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Properties
| Property Name | Value |
|---|
| Product | zinc finger ran-binding domain-containing protein 3 |
| Orig transcript id | gnl|cribi|Naga_100299g2.1138.mrna |
| Orig protein id | gnl|cribi|Naga_100299g2.1138 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:924744..929013 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna997 ID=rna997|Name=rna997|organism=Nannochloropsis gaditana|type=mRNA|length=1023bp
ATGACGCGGGCACTTTGCGGCAGCCATCAGAGATGCGCAAGCAGAGGGCC
GGTTGGTGGCGCTGTGACATGCCCTCTCCTCCTGCTCCTCAAAATTCTGG
TATTCGTGATGTATATATCCCCGTCCCCCAGATCCGTGCATGCAAGCCAT
CATCAGCCTGCAATGAATGTCGCAGCAGTCATAGGAGCTCCTTTTATTGG
CCGCCGTTCTGGTGAAACCTGTCCAGGCCGGCGCGCCCCGGGTACAGTAT
GCCCTCCCTCGTCCCGCTTGGTATTAGCTTGGGGAGGTGGATGGGAATTT
GACGATGACGTATGGGAGCGCTTAGGAACAAGGATACTTAACTTCGTGTT
GCGCCGTAAGGAGCCCGAAGAACCACATCCTCTGCGCATGCAGCGCTGGA
CTATTTCCATGCGCCGCTTTCCGTTTTTTCGACTTGTTGTTCGACACATG
CAATTCTACGTCGACGGCCGCTGCGAAGTTGAAGAAGAGGTACACTCACC
ACCTCTCTTCCCAAAGCGGAGGAAGAAAGCGGGCCAGTCCGCTTTACCCT
CCGCAATACGTGCAGGCAAGGGGGAAAGTGCGCAGTCTCGAAAGTTACGG
AAGCGGAGGCCTCACGTAAAGAAGGCAAAAATCGCGGAGGAGCCCCCTAC
CCTCCAAGGCAAGTGGAAGTACGACAAATATGGCCTCAACTGGGAGCTGG
AGGAAGGTGGTCTGCGGTATTTCTACCACGCTGAGCTCATCTGGCACTCC
TTTGGGGATCGGCCCAAAATGCACTGTGGATGGGAACTTTTTCCGGGCTG
GGAAATGGCACAGATACATGCCTTATGCCCGAGTCCCAGGGAAGTAAGGA
CAATCGGTTCCGGGACTACTGAAGTGAGGGGCAGGGCCGTTAGAGAAGAC
CCCGGTGTACAGCAAGTAACTGTTTTCGACTACGCGTACCTTAGACAAGG
TAGAAGTCTCACGTTAACTTTTATCAATGTCTTCTTTAAAGAACAAAAAT
GTTGCCAGGCTCAGTCGATTTAA back to topprotein sequence of rna997 >rna997-protein ID=rna997-protein|Name=rna997|organism=Nannochloropsis gaditana|type=polypeptide|length=1220bp
MDTATLQNSRPLIVSQDVSAMQVDGCRLDHEAPGRRTSPPPWEHEKQNSR
GQEQTAPHVQRHEDLAIDLTLNDSEDGGDGSSCDFERTENGERHVGAPRS
QQQQAQQPRSTAPSAHGPNAGSGYDDVQLNFSQYGQPDCIQQTQFTPTQE
LAGHGRQGGRQQDEQAGALGSRGRDGAGASIIPMPLAMAATPNEHLRLRH
QAFLAEQEFYRQQEFYRRGRPWNRAPEVPSVPTLPGHMRVQPPLGLGSVQ
LGGYPLPYYPAYVQSRGMGVTGGVASSASADKYGVMGRIGTIERPSYVSV
APSIHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLT
AHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESE
SQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKT
IQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVK
AGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVV
ADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVL
NGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKA
TVMVRRRKKDILTGLPPKRRTFHKLTVPEQAIRGKLEGALEALSIVSATA
KKRARKRSRRQAEGGGEESEDLYATLARQRREQRARESGTGAVPPGGEEG
KGVAGAGANRQSVEASQGEGEMGEPGSGVAMEDWSAREIQQRKKVLLMEV
FRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIEDGCLRDVP
HIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLF
AELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMR
VLGELVEGAEGLDLEAREEGGTGGAKGGGKVKEEEGGREEVSVGGAKKTG
EKKGEMEEDDWEKKKEIRGAWEGLEGEEAEEKAEEEAEGKEESGKGSWRV
DKKTGNAAMAKLLISTEGKMREAKEERLESAEDSGPLSDKSESILRELAQ
EDRDRWKGGSDTEEEDDEDADDADWESSGLDDSSVGSSEEGVCELVTIDD
DGDEEQGKERPGPQGELGNDTRLQFSMTSCPAPEITSHHQEGYEKMRDVK
SSRDNGIGGESAEVIVLDDT back to topmRNA from alignment at CM002456.1:924744..929013+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna997 ID=rna997|Name=rna997|organism=Nannochloropsis gaditana|type=mRNA|length=4270bp|location=Sequence derived from alignment at CM002456.1:924744..929013+ (Nannochloropsis gaditana)
ACCACAGACACCCGCAgcgcttttcctccatgaCCAGCCATCATCGCAAA
CATTAATAcgctttttgggggggtgcATACGCACGACAGGACCGTCAGGT
CCTTCCTACCTTGAGAAGCAAATGGACACGGCGACTTTACAAAACTCGCG
GCCACTCATTGTCAGCCAGGATGTATCAGCCATGCAGGTGGATGGCTGTC
GACTCGACCACGAGGCCCCTGGGCGGCGtacatcccctcctccctgggaG
CATGAGAAGCAGAATTCTCGAGGGCAAGAGCAGACCGCACCACATGTGCA
GCGGCATGAAGATCTTGCGATTGATCTAACCTTGAATGACagcgaggatg
gaggcgatggatCTTCTTGTGATTTCGAAAGGACAGAAAATGGAGAGAGA
CACGTCGGAGCACCGCgatcgcagcagcagcaagcgcaGCAGCCGCGCTC
GACTGCTCCGAGCGCTCACGGGCCAAATGCTGGCTCGGGCTATGACGATG
TACAGCTCAACTTCTCCCAGTATGGTCAACCAGATTGCATCCAACAGACG
CAGTTCACACCCACACAGGAGCTAGCTGGGCACgggcgacagggaggaag
gcaacaaGACGAGCAGGCTGGCGCCCTCGgaagccgagggagggatggag
cgGGAGCATCTATAATCCCCATGCCCTTGGCAATGGCTGCGACCCCCAAC
GAGCATCTGCGCCTGAGACACCAAGCCTTCCTGGCGGAGCAAGAGTTCTA
CCGGCAGCAAGAGTTCTACCGACGGGGGCGACCCTGGAACCGTGCTCCCG
AGGTCCCCTCGGTTCCCACTCTCCCTGGACACATGCGAGTGCAGCCACCG
TTGGGCCTGGGGTCCGTGCAGTTGGGGGGGTACCCGCTGCCCTACTACCC
TGCGTACGTGCAGAGCCGTGGCATGGGCGTGACCGGCGGGGTGGCAAGCA
GTGCCAGCGCGGACAAGTACGGCGTCATGGGGAGGATCGGCACGATTGAG
AGGCCCTCGTACGTGTCCGTGGCGCCCAGCATTCATTTTGCAGTGTCTTC
GGGGGGGGAGTTCGCGGCGAGGCTGACCGGGCCCGTCCCCGGTAGCGTGC
TTTCCACCTTCCGCTTGACCCCTGGGGCCCGGCACAAGAAGAGCAAACGG
CGCTGGTACTTCCCCTTGACCGCGCACAACAACCTCTGCGTGGCTGTGGA
CCAGCTTCGCCGCCAACATTACCGGGAGACGGGCGTCGTCctggccctct
cccccatccccaaCGACGTCCTGCGCCAGCTGAGCATCCAGACGGACGGA
GAGCGGCTGGCCGAGAGCGAGTCCCAGAAACAGGCGCATGACAAGCTGGG
CAAGCTCCTACCCCGGCGCTtgctggaggccctggcgcccttccagaggg
aaggggtgtcATTTGTGGTGGAccgcgaggggcggggcctgATCGCCGAC
GAGATGGGTCTGGGCAAGACCATCCAAGCCATTGCCGTCGCCTGCGTCTA
CAAAGCCGAGTGGCCCCTGCTTGTCAtgtgcccctcctctgcccgctACC
ACTGGGAGGCGGAGCTCTTAAAGTGGCTTGACCGGGACGTGttaaaaaag
gaggagatccAGGTGGtgaaagcggggagggagcgccTGCATGAGACGAG
CAAGgtggtcatcctctcctacagcctggccctccgcctcaAGGAGGTGC
TCCGCGCGCCAGTCCGGAGCGCCGGGGTGGCGGTAGGGCACCGTCAGCAA
GCCCGCTTCCGTGTGGTCGTGGCGGACGAGTGCCATTACCTTAAAAACGC
CGGCGCGCAACGGACCAAGGAGCTCTTGCCCCTGCTGGCCGAGGCCACGc
gcgccatcctcctctcgggCACCCCGGCTCTCTCCCGTCCGCGTGAGCTG
TGGACGCAACTGAATGTGCTGAACGGGCGAGCCTGGAGCGAcatgtcctc
cttcattcGCCGGTACTGCaccgggggccggggccgcaAGACGTCGGGGC
CCGGGAAAAAGTGGCAGGggcgcggccaaggcgccgCGAACCTCCGGGAA
CTGCACGAGATGCTCAAGGCCACCGTTATGGTCCGTCGTCGGAAGAAGGA
TATCTTGACGGGCCTGCCGCCCAAGCGGCGCACCTTCCACAAGCTGACAG
TGCCGGAGCAGGCCATCCGGGGGAAGTTGGAGGGCGCCCTCGAGGCCCTG
AGCATTGTCTCGGCCACGGCGAAGAAGCGGGCGAGGAAACgatcgaggag
gcaggcggagggcgggggggaggaatcggAGGATTTGTACGCCACCCTGG
CCAGGCAGCGGCGGGAGCAGAGAGCCAGAGAAAGTGGCACGGGCGCGGTT
CCCcctggaggcgaggaggggaagggtgtcGCCGGAGCGGGAGCGAATAG
GCAAAGCGTTGAAGCCtcacaaggggaaggagaaatggggGAGCCAGGGT
CGGGGGTGGCAATGGAGGACTGGAGCGCGCGGGAGATCCAGCAACGGAAG
AAGGTGTTGCTGATGGAGGTCTTCCGGCTGACGGGGACGGCCAAGATCCC
TCTGGCCGTGGACCGTGTCAAAGCTCTGCTTGCCTCGGAGCTCTCGGGAA
AattcctcgtcttcgcccACCACATGAATGTGATGAACGGGATCGAAGAC
GGCTGCCTCCGCGACGTGCCGCACATCCGCATCGACGGCTCCACCCCCCC
GCCTGAGCGACAGGCGCGAGTGGACACCTTTCAGACAGACACGGGCGTGC
GCGTGGCCCTCCTGAGCCTCACGGCCGCGGGCCTGGCCTTGACCTTGACC
GCCGCAAGCCGGGTCTTGTTCGCGGAGCTGTTCTGGACGCCGGGTGCCTT
GCTGCAGGCGGAGGACAGATGCCATCGGATCGGGCAGACGTCGGAGGTGG
AGGTCGAGTACCTGCTGGCCAGAGGCACCTTGGACGACGCGCTCTGGCCG
TTGATCCGGCGTAAGATGCGCGTGCTGGGAGAGCtcgtggagggggcgga
gggcttggacctggaggcgagggaggaggggggaacggggggggccaaag
gaggggggaaggtaaaggaggaggaaggaggaagggaggaagtcagCGTG
GGAGGAGCCAAAAAGActggagaaaagaaaggtgaaatggaagaggacga
ttgggagaagaagaaggagattaggggggcatgggaggggctagaagggg
aggaggcggaggagaaggcggaggaggaagcggaagggaaagaagagagt
gGCAAGGGTAGTTGGAGAGTTGACAAGAAAACTGGAAATGCCGCAATGGC
CAAACTCCTGATATCGACGGAGGGCAAGATGcgagaagcaaaggaagaGC
GTTTGGAATCAGCCGAGGACTCAGGCCCTTTGTCGGATAAGTCCGAATCC
ATCCTTCGTGAGTTGGCACAAGAGGACCGCGATcgatggaagggaggcag
cgacacggaggaggaggacgacgaagatgCCGATGACGCTGATTGGGAGT
CATCCGGACTCGATGATTCATCAGTGGGCTCCAGTGAGGAGGGGGTGTGT
GAGCTTGTGACGATAGACGACgacggagacgaggagcaagggaaagaaag
accCGGACCGCAAGGCGAGCTCGGCAACGACACGCGTCTTCAGTTCTCCA
TGACTTCTTGTCCTGCGCCAGAAATTACCTCACATCACCAAGAGGGATAT
GAAAAGATGAGGGACGTGAAGAGCTCGAGAGATAATGGAataggggggga
aagcgcaGAGGTAATAGTGCTCGACGATACTTGAACGGCGAGCGACTTTT
GGCAAATGTAAATATGCAAAGCTTTTGTACCATAGATAAGAGAGTGTGTA
TACAGTGACAAATTAAACGATTCACACACGTATTTTCATCAGGCTTTTTT
TCGAGATACTTTCTGTCGGATCTCGTTGCGGTGCTGCTCCACCCCGCAAG
AGTGCCAGTAAACTTTCTTGGTCGAAATGAAGTATGCCTACGATTGTGCA
CTCTGAGGGACTCAATAAGAATCTTGGTGATTGGCATTCAAAGGCGACGA
TTAGAAAGTGCCAAAAAGTAAGCACTTTGCGGATGACATGTCTAGGACGA
TATGATTGGATAGTCATTCCAAGTAAAACATGCCTGCGCATAACACGAGA
GTGCACACGTCAGAGTACAAAAAGCAAAATAAAAGTTTAGCAGAGAGCCA
AACCTGAATATTCCTCAGTCTAAGGTGATTAGATAAAACTTGACAAGCGA
AGTAAAGCCTAATACACTGC back to topCoding sequence (CDS) from alignment at CM002456.1:924744..929013+ >rna997 ID=rna997|Name=rna997|organism=Nannochloropsis gaditana|type=CDS|length=3663bp|location=Sequence derived from alignment at CM002456.1:924744..929013+ (Nannochloropsis gaditana)
ATGGACACGGCGACTTTACAAAACTCGCGGCCACTCATTGTCAGCCAGGA
TGTATCAGCCATGCAGGTGGATGGCTGTCGACTCGACCACGAGGCCCCTG
GGCGGCGtacatcccctcctccctgggaGCATGAGAAGCAGAATTCTCGA
GGGCAAGAGCAGACCGCACCACATGTGCAGCGGCATGAAGATCTTGCGAT
TGATCTAACCTTGAATGACagcgaggatggaggcgatggatCTTCTTGTG
ATTTCGAAAGGACAGAAAATGGAGAGAGACACGTCGGAGCACCGCgatcg
cagcagcagcaagcgcaGCAGCCGCGCTCGACTGCTCCGAGCGCTCACGG
GCCAAATGCTGGCTCGGGCTATGACGATGTACAGCTCAACTTCTCCCAGT
ATGGTCAACCAGATTGCATCCAACAGACGCAGTTCACACCCACACAGGAG
CTAGCTGGGCACgggcgacagggaggaaggcaacaaGACGAGCAGGCTGG
CGCCCTCGgaagccgagggagggatggagcgGGAGCATCTATAATCCCCA
TGCCCTTGGCAATGGCTGCGACCCCCAACGAGCATCTGCGCCTGAGACAC
CAAGCCTTCCTGGCGGAGCAAGAGTTCTACCGGCAGCAAGAGTTCTACCG
ACGGGGGCGACCCTGGAACCGTGCTCCCGAGGTCCCCTCGGTTCCCACTC
TCCCTGGACACATGCGAGTGCAGCCACCGTTGGGCCTGGGGTCCGTGCAG
TTGGGGGGGTACCCGCTGCCCTACTACCCTGCGTACGTGCAGAGCCGTGG
CATGGGCGTGACCGGCGGGGTGGCAAGCAGTGCCAGCGCGGACAAGTACG
GCGTCATGGGGAGGATCGGCACGATTGAGAGGCCCTCGTACGTGTCCGTG
GCGCCCAGCATTCATTTTGCAGTGTCTTCGGGGGGGGAGTTCGCGGCGAG
GCTGACCGGGCCCGTCCCCGGTAGCGTGCTTTCCACCTTCCGCTTGACCC
CTGGGGCCCGGCACAAGAAGAGCAAACGGCGCTGGTACTTCCCCTTGACC
GCGCACAACAACCTCTGCGTGGCTGTGGACCAGCTTCGCCGCCAACATTA
CCGGGAGACGGGCGTCGTCctggccctctcccccatccccaaCGACGTCC
TGCGCCAGCTGAGCATCCAGACGGACGGAGAGCGGCTGGCCGAGAGCGAG
TCCCAGAAACAGGCGCATGACAAGCTGGGCAAGCTCCTACCCCGGCGCTt
gctggaggccctggcgcccttccagagggaaggggtgtcATTTGTGGTGG
AccgcgaggggcggggcctgATCGCCGACGAGATGGGTCTGGGCAAGACC
ATCCAAGCCATTGCCGTCGCCTGCGTCTACAAAGCCGAGTGGCCCCTGCT
TGTCAtgtgcccctcctctgcccgctACCACTGGGAGGCGGAGCTCTTAA
AGTGGCTTGACCGGGACGTGttaaaaaaggaggagatccAGGTGGtgaaa
gcggggagggagcgccTGCATGAGACGAGCAAGgtggtcatcctctccta
cagcctggccctccgcctcaAGGAGGTGCTCCGCGCGCCAGTCCGGAGCG
CCGGGGTGGCGGTAGGGCACCGTCAGCAAGCCCGCTTCCGTGTGGTCGTG
GCGGACGAGTGCCATTACCTTAAAAACGCCGGCGCGCAACGGACCAAGGA
GCTCTTGCCCCTGCTGGCCGAGGCCACGcgcgccatcctcctctcgggCA
CCCCGGCTCTCTCCCGTCCGCGTGAGCTGTGGACGCAACTGAATGTGCTG
AACGGGCGAGCCTGGAGCGAcatgtcctccttcattcGCCGGTACTGCac
cgggggccggggccgcaAGACGTCGGGGCCCGGGAAAAAGTGGCAGGggc
gcggccaaggcgccgCGAACCTCCGGGAACTGCACGAGATGCTCAAGGCC
ACCGTTATGGTCCGTCGTCGGAAGAAGGATATCTTGACGGGCCTGCCGCC
CAAGCGGCGCACCTTCCACAAGCTGACAGTGCCGGAGCAGGCCATCCGGG
GGAAGTTGGAGGGCGCCCTCGAGGCCCTGAGCATTGTCTCGGCCACGGCG
AAGAAGCGGGCGAGGAAACgatcgaggaggcaggcggagggcggggggga
ggaatcggAGGATTTGTACGCCACCCTGGCCAGGCAGCGGCGGGAGCAGA
GAGCCAGAGAAAGTGGCACGGGCGCGGTTCCCcctggaggcgaggagggg
aagggtgtcGCCGGAGCGGGAGCGAATAGGCAAAGCGTTGAAGCCtcaca
aggggaaggagaaatggggGAGCCAGGGTCGGGGGTGGCAATGGAGGACT
GGAGCGCGCGGGAGATCCAGCAACGGAAGAAGGTGTTGCTGATGGAGGTC
TTCCGGCTGACGGGGACGGCCAAGATCCCTCTGGCCGTGGACCGTGTCAA
AGCTCTGCTTGCCTCGGAGCTCTCGGGAAAattcctcgtcttcgcccACC
ACATGAATGTGATGAACGGGATCGAAGACGGCTGCCTCCGCGACGTGCCG
CACATCCGCATCGACGGCTCCACCCCCCCGCCTGAGCGACAGGCGCGAGT
GGACACCTTTCAGACAGACACGGGCGTGCGCGTGGCCCTCCTGAGCCTCA
CGGCCGCGGGCCTGGCCTTGACCTTGACCGCCGCAAGCCGGGTCTTGTTC
GCGGAGCTGTTCTGGACGCCGGGTGCCTTGCTGCAGGCGGAGGACAGATG
CCATCGGATCGGGCAGACGTCGGAGGTGGAGGTCGAGTACCTGCTGGCCA
GAGGCACCTTGGACGACGCGCTCTGGCCGTTGATCCGGCGTAAGATGCGC
GTGCTGGGAGAGCtcgtggagggggcggagggcttggacctggaggcgag
ggaggaggggggaacggggggggccaaaggaggggggaaggtaaaggagg
aggaaggaggaagggaggaagtcagCGTGGGAGGAGCCAAAAAGActgga
gaaaagaaaggtgaaatggaagaggacgattgggagaagaagaaggagat
taggggggcatgggaggggctagaaggggaggaggcggaggagaaggcgg
aggaggaagcggaagggaaagaagagagtgGCAAGGGTAGTTGGAGAGTT
GACAAGAAAACTGGAAATGCCGCAATGGCCAAACTCCTGATATCGACGGA
GGGCAAGATGcgagaagcaaaggaagaGCGTTTGGAATCAGCCGAGGACT
CAGGCCCTTTGTCGGATAAGTCCGAATCCATCCTTCGTGAGTTGGCACAA
GAGGACCGCGATcgatggaagggaggcagcgacacggaggaggaggacga
cgaagatgCCGATGACGCTGATTGGGAGTCATCCGGACTCGATGATTCAT
CAGTGGGCTCCAGTGAGGAGGGGGTGTGTGAGCTTGTGACGATAGACGAC
gacggagacgaggagcaagggaaagaaagaccCGGACCGCAAGGCGAGCT
CGGCAACGACACGCGTCTTCAGTTCTCCATGACTTCTTGTCCTGCGCCAG
AAATTACCTCACATCACCAAGAGGGATATGAAAAGATGAGGGACGTGAAG
AGCTCGAGAGATAATGGAatagggggggaaagcgcaGAGGTAATAGTGCT
CGACGATACTTGA back to top
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