EWM29686.1, cds973 (CDS) Nannochloropsis gaditana

Overview
NameEWM29686.1
Unique Namecds973
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:870018..870653 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29686.1
ProductGlycosyltransferase
Orig transcript idgnl|cribi|Naga_100114g18.2471.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:870018..870653 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR007577GlycoTrfase_DXD_sugar-bd_CS
Homology
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|585112262|gb|EWM29686.1| (Glycosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 444.891 bits (1143), Expect = 2.968e-158
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query:    1 MSTHSLRTSQQTGKMLPGLQTNYACDGDTGWTLPKKKHFYAKLLLISKISTEAWKGRHISNQILLYRESFTTYGLAPRCPSDFKLYAQHGFDITQRKTVGIKGDVPSVLDLMSFFSFPQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVAS 211
            MSTHSLRTSQQTGKMLPGLQTNYACDGDTGWTLPKKKHFYAKLLLISKISTEAWKGRHISNQILLYRESFTTYGLAPRCPSDFKLYAQHGFDITQRKTVGIKGDVPSVLDLMSFFSFPQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVAS
Sbjct:    1 MSTHSLRTSQQTGKMLPGLQTNYACDGDTGWTLPKKKHFYAKLLLISKISTEAWKGRHISNQILLYRESFTTYGLAPRCPSDFKLYAQHGFDITQRKTVGIKGDVPSVLDLMSFFSFPQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVAS 211          
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|298705556|emb|CBJ34172.1| (surface protein Sur1 [Ectocarpus siliculosus])

HSP 1 Score: 117.857 bits (294), Expect = 1.312e-29
Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 0
Query:  121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIG 207
            W  RLWTDADVD+  L N+ AY AA N+GQKSDILRYE+L RHGG+YVDVD  C+   DDLH +    FYAG SNTGT ELNNG+IG
Sbjct:   87 WEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRY--EFYAGVSNTGTFELNNGLIG 171          
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|551668317|ref|XP_005836918.1| (hypothetical protein GUITHDRAFT_67557, partial [Guillardia theta CCMP2712] >gi|428181073|gb|EKX49938.1| hypothetical protein GUITHDRAFT_67557, partial [Guillardia theta CCMP2712])

HSP 1 Score: 95.5153 bits (236), Expect = 5.886e-22
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 0
Query:  121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGC 208
            W H LWT+ DV+ + + N  AY  APN G KSD+LR E++ R GG+Y+D+D EC++  D LH      FYAG SN G +E++NGI   
Sbjct:   25 WQHILWTEEDVEELAMLNPEAYKNAPNLGAKSDLLRLEVVWRFGGLYIDIDFECLKSFDVLHDHL--DFYAGLSNVGAMEISNGIFAA 110          
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|325181252|emb|CCA15666.1| (surface protein Sur1 putative [Albugo laibachii Nc14] >gi|325181815|emb|CCA16270.1| surface protein Sur1 putative [Albugo laibachii Nc14])

HSP 1 Score: 99.7525 bits (247), Expect = 1.439e-21
Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 0
Query:  118 PQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGC 208
            PQ W ++LWTD  V ++ L+N+  +  A NYG+KSDILRYE+L + GG+YVDVD +C+R   DL   +  SF  G SNT  VELNNG+I C
Sbjct:  109 PQ-WEYKLWTDTQVSTLKLQNKEHFDLAGNYGEKSDILRYEILLQFGGIYVDVDFKCLRLFQDL--LQAFSFITGISNTDVVELNNGLIAC 196          
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|1129185244|gb|OLP91655.1| (Uncharacterized protein C4orf22-like [Symbiodinium microadriaticum])

HSP 1 Score: 96.2857 bits (238), Expect = 2.020e-19
Identity = 49/94 (52.13%), Postives = 59/94 (62.77%), Query Frame = 0
Query:  121 WTHRLWTDADVDSICLRNQ----HAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVA 210
            W +RLWTD D     LR       AY AA N  +KSDILR  ++ RHGG+YVDVD EC++PLD LH +   SFY G SN G VE+NNG+    A
Sbjct:   91 WEYRLWTDDDAGEE-LRGHPGLAKAYEAADNPAEKSDILRLAIILRHGGLYVDVDFECLKPLDVLHSR--ASFYCGLSNVGAVEVNNGLFAATA 181          
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|635372069|emb|CCI39677.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 92.8189 bits (229), Expect = 2.893e-19
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 0
Query:  121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVR---------------PLDDLHGQRGPSFYAGFSNTGTVELNNGIIGC 208
            W ++LWTD ++ ++ LRN++ ++ A N+G+KSDILRYE+L + GG+YVDVD +C++               P  DL      SF  G SNT   ELNNG++ C
Sbjct:   35 WDYKLWTDNELSTLKLRNENRFNLAANFGEKSDILRYEILLQFGGLYVDVDFKCLKSFEGLCKVRSIHSHYPFVDLTRVETFSFVTGISNTSVFELNNGLLAC 137          
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|1083710327|gb|OGH95988.1| (hypothetical protein A2X43_03580 [Candidatus Margulisbacteria bacterium GWD2_39_127] >gi|1083717407|gb|OGI02506.1| hypothetical protein A2X42_07465 [Candidatus Margulisbacteria bacterium GWF2_38_17] >gi|1083727987|gb|OGI10999.1| hypothetical protein A2X41_01990 [Candidatus Margulisbacteria bacterium GWE2_39_32])

HSP 1 Score: 90.5077 bits (223), Expect = 2.268e-18
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 0
Query:  117 FPQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVA 210
            F   W + LWTD +V  + + N+  +S   NYG KSDILRYE+L + GG+YVD D EC  P D +H Q    F+AG   +    LNN +IG VA
Sbjct:   78 FHPDWEYYLWTDKEVKKLEMINRELFSRTSNYGAKSDILRYEILNQFGGLYVDTDFECFHPFDTIHEQ--CHFFAGLVYSEAPLLNNALIGSVA 169          
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|917589774|ref|WP_052179057.1| (hypothetical protein [Solirubrobacterales bacterium URHD0059])

HSP 1 Score: 85.5001 bits (210), Expect = 7.397e-16
Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 0
Query:  121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVA 210
            W HRLWTDADV  +      A + A N  ++SD LRYE+L RHGG+Y+D D+ECVRP+D L   RG S +AG+   G   L + ++G VA
Sbjct:  430 WEHRLWTDADVPDVP-----ALARARNLAEQSDFLRYEILRRHGGIYLDTDVECVRPIDGL--LRGVSMFAGYEVPG--RLGSAVMGGVA 510          
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|406988495|gb|EKE08478.1| (hypothetical protein ACD_17C00148G0003, partial [uncultured bacterium])

HSP 1 Score: 82.8037 bits (203), Expect = 1.215e-15
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0
Query:  121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGF----SNTGTVELNNGIIGCV 209
            W + LWTDADV++    N+  +  A N G+KSDILRYE+L + GG+YVD D EC++P D LH      FY G     +      + N +IG +
Sbjct:  106 WEYHLWTDADVETFPFSNKERFEKAMNVGEKSDILRYEILSQFGGLYVDTDFECIQPFDSLHFL--CDFYVGLETPHAKDTEAAIGNALIGSI 196          
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|551654763|ref|XP_005830157.1| (hypothetical protein GUITHDRAFT_110904 [Guillardia theta CCMP2712] >gi|428174280|gb|EKX43177.1| hypothetical protein GUITHDRAFT_110904 [Guillardia theta CCMP2712])

HSP 1 Score: 83.5741 bits (205), Expect = 1.768e-15
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 0
Query:  119 QGWTHRLWTDADV----DSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIG 207
            +GW H LW D  +     S  + +  +Y++A NYG+KSDILR E+L R GGVYVDVD +C+R   D+          G SN G +E+NNG+IG
Sbjct:  121 EGWKHYLWDDESIAQEFSSNPMDSAGSYASASNYGEKSDILRLEVLNRFGGVYVDVDFKCIRSFHDI---------LGLSNVGHIEVNNGLIG 204          
The following BLAST results are available for this feature:
BLAST of EWM29686.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112262|gb|EWM29686.1|2.968e-158100.00Glycosyltransferase [Nannochloropsis gaditana][more]
gi|298705556|emb|CBJ34172.1|1.312e-2966.67surface protein Sur1 [Ectocarpus siliculosus][more]
gi|551668317|ref|XP_005836918.1|5.886e-2247.73hypothetical protein GUITHDRAFT_67557, partial [Gu... [more]
gi|325181252|emb|CCA15666.1|1.439e-2152.75surface protein Sur1 putative [Albugo laibachii Nc... [more]
gi|1129185244|gb|OLP91655.1|2.020e-1952.13Uncharacterized protein C4orf22-like [Symbiodinium... [more]
gi|635372069|emb|CCI39677.1|2.893e-1941.75unnamed protein product [Albugo candida][more]
gi|1083710327|gb|OGH95988.1|2.268e-1845.74hypothetical protein A2X43_03580 [Candidatus Margu... [more]
gi|917589774|ref|WP_052179057.1|7.397e-1648.89hypothetical protein [Solirubrobacterales bacteriu... [more]
gi|406988495|gb|EKE08478.1|1.215e-1541.94hypothetical protein ACD_17C00148G0003, partial [u... [more]
gi|551654763|ref|XP_005830157.1|1.768e-1545.16hypothetical protein GUITHDRAFT_110904 [Guillardia... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna974rna974Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications