EWM29676.1, cds996 (CDS) Nannochloropsis gaditana

Overview
NameEWM29676.1
Unique Namecds996
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:924865..928527 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29676.1
Productzinc finger ran-binding domain-containing protein 3
Orig transcript idgnl|cribi|Naga_100299g2.1138.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:924865..928527 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR010003HARP_dom
IPR000330SNF2_N
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Homology
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|585112251|gb|EWM29676.1| (zinc finger ran-binding domain-containing protein 3 [Nannochloropsis gaditana])

HSP 1 Score: 2477.97 bits (6421), Expect = 0.000e+0
Identity = 1220/1220 (100.00%), Postives = 1220/1220 (100.00%), Query Frame = 0
Query:    1 MDTATLQNSRPLIVSQDVSAMQVDGCRLDHEAPGRRTSPPPWEHEKQNSRGQEQTAPHVQRHEDLAIDLTLNDSEDGGDGSSCDFERTENGERHVGAPRSQQQQAQQPRSTAPSAHGPNAGSGYDDVQLNFSQYGQPDCIQQTQFTPTQELAGHGRQGGRQQDEQAGALGSRGRDGAGASIIPMPLAMAATPNEHLRLRHQAFLAEQEFYRQQEFYRRGRPWNRAPEVPSVPTLPGHMRVQPPLGLGSVQLGGYPLPYYPAYVQSRGMGVTGGVASSASADKYGVMGRIGTIERPSYVSVAPSIHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRRTFHKLTVPEQAIRGKLEGALEALSIVSATAKKRARKRSRRQAEGGGEESEDLYATLARQRREQRARESGTGAVPPGGEEGKGVAGAGANRQSVEASQGEGEMGEPGSGVAMEDWSAREIQQRKKVLLMEVFRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIEDGCLRDVPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGELVEGAEGLDLEAREEGGTGGAKGGGKVKEEEGGREEVSVGGAKKTGEKKGEMEEDDWEKKKEIRGAWEGLEGEEAEEKAEEEAEGKEESGKGSWRVDKKTGNAAMAKLLISTEGKMREAKEERLESAEDSGPLSDKSESILRELAQEDRDRWKGGSDTEEEDDEDADDADWESSGLDDSSVGSSEEGVCELVTIDDDGDEEQGKERPGPQGELGNDTRLQFSMTSCPAPEITSHHQEGYEKMRDVKSSRDNGIGGESAEVIVLDDT 1220
            MDTATLQNSRPLIVSQDVSAMQVDGCRLDHEAPGRRTSPPPWEHEKQNSRGQEQTAPHVQRHEDLAIDLTLNDSEDGGDGSSCDFERTENGERHVGAPRSQQQQAQQPRSTAPSAHGPNAGSGYDDVQLNFSQYGQPDCIQQTQFTPTQELAGHGRQGGRQQDEQAGALGSRGRDGAGASIIPMPLAMAATPNEHLRLRHQAFLAEQEFYRQQEFYRRGRPWNRAPEVPSVPTLPGHMRVQPPLGLGSVQLGGYPLPYYPAYVQSRGMGVTGGVASSASADKYGVMGRIGTIERPSYVSVAPSIHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRRTFHKLTVPEQAIRGKLEGALEALSIVSATAKKRARKRSRRQAEGGGEESEDLYATLARQRREQRARESGTGAVPPGGEEGKGVAGAGANRQSVEASQGEGEMGEPGSGVAMEDWSAREIQQRKKVLLMEVFRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIEDGCLRDVPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGELVEGAEGLDLEAREEGGTGGAKGGGKVKEEEGGREEVSVGGAKKTGEKKGEMEEDDWEKKKEIRGAWEGLEGEEAEEKAEEEAEGKEESGKGSWRVDKKTGNAAMAKLLISTEGKMREAKEERLESAEDSGPLSDKSESILRELAQEDRDRWKGGSDTEEEDDEDADDADWESSGLDDSSVGSSEEGVCELVTIDDDGDEEQGKERPGPQGELGNDTRLQFSMTSCPAPEITSHHQEGYEKMRDVKSSRDNGIGGESAEVIVLDDT
