rna974, rna974 (mRNA) Nannochloropsis gaditana

Overview
Namerna974
Unique Namerna974
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1393
Alignment locationCM002456.1:869469..870915 -

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Properties
Property NameValue
ProductGlycosyltransferase
Orig transcript idgnl|cribi|Naga_100114g18.2471.mrna
Orig protein idgnl|cribi|Naga_100114g18.2471
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:869469..870915 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100114g18gene937Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29686.1cds973Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna974rna974-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna974 ID=rna974|Name=rna974|organism=Nannochloropsis gaditana|type=mRNA|length=1393bp
TCTCTCCGTCCATGTCCAGCCCCGCCCCGCCAGGCAGGTGTGATGCGGGC
GTTGCATGCGTGGTCAGGCAGCGAAGAGAGCCTGAGACACCTGCGCCAAC
CACTGCTGCCTCACCCGTGCGCGGTGGTGGCCGGGCAAGTGCGTGTAAGG
AGGGAGCCGGACATGGAGGCGAGGAGGATGAGAGTGCACCTCAAGGCTCT
CCTCTTCTGCTGTCCACATCGCGCAAATAAAAACCACCATCCTTTATATC
ATTGGAGCACATATCCTGTTGAATCACAGATCAACGTTTTAAAGAGTCGT
CAATCCGCGACGAGATGCTTTCGCAGGCTATTCGCGTCAACGCGGCGGCT
ACCGCAAGTGGATTCGTCCGCAGGCTTCCCCGGGGCTGGACTGGCATCGC
CGTGACAGGCTCGAGGAGGACGTATCATGAGAACATCGTAGACCACTACG
AAAACCCGCGCAATGTTGGTTCGCTAGACAAAACTGATCCGAACGTGGGC
ACGGGCCTTGTGGGTGCGCCAGCCTGCGGCGATGTCATGAAACTTCAGAT
CCGGGTAGACGAGGATGGGAAAATCACTGAGAGCAAATTTAAGACCTTTG
GATGTGGCTCGGCCATAGCGAGCAGCTCTGTGGCGACCGAGTGGCTGAAG
GGAAAAACAGTGGAGGAGTGCATGGCCATCAAGAATACGGACATTGCCGC
TCACCTCAAGCTCCCTCCTGTGAAGCTTCATTGCTCCATGCTTGCCGAGG
ATGCGATCAAGGCAGCTGTCAAGGATTTGGCTTCCAAGAAAGGGACGGAA
GCTAGGGCCGCTGTTGCGTAGAGGACAGCCAGGATGCGAGAGATACTTGC
TTGACCTTGATGAGCGATGAAATACGTGAAAAGAAGGTACTTGTTTACCA
TTTGGAGTAAGCTTGGATGTTGTCATCCCGATTACATGAGAGACAAATTC
TGACGCAAAGTTTGGAAGGCCACAAAGGAGAGAAGGTGATCGCCTTGGGG
GGGAGAGGCAGGAGGGCGAGGGAGGATTGTAAGTAAGCAAAGGAAGCAAA
ATGCGACGACTCACGCCGCTCGTGTGGGCTGTGGCCATGCTCAGCTCGGG
AAAGTGTTTCTTTCACGGTGTGGGCAAGTGTCTGGGCGCTGTCACCCTCG
GGTCTGCCAGGACCGGGCCCAGTGATGCACGGCGTACGCCACTTCCGGCA
CCGCGCCGGCAGCAGGCGGGCTGGGAGTGGCGACCGGTCGGTTGGGAATG
GGGTAAAACCAGACAGGCGGGGCCAGCAGGACGATGCCCACCTCGTCCAC
CTGACCCTGCTGCAGCACCAAGGCCGCCACCCCCCGTGTGAAGAGCCCCG
GACCCGTGGCCTCGATCGTGACGAACGCCTCCAGCTCCCGTGC
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protein sequence of rna974

>rna974-protein ID=rna974-protein|Name=rna974|organism=Nannochloropsis gaditana|type=polypeptide|length=211bp
MSTHSLRTSQQTGKMLPGLQTNYACDGDTGWTLPKKKHFYAKLLLISKIS
TEAWKGRHISNQILLYRESFTTYGLAPRCPSDFKLYAQHGFDITQRKTVG
IKGDVPSVLDLMSFFSFPQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQ
KSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVE
LNNGIIGCVAS
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mRNA from alignment at CM002456.1:869469..870915-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna974 ID=rna974|Name=rna974|organism=Nannochloropsis gaditana|type=mRNA|length=1447bp|location=Sequence derived from alignment at CM002456.1:869469..870915- (Nannochloropsis gaditana)
ACAACAGTTGTAAGATCATTTGTTACGCTGCCACTCTGCATGTTTCGGCC
ACATCATGCATTGAGCGGGCATAAAATCCAGAGGCCTTGCTGGCAGGGTG
GCCGCATATATGGGCCCTCCTTCAACAAGAATTAAGTGGGTTGCTTCTTC
CGCATGCACACGGCAACTTTTCCAACTAAATTATTTGAAAGTTCGACCAC
AGACGTATTTGAATACTTAATGGGTTCAAGGAACCAGTCGCAAATGCAAC
ACTTGCAGCAATATGTCAACTCATTCCTTGAGGACGAGCCAACAAACCGG
GAAGATGTTGCCGGGACTACAGACAAATTATGCCTGCGACGGGGATACTG
GCTGGACACTCCCAAAGAAGAAGCATTTTTACGCAAAGCTCTTGTTAATT
TCGAAAATTTCCACCGAGGCTTGGAAGGGAAGACATATTTCCAACCAAAT
TCTTCTATACCGCGAGTCTTTCACCACATATGGCTTGGCTCCCCGCTGCC
CGAGCGATTTCAAGCTTTACGCGCAACATGGCTTCGACATCACCCAGAGG
AAGACGGTAGGTATTAAAGGGGATGTCCCTTCTGTCTTGGACTTGATGTC
ATTTTTTTCCTTCCCGCAAGGTTGGACGCACCGGCTGTGGACAGACGCAG
ACGTGGACTCTATCTGCCTTCGTAACCAGCATGCATACTCGGCGGCTCCA
AACTACGGACAGAAATCCGACATACTAAGGTACGAGCTTCTGGAGAGACA
CGGAGGCGTCTATGTGGATGTGGATATGGAGTGCGTGCGACCGCTGGACG
ATCTTCACGGGCAACGAGGGCCGTCGTTCTATGCGGGCTTCTCGAACACG
GGCACTGTGGAGCTCAACAACGGGATTATCGGGTGCGTTGCCTCATAGAT
TCATGTGGCACCGACGGTACACTCATGACTGCTTTATTGGTCCCTCCTCC
CCTCGCGCCTTCGTAGCTCGATCCCAGGGCACCCCATCTTGAGACAGCTG
ATCGACCGCATCAAGCGAGAGCAGTCGAAGCCCCTGTCGGCGCGGCACCA
TCCCACGCGCGCGCAGGGCAGCAGCCTGGCCACAATCTTGAGCTTTTTGG
GACGAAGCGACGCTGTGGCAGCCGAGCATGCGGTGGCACGAGCGGCACGG
GAGCTGGAGGCGTTCGTCACGATCGAGGCCACGGGTCCGGGGCTCTTCAC
ACGGGGGGTGGCGGCCTTGGTGCTGCAGCAGGGTCAGGTGGACGAGGTGG
GCATCGTCCTGCTGGCCCCGCCTGTCTGGTTTTACCCCATTCCCAACCGA
CCGGTCGCCACTCCCAGCCCGCCTGCTGCCGGCGCGGTGCCGGAAGTGGC
GTACGCCGTGCATCACTGGGCCCGGTCCTGGCAGACCCGAGGGTGACAGC
GCCCAGACACTTGCCCACACCGTGAAAGAAACACTTTCCCGAGCTGA
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Coding sequence (CDS) from alignment at CM002456.1:869469..870915-

>rna974 ID=rna974|Name=rna974|organism=Nannochloropsis gaditana|type=CDS|length=636bp|location=Sequence derived from alignment at CM002456.1:869469..870915- (Nannochloropsis gaditana)
ATGTCAACTCATTCCTTGAGGACGAGCCAACAAACCGGGAAGATGTTGCC
GGGACTACAGACAAATTATGCCTGCGACGGGGATACTGGCTGGACACTCC
CAAAGAAGAAGCATTTTTACGCAAAGCTCTTGTTAATTTCGAAAATTTCC
ACCGAGGCTTGGAAGGGAAGACATATTTCCAACCAAATTCTTCTATACCG
CGAGTCTTTCACCACATATGGCTTGGCTCCCCGCTGCCCGAGCGATTTCA
AGCTTTACGCGCAACATGGCTTCGACATCACCCAGAGGAAGACGGTAGGT
ATTAAAGGGGATGTCCCTTCTGTCTTGGACTTGATGTCATTTTTTTCCTT
CCCGCAAGGTTGGACGCACCGGCTGTGGACAGACGCAGACGTGGACTCTA
TCTGCCTTCGTAACCAGCATGCATACTCGGCGGCTCCAAACTACGGACAG
AAATCCGACATACTAAGGTACGAGCTTCTGGAGAGACACGGAGGCGTCTA
TGTGGATGTGGATATGGAGTGCGTGCGACCGCTGGACGATCTTCACGGGC
AACGAGGGCCGTCGTTCTATGCGGGCTTCTCGAACACGGGCACTGTGGAG
CTCAACAACGGGATTATCGGGTGCGTTGCCTCATAG
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Synonyms
Publications