Naga_100299g2, gene960 (gene) Nannochloropsis gaditana

Overview
NameNaga_100299g2
Unique Namegene960
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:924744..929013 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100299g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:924744..929013 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0016043cellular component organization
GO:0006950response to stress
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL049ngnoL049Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02210NO03G02210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna997rna997-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna997rna997Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna997

>rna997-protein ID=rna997-protein|Name=rna997|organism=Nannochloropsis gaditana|type=polypeptide|length=1220bp
MDTATLQNSRPLIVSQDVSAMQVDGCRLDHEAPGRRTSPPPWEHEKQNSR
GQEQTAPHVQRHEDLAIDLTLNDSEDGGDGSSCDFERTENGERHVGAPRS
QQQQAQQPRSTAPSAHGPNAGSGYDDVQLNFSQYGQPDCIQQTQFTPTQE
LAGHGRQGGRQQDEQAGALGSRGRDGAGASIIPMPLAMAATPNEHLRLRH
QAFLAEQEFYRQQEFYRRGRPWNRAPEVPSVPTLPGHMRVQPPLGLGSVQ
LGGYPLPYYPAYVQSRGMGVTGGVASSASADKYGVMGRIGTIERPSYVSV
APSIHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLT
AHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESE
SQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKT
IQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVK
AGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVV
ADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVL
NGRAWSDMSSFIRRYCTGGRGRKTSGPGKKWQGRGQGAANLRELHEMLKA
TVMVRRRKKDILTGLPPKRRTFHKLTVPEQAIRGKLEGALEALSIVSATA
KKRARKRSRRQAEGGGEESEDLYATLARQRREQRARESGTGAVPPGGEEG
KGVAGAGANRQSVEASQGEGEMGEPGSGVAMEDWSAREIQQRKKVLLMEV
FRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIEDGCLRDVP
HIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLF
AELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMR
VLGELVEGAEGLDLEAREEGGTGGAKGGGKVKEEEGGREEVSVGGAKKTG
EKKGEMEEDDWEKKKEIRGAWEGLEGEEAEEKAEEEAEGKEESGKGSWRV
DKKTGNAAMAKLLISTEGKMREAKEERLESAEDSGPLSDKSESILRELAQ
EDRDRWKGGSDTEEEDDEDADDADWESSGLDDSSVGSSEEGVCELVTIDD
DGDEEQGKERPGPQGELGNDTRLQFSMTSCPAPEITSHHQEGYEKMRDVK
SSRDNGIGGESAEVIVLDDT
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Synonyms
Publications