYRGKKVLRRALVDEDEDEDEDEDEGNGANSGPEGDED--VSSSEISSQQVSEDEHEKEPTLEEEMEKLRQNKGGMALLLKRSNDEQQLKAAQA-----------RKHRDMWNKLLEVRILLQRLLGMANRFPRDKAYDEYCRMDGSGETRAKFKEVSRGLRGLLETLQLLRDYMQAGAGGRVGGLAGLGRSSGRASRK---KKVDTKASKGRKIRYSVHPK 299 ED NA L Q+N GG+ V E K +S+LR E+ ++ D +Y G K R+AL +E D++EDE+E + +G++D +S S + +EDE EK + +EME+ +Q + ++ L+++ K +Q+ + +++ ++++RI LQ+ + ANR P + RMD S ET+ KE + L L R Q G + S + S K K+ DT S+ ++ R +V K Sbjct: 24 EDEENASLFQHNEK---GGESDFSDNEDVNTEQAKKSHYLEVEKSKLRAEKGLEL--NDSKYTGVKGSRQALYNEFSDDEEDENEKSQEEENNDGEDDDALSFRTDSDDEQAEDE-EKSDSDGDEMEEAQQKRNALSKLVQQETKRAINKLSQSVQKDASKGYSILQQTKLFDNIIDLRIKLQKAVIAANRLPLTTESWKEARMDNSRETKHLLKENEKLFNKLFNQLINFRIKFQIGDHIAQSEEKAKHKISNKRSVKELYKETDTLDSELKEYRNAVLNK 299
BLAST of EWM29678.1 vs. NCBI_GenBank
Match: gi|240278012|gb|EER41519.1| (bfr2 [Histoplasma capsulatum H143]) HSP 1 Score: 65.855 bits (159), Expect = 2.304e-8 Identity = 77/272 (28.31%), Postives = 117/272 (43.01%), Query Frame = 0 Query: 82 MERAMDFVDEDERYRGKKVLRRALVDEDEDEDEDEDEGNGANSGPEGDEDVSSSEISSQQVSEDEHEKEPTLEEEMEKLRQ----NKGGMALLLKRSNDEQQLKAAQARKHRDMWNKLLEVRILLQRLLGMANRF---PRDKAYDEYCRM----DGSGETRAKFKEV---SRGLRGLLETLQLLRDYMQAGAGGRVGGLAGLGRSSGRASR-------KKKVDTKASKGRKIRYSVHPKLEHFMFPVDPPCPTDRNR--LFASLPGRGGRAA 330 M + D +DE E R V ED + E ED +G SG E D S + S D+ P ++ ++R+ + +A L ++ K + ++ R + +L RI LQR + + N P + + + +G+ + EV S + LL L+ + M A +G + R + + K+ VDTKASKGRK+RY+VH KL++FM P D DR R FASL GR RA Sbjct: 106 MSESADELDESENGR---------VGEDSSDAESEDMDHGLRSGGELDGVTDSEDDQEFGDSNDDETSAPAASDDRAEIRRLMASDHKTVATSLSQAVKADAAKGSAIKRQRSAFGAILNARIKLQRGITILNELDSHPSKRTMTDKVQQLKQPNGTAGASHELNEVYNDSSFYQALLR--DLVEERMSANSGVEALQMQLPSRLATHPTTGMRKDKVKRSVDTKASKGRKMRYTVHEKLQNFMPPEDRGTWGDRAREEFFASLLGRSARAV 366
BLAST of EWM29678.1 vs. NCBI_GenBank
Match: gi|1183325317|gb|ORX55087.1| (hypothetical protein DM01DRAFT_1335384 [Hesseltinella vesiculosa]) HSP 1 Score: 61.6178 bits (148), Expect = 4.960e-7 Identity = 54/190 (28.42%), Postives = 93/190 (48.95%), Query Frame = 0 Query: 62 VEGEDGKSGSGASTGRSRLRMERAMDFVDEDERYRGKKVLRRALVDEDEDED-----EDEDEGNGANSGPEGDEDVSSSEISSQQVSEDEHEKEPTLEEEMEKLRQNKGGMALLLKRSNDEQQLKAAQARKHRDMWNKLLEVRILLQRLLGMANRFPRDKAYDEYC--RMDGSGETRAKFKEVSRGLRGL 244 +E DG+S G+S LR + + + +D RY G++ R+ L ++ D D +DE GA D E S ED+ +++ L EE++K+++ + M L +S + K R+ +W+ +LEVRI +Q+++ ANR P+ +DE D ET+A+ ++V L L Sbjct: 44 MEEHDGRSHY-VKMGKSSLRNNQPL--LMDDPRYSGERTSRKELYSDESDSDTEGYDQDETVPFGAVDDDSEGSDDDDDEQFSSDAEEDDPQEDQALTEELQKIQEEEKTMLQQLTKSASDDVEKGQHVRQQLTLWDNVLEVRIRMQKVVENANRLPQHDRWDEIKDEMSDDINETKAELRQVLDDLMEL 230 The following BLAST results are available for this feature:
BLAST of EWM29678.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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