Sbjct:    1 MDTATLQNSRPLIVSQDVSAMQVDGCRLDHEAPGRRTSPPPWEHEKQNSRGQEQTAPHVQRHEDLAIDLTLNDSEDGGDGSSCDFERTENGERHVGAPRSQQQQAQQPRSTAPSAHGPNAGSGYDDVQLNFSQYGQPDCIQQTQFTPTQELAGHGRQGGRQQDEQAGALGSRGRDGAGASIIPMPLAMAATPNEHLRLRHQAFLAEQEFYRQQEFYRRGRPWNRAPEVPSVPTLPGHMRVQPPLGLGSVQLGGYPLPYYPAYVQSRGMGVTGGVASSASADKYGVMGRIGTIERPSYVSVAPSIHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRRTFHKLTVPEQAIRGKLEGALEALSIVSATAKKRARKRSRRQAEGGGEESEDLYATLARQRREQRARESGTGAVPPGGEEGKGVAGAGANRQSVEASQGEGEMGEPGSGVAMEDWSAREIQQRKKVLLMEVFRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIEDGCLRDVPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGELVEGAEGLDLEAREEGGTGGAKGGGKVKEEEGGREEVSVGGAKKTGEKKGEMEEDDWEKKKEIRGAWEGLEGEEAEEKAEEEAEGKEESGKGSWRVDKKTGNAAMAKLLISTEGKMREAKEERLESAEDSGPLSDKSESILRELAQEDRDRWKGGSDTEEEDDEDADDADWESSGLDDSSVGSSEEGVCELVTIDDDGDEEQGKERPGPQGELGNDTRLQFSMTSCPAPEITSHHQEGYEKMRDVKSSRDNGIGGESAEVIVLDDT 1220          
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|299472392|emb|CBN77580.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 515.383 bits (1326), Expect = 5.532e-161
Identity = 303/692 (43.79%), Postives = 424/692 (61.27%), Query Frame = 0
Query:  301 APSIHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLG-KLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHE-TSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRRTFHKLTVPEQAIRGKLEGALEALSIVSATAKKRARKRSRRQAEGGGEESEDLYATLARQR-----------REQRARESGTGAVPPGGEEGKGVAGAGANR------------------QSVEASQGEGEMGEPGSGVAMEDWSAREIQQRKKVLLMEVFRLTGTAKIPLAVDRVKALLASELSG-KFLVFAHHMNVMNGIEDGCLRD--VPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGELVEG 958
            A ++ F++ S   F A++  P P +V + F+LTPGA + + +RRW FPL AH NL  A   L RQ     GV +   P+P   L   ++  + E+ A+ E  K+   KL  K++P  + + LAPFQ++GV FV+ +EGR +IADEMGLGKTIQAI  A  Y++EWPLL++ PSSARYHW+ ELLKWLD D + K++I VV   ++ L+   +KVVI+SY L  R+KE L                  F VVV DECHYLKN  A RT+ ++PL  +A RAILLSGTPALSRP EL+TQLN+L+   W+    F +RYC G +G+       K+     GA+++ ELH +L+ATVMVRR KK+IL  LPPK+R+  ++ V ++  R +L+   + LS+++     R  + ++  A+   E  E   +  ++ +           R + +  S T A    G   +   G GA R                   S       G++ EP +   + D +  E+ Q ++ LLM++F  TGTAKIP  +  V  +LA E++G K LVFAHH NV++ +E   +R   V +IRIDG T P +RQ  VDTFQ++  VRVALL LTAAG+ +TLTAASRV+FAEL+WTP  LLQAEDRCHRIGQ + V+V+YL+A+G+LDDALWPLI+ K+++LGE+VEG
Sbjct:   57 AGTVTFSLISTSFFTAKIRKPTPAAVHTYFKLTPGATYDEKERRWKFPLGAHENLAGA---LSRQ-----GVQVV--PVPRQALAAATLAVEPEQGADGE--KEPPVKLCEKMVPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQAICCAAAYESEWPLLIVSPSSARYHWQHELLKWLDEDSITKKQIVVVSKSKQDLNRGVTKVVIISYELVNRMKEEL--------------DLFNFGVVVCDECHYLKNQRAARTRAIVPLATKARRAILLSGTPALSRPSELFTQLNLLSAATWASFRDFGKRYCAGKKGKGKK---GKFGADFSGASHIAELHALLRATVMVRRLKKNILKHLPPKQRSLVEVHVQDEGARRELQ---QDLSVLATRHHARLGRLAKTHADKPSEIVESGSSASSQSKDASPSAAAVVARPKTSNPSRTDAPKGKGNGRQPKVGPGAGRVTKLSALPPAPVSKEVTVPSSTQDSTNGDVAEPPTR-DVADMTKAELAQERRSLLMKLFANTGTAKIPAVIRHVSDVLADEMTGGKILVFAHHRNVLDALEQSVVRTGRVEYIRIDGRTKPKDRQDLVDTFQSNPSVRVALLGLTAAGIGITLTAASRVVFAELYWTPAQLLQAEDRCHRIGQATVVKVQYLVAKGSLDDALWPLIQEKIKLLGEMVEG 715          
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|676395707|ref|XP_009041131.1| (hypothetical protein AURANDRAFT_39147, partial [Aureococcus anophagefferens] >gi|323448244|gb|EGB04145.1| hypothetical protein AURANDRAFT_39147, partial [Aureococcus anophagefferens])

HSP 1 Score: 434.491 bits (1116), Expect = 4.703e-134
Identity = 272/665 (40.90%), Postives = 365/665 (54.89%), Query Frame = 0
Query:  304 IHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSI-QTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWL-DRDVLKKEEIQVVKAGRERLHETS-----KVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRG----RKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRRTFHKLTVPEQAIRGKLEGALEALSIVSATAKKRARKRSRRQAEGGGEESEDLYATLARQRREQRARESGTGAVPPGGEEGKGVAGAGANRQSVEASQG-EGEMGEPGSGVAMEDWSAREIQQRKKVLLMEVFRLTGTAKIPLAVDRVKALLA----SELSGKFLVFAHHMNVMNGIEDGCLRDVPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVL 952
            +  +V+S   F       +P + ++  R TPGA  K ++  W  PL+ H N CVA+   R          +    IP  VL  L+  Q D                    +PR +  ALAPFQ+ GVS++V   GR L+ADE GLGKTIQAI  AC Y  EWP+LV+ PSSAR+HWEAE L+WL D D L ++ I V+ +  ER+  T+     K+++ SY L      V R  VR     V         V++ DECHYLKN  AQRTK LLP++  + RAILLSGTPALSRP E++ QL+ L+ + W+D + F +RYC+G R     + T+  G+K +     A+NL ELH +L+AT+M+RR K  ILT LPPKRR   K+++ + ++  +L   LE             R R+   AE    +         R     +     T +    G        A   R+ +++ +    EM      + ME                 +FR +G AK+P    R+  LL        SGK LVFAHH  V++ + +G LRD+ +IRIDG+TP  +RQ+RV TFQ D  VRVALL +TAAG+ALTLTAASRV+F EL+WTP ALLQAEDR HRIGQTSEV VEYLLA   +D+ LWPLI+ KM +L
Sbjct:  102 LTLSVASPSTFKITCESTLPPACVTIARSTPGAVLKDNQ--WELPLSQHVNFCVAMQNER----------IVCERIPQRVLASLATAQLD--------------------IPRSIWNALAPFQKYGVSWIVRNNGRALLADEPGLGKTIQAIGAACAYYHEWPVLVVSPSSARFHWEAEFLQWLPDEDYLPRDGILVITS--ERIAATTAVDRAKILVTSYDL------VHREAVRKTLTRVAP------NVIICDECHYLKNGKAQRTKALLPIIKASRRAILLSGTPALSRPMEVFWQLHALDDKQWTDPADFNKRYCSGRRKKDDPKDTNEDGEK-KKEYSAASNLEELHTLLRATLMLRRNKASILTQLPPKRRVQRKVSIDDVSLALELRSDLEEF-----------RARASELAELSNNQKRARRKRSKRSWLGVKEDTHVTLSTTLSGY-------ATIEREDLQSPEMVRKEMAAKKKALLME-----------------LFRRSGPAKLPAIERRISDLLHGVDEERFSGKMLVFAHHRKVLDTLANGILRDIKYIRIDGTTPAKDRQSRVTTFQNDAKVRVALLGITAAGIALTLTAASRVIFTELYWTPAALLQAEDRAHRIGQTSEVVVEYLLADDCVDEILWPLIQHKMLML 684          
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|1210524218|dbj|GAX16947.1| (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Fistulifera solaris])

HSP 1 Score: 371.703 bits (953), Expect = 5.047e-105
Identity = 247/674 (36.65%), Postives = 336/674 (49.85%), Query Frame = 0
Query:  344 RWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWL-------------DRDVLKKEEIQVVKAGRERLH--ETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRA---WSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRR---TFHKLTVPEQAIRGKLEGALEALSIVSATAKKRARKRSRRQAEG--GGEESEDLYATLAR---QRREQRARESGTGAVPPGGEEGKGVAGAGANRQSVEASQG-----------------EGEMGEPGSGVAM---EDWSAREIQQRKKVLLMEVFRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIED-GCLRD------VPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGELVEGAEGLDL 964
            +W  PL A++             +  +  +  +  IP   L+  S+    ER  +++    A     K LP RL +ALAPFQR GV FV+ ++GR +IAD+MGLGKTIQAIA   +Y  EWPLLV+CPSSARYHWE+E L WL             D   L   +I V+   ++ +   +++KVVI SY L   L       V S  +  G      F   + DE H LKN  ++RT  LLP+L    R +LLSGTPAL+RP ELW QL +L       W D ++F+ +Y   G    ++                 ELH ML  T+M+RR K DIL  LP K R   +F  L   EQ    +    L  L     T  + AR        G  G   ++ +  +L+    Q   Q A +S    V     EG+       N+ S + SQ                  E ++ +    +A    ++   +   +R +V L  ++  TG  KIPL VD +K  L     GK  +FAHH++V++ I D   L +         IRIDGST P +RQ ++  FQ D   R+ALL +TAAG+A+TLTA+S V FAELFWTP  ++QAEDRCHRIGQ + V   Y +ARGT+DD LW LI +K   LGE VEG E   L
Sbjct:  562 KWRIPLGAYHAFA---------SFLRSDPLTTVEGIPQHQLQVASV----ERARQAQGYPSAEQLQEKGLPLRLAKALAPFQRGGVDFVLSKDGRAMIADDMGLGKTIQAIASMSIYFQEWPLLVLCPSSARYHWESEFLLWLGEGTMADDDNFHEDNSCLSPSQINVLSTSKDEIFPSQSTKVVICSYGLVTTL-------VESRKITPG-----MFDCAIVDESHMLKNKSSKRTSRLLPVLTATKRCVLLSGTPALARPAELWPQLLILGTERHGWWDDEAAFVDKYVRNGSAESSA-----------------ELHTMLTGTIMIRRLKADILKSLPRKLREKASFQILGPDEQV---EFRDLLAKLRQGKGTLGQLARIEHHLSITGPNGSNNAQTIAGSLSTEPVQGEIQDAIKSLEAQVERSEMEGRIRIQTTLNQVSHQLSQDRYDFLKMQLETDFNSRIESQLKQGMDAIASRFGQNLLNQNESKRTRV-LARLYERTGQVKIPLVVDLLKRWLNDPTKGKLCIFAHHISVLDAIRDLANLSNRESDGKCKFIRIDGSTNPKQRQEQIQIFQNDPTTRIALLGITAAGVAVTLTASSTVWFAELFWTPAIMIQAEDRCHRIGQQARVRCLYFVARGTIDDILWRLIEKKFTDLGEFVEGKENHKL 1189          
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|553194286|ref|XP_005855921.1| (hypothetical protein NGA_2117400, partial [Nannochloropsis gaditana CCMP526] >gi|422293142|gb|EKU20442.1| hypothetical protein NGA_2117400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 223.402 bits (568), Expect = 1.603e-64
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
Query:  527 LRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQG 633
            LRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQG
Sbjct:    1 LRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQG 107          
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|1005952902|ref|XP_015784832.1| (PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Tetranychus urticae])

HSP 1 Score: 243.432 bits (620), Expect = 3.089e-64
Identity = 142/386 (36.79%), Postives = 215/386 (55.70%), Query Frame = 0
Query:  298 VSVAPSIHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRR--TFHKLTVPEQA 681
            V V  ++ F + S   F   ++ P    ++   R  PG+      R W+F L  + NL   + +L++ +  E  +   L  IP  V++ L        L E++  K   D L  +LP+RL EAL PFQ++GV+F + R GR LI D+MGLGKTIQAIA++  ++ +WPLL++CPSS R+ W+  + +WLD  V +  +I VV  GR+ +   +++VI+SY L LR+K     P  +            F+ ++ DE H++KN  AQRTK  L L+    R +LLSGTPALSRP EL+TQL  ++ + ++    F  RYC G           +W    +G +N  EL  +L+ T+M+RR K D+L  LPPKRR      +T+P++A
Sbjct:   79 VPVRVAVKFILKSKDRF--EMSFPYNPVIVEVCRAIPGSNFDSKTRNWHFELQHYRNLLSNLTKLKQTNNIELDL---LQGIPEFVIQAL--------LKETKRPKSTID-LSAVLPKRLFEALYPFQKDGVAFAISRNGRCLIGDDMGLGKTIQAIAISYYFRDDWPLLIVCPSSLRFQWKRSIGEWLDC-VREDIDIDVVVDGRKDI-PVNRIVIISYDLLLRVK-----PDTANS----------FKSIILDESHFIKNDAAQRTKTALKLIKACKRVLLLSGTPALSRPMELFTQLQAVDPKTFAKKHDFGMRYCDGK--------ATQWGYDYRGTSNPDELRILLETTIMIRRLKVDVLQELPPKRRAVVMLDITLPQKA 425          

HSP 2 Score: 133.265 bits (334), Expect = 4.072e-28
Identity = 65/135 (48.15%), Postives = 90/135 (66.67%), Query Frame = 0
Query:  823 ELSGKFLVFAHHMNVMNGIEDGCLRD--VPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGEL 955
            E   KF+ FAHH  +++ I    L +  V +IRIDGSTP   RQ   D FQ     +VA++ +T+AG+ +TLTAA  V+FAEL++ PG L QAEDR HRIGQ   V ++YL+A  T+DD +WPLI +K +VL ++
Sbjct:  477 EQDKKFICFAHHKVMLDSIC-SVLEEQRVSYIRIDGSTPSECRQECCDYFQNQEKCKVAVIGITSAGMGITLTAAQLVVFAELYFNPGVLTQAEDRAHRIGQKDSVLIQYLIAPATVDDHIWPLINQKFKVLNKV 610          
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|156407998|ref|XP_001641644.1| (predicted protein [Nematostella vectensis] >gi|156228783|gb|EDO49581.1| predicted protein, partial [Nematostella vectensis])

HSP 1 Score: 229.565 bits (584), Expect = 3.547e-61
Identity = 133/345 (38.55%), Postives = 187/345 (54.20%), Query Frame = 0
Query:  326 VLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRR 670
            +++ F+  P   + K+   W F L  +  L  A   L         V ++L  +P  VL   +  + G   + S       D     +  +L+ +L PFQREGV+F + ++GR +IAD+MGLGKT+QAI VA  Y+ EWPLLV+ PSS R  W+   +KWL    L  + I VV  G++ +     + I+SY L  +               VG  Q+ RFRV++ADE H++KN  A RTK  LP+L  ATR ILLSGTPALSRP EL+TQ+  +N R +     F +RYC G   R        W     GA+N+ EL  +L+ ++M+RR KKD+L  LP KRR
Sbjct:   18 LIALFKTLPSRAYDKATTTWSFSLEDYETLMSASRDL---------VGVSLEGLPKTVLSLFTKSSPGTLKSLS-----TEDINLNCVDTKLVSSLMPFQREGVAFCICQDGRAIIADDMGLGKTVQAICVASYYRKEWPLLVVAPSSMRLTWKQAFIKWLPS--LDPQSINVVLTGKDNV-TAGLINIISYDLLTKF--------------VGKLQEKRFRVIIADESHFIKNNKAARTKTFLPILKAATRVILLSGTPALSRPEELYTQICAVNPRMFPSFHEFGKRYCAGVENR--------WGWDYSGASNMEELQLVLEQSIMIRRLKKDVLHQLPSKRR 323          

HSP 2 Score: 152.14 bits (383), Expect = 5.863e-35
Identity = 84/176 (47.73%), Postives = 111/176 (63.07%), Query Frame = 0
Query:  785 SAREIQQRKKV----LLMEVFRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIEDGCL--RDVPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGE 954
            +A+E++  KK      L+  F  T  +KI    + V  LL  E   KFLVF HH ++++ I D CL  +   +IRIDG TP  +RQ   D FQ D    VA+LS+TAA   LTLT  + V+FAELFW PGAL+QAEDR +RIGQ + V + YL+A+GT DD LWPLI+ K+ VL +
Sbjct:  341 AAKEVETAKKKEQHGALLNYFCETSASKIAAVRNYVLDLL--EGGHKFLVFGHHQDMLDAISD-CLMHKKYSYIRIDGKTPSSKRQMLCDQFQKDKNTVVAVLSITAANTGLTLTEGTAVVFAELFWNPGALVQAEDRVYRIGQKNSVNIHYLVAKGTADDYLWPLIQHKLDVLSK 513          
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|551646453|ref|XP_005826013.1| (hypothetical protein GUITHDRAFT_76774, partial [Guillardia theta CCMP2712] >gi|428170105|gb|EKX39033.1| hypothetical protein GUITHDRAFT_76774, partial [Guillardia theta CCMP2712])

HSP 1 Score: 228.024 bits (580), Expect = 9.856e-61
Identity = 132/330 (40.00%), Postives = 188/330 (56.97%), Query Frame = 0
Query:  342 KRRWYFPLTAHNNLCVAVDQLRRQHYRE-TGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRR 670
             +RW FPL  +  L   V+++ R +  +      +L+P+P +V + L        L  ++++      L + LP  + + L PFQREGV F + REGR LI DEMGLGKT+QAIA+A  Y  EWPLL++CPSS R  W  EL+ WL  + L  +++  + +GR+ +     V I+SY L  +      AP  S+          +F+V++ DE HYLKN  A+R+K +LP +  A R+ILL+GTPALSRP EL+  LN L+ R +++   F  RYC   +G         +     GA+NL ELH +L    MVRR KKD+LT LP KRR
Sbjct:    8 NKRWVFPLCQYYKL---VNEISRMNATQPANSTFSLTPVPENVFKVLKNDPSVSTLNHTKAKM-----LLEALPLTISKKLLPFQREGVLFGLAREGRVLIGDEMGLGKTVQAIAIAAAYLDEWPLLIVCPSSMRCMWAQELVNWLPGE-LTPQDVNTIFSGRDVVG-NQLVTIISYDLFCKF-----APEISS---------MQFKVIIGDESHYLKNPNAKRSKTILPFIRSARRSILLTGTPALSRPVELFNLLNSLHPRLFNNFLEFAYRYCDAHQG--------PFGLETSGASNLEELHVLLDQHTMVRRLKKDVLTQLPAKRR 305          

HSP 2 Score: 176.407 bits (446), Expect = 3.009e-43
Identity = 96/179 (53.63%), Postives = 124/179 (69.27%), Query Frame = 0
Query:  782 EDWSAR-EIQQRKKVLLMEVFRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIEDGCLRD-VPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGELVEG 958
            ED  AR   Q RKK L+M+++  TG AK+    + V  L+  E   KFLVFAHHM +++G+ED   +  V +IRIDGSTP  ERQ RV +FQ  + VRVA+LS+TAAG  LTLTAA+ V+FAEL WTPG LLQAEDR HRIGQ S V V YL+ +GT D+ +W  I  K++V+G  ++G
Sbjct:  339 EDSEARFRAQSRKKALIMKMYVDTGVAKLQAIQEYVADLI--ECGAKFLVFAHHMEILDGLEDVVSKKKVQYIRIDGSTPSRERQLRVSSFQESSSVRVAILSVTAAGTGLTLTAANLVVFAELHWTPGILLQAEDRAHRIGQQSSVNVMYLVGQGTCDELIWDSISYKVKVIGRALDG 515          
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|551653206|ref|XP_005829381.1| (hypothetical protein GUITHDRAFT_141340 [Guillardia theta CCMP2712] >gi|428173499|gb|EKX42401.1| hypothetical protein GUITHDRAFT_141340 [Guillardia theta CCMP2712])

HSP 1 Score: 224.172 bits (570), Expect = 2.749e-59
Identity = 140/392 (35.71%), Postives = 209/392 (53.32%), Query Frame = 0
Query:  326 VLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRRTFHKLTVPEQ---AIRGKLEGALEALSIVSATAKKRARKRSRRQAEG 714
            V++ F+      +    R W F ++ H+ L  ++ +            +++ P+P   L+ L           SE     H  + + LP  LL  L PFQREG++F +   GR LI DEMGLGKT+QAIA+A  Y+ EWPLL++ PS  R  W+ EL+KWL +DV   E++ V+ +G++++    K+ I+SY L L+  E L               +    V++ADE H+LK++ A+RTK +LPL+ +  RAILL+GTPALSRP EL+TQ++ L  + +   + F  RYC    GR        W     GA+NL EL  +L   VM+RR K ++LT LP KRR    +   ++   A + KLE   E  S+ +     RA    R+ A+G
Sbjct:   17 VINIFKEMKTRSYNPQSREWSFHVSEHDELVSSLSKCSN---------VSVKPLPATFLKALRELESQSSAVSSEMVSLEH--IWQALPPDLLAGLLPFQREGIAFAIRHGGRALIGDEMGLGKTVQAIAIAKYYEKEWPLLIVTPSPLRLVWKQELMKWL-KDV-DHEDVNVIMSGKDQM--GGKITIISYDLFLKFTEEL--------------SKMSINVLIADESHFLKSSSAKRTKAILPLIRKVRRAILLTGTPALSRPSELYTQISSLRPKLFGSWNEFAYRYCDAKPGR--------WALDASGASNLSELRCLLN-DVMIRRLKSEVLTQLPSKRRQQIWVQTSKEANAAFKKKLE---EMQSLNAIVMNNRAAPEERKNAKG 367          

HSP 2 Score: 139.428 bits (350), Expect = 9.358e-31
Identity = 82/187 (43.85%), Postives = 112/187 (59.89%), Query Frame = 0
Query:  794 KVLLMEVFRLTGTAKIPLAVDRVKALLASELSG--KFLVFAHHMNVMNGIEDGCLRDVPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGELVE-------GAEGLDLEAREEGG 971
            ++L+ ++++ TG  K+      VK  LA+ + G  KFLVF HH      IED    + PH R   ST   ER   VD FQ D  +  A+LS+TAAG  LT TAA+ V+FAEL WTPG ++QAEDR HRIGQ   V + Y+LA+G++DD +WP I +K+ V+G  ++       G E + L   EEGG
Sbjct:  370 QLLMNQLYKETGAEKLA----AVKEYLATMVDGGGKFLVFGHH------IED---EEHPHRR---STSMSERARLVDAFQKDPDISAAVLSVTAAGTGLTFTAANAVVFAELHWTPGVMMQAEDRVHRIGQQYSVNIHYMLAKGSVDDIMWPCIEKKLNVVGNALDGQGVGNFGGESITLGEGEEGG 540          
BLAST of EWM29676.1 vs. NCBI_GenBank
Match: gi|942193613|ref|XP_006006236.2| (PREDICTED: DNA annealing helicase and endonuclease ZRANB3-like, partial [Latimeria chalumnae])

HSP 1 Score: 211.075 bits (536), Expect = 7.139e-58
Identity = 119/280 (42.50%), Postives = 168/280 (60.00%), Query Frame = 0
Query:  390 QTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRER-LHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPK 668
            Q D + + + +  K   D    LLP +L + L PFQREGV F +++ GR +IADEMGLGKTIQAIAVAC Y+ EWPLL++ PSS +Y W  E+ KW+    L  ++  +++   +     TSKV IL Y L              A + V    +  F VV+ DE HY+K+  A R+K L+P++  A+RAILL+GTPALSRP EL+ Q++ L  R +   SS+ ++YC           GK+ Q   +GA+NL ELH+ L  ++M+RR K ++LT LPPK
Sbjct:    5 QGDCQSVVQVKKSKNEFDDQLLLLPEKLRQRLLPFQREGVRFALEKAGRCMIADEMGLGKTIQAIAVACFYREEWPLLIIVPSSLKYPWIEEMEKWVPE--LNPDDFNLIENKTDIGKIPTSKVTILGYGLL----------TTDARMLVDALCKQNFEVVIVDESHYMKSRNAARSKILVPIVQNASRAILLTGTPALSRPEELFMQIDALYPRRFGTWSSYAKQYCNA----HVRYFGKRVQWDCKGASNLDELHKRLN-SIMIRRLKDEVLTQLPPK 267          
The following BLAST results are available for this feature:
BLAST of EWM29676.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112251|gb|EWM29676.1|0.000e+0100.00zinc finger ran-binding domain-containing protein ... [more]
gi|299472392|emb|CBN77580.1|5.532e-16143.79conserved unknown protein [Ectocarpus siliculosus][more]
gi|676395707|ref|XP_009041131.1|4.703e-13440.90hypothetical protein AURANDRAFT_39147, partial [Au... [more]
gi|1210524218|dbj|GAX16947.1|5.047e-10536.65SWI/SNF-related matrix-associated actin-dependent ... [more]
gi|553194286|ref|XP_005855921.1|1.603e-64100.00hypothetical protein NGA_2117400, partial [Nannoch... [more]
gi|1005952902|ref|XP_015784832.1|3.089e-6436.79PREDICTED: SWI/SNF-related matrix-associated actin... [more]
gi|156407998|ref|XP_001641644.1|3.547e-6138.55predicted protein [Nematostella vectensis] >gi|156... [more]
gi|551646453|ref|XP_005826013.1|9.856e-6140.00hypothetical protein GUITHDRAFT_76774, partial [Gu... [more]
gi|551653206|ref|XP_005829381.1|2.749e-5935.71hypothetical protein GUITHDRAFT_141340 [Guillardia... [more]
gi|942193613|ref|XP_006006236.2|7.139e-5842.50PREDICTED: DNA annealing helicase and endonuclease... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna997rna997Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications