EWM29686.1, cds973 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|585112262|gb|EWM29686.1| (Glycosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 444.891 bits (1143), Expect = 2.968e-158 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query: 1 MSTHSLRTSQQTGKMLPGLQTNYACDGDTGWTLPKKKHFYAKLLLISKISTEAWKGRHISNQILLYRESFTTYGLAPRCPSDFKLYAQHGFDITQRKTVGIKGDVPSVLDLMSFFSFPQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVAS 211
MSTHSLRTSQQTGKMLPGLQTNYACDGDTGWTLPKKKHFYAKLLLISKISTEAWKGRHISNQILLYRESFTTYGLAPRCPSDFKLYAQHGFDITQRKTVGIKGDVPSVLDLMSFFSFPQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVAS
Sbjct: 1 MSTHSLRTSQQTGKMLPGLQTNYACDGDTGWTLPKKKHFYAKLLLISKISTEAWKGRHISNQILLYRESFTTYGLAPRCPSDFKLYAQHGFDITQRKTVGIKGDVPSVLDLMSFFSFPQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVAS 211
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|298705556|emb|CBJ34172.1| (surface protein Sur1 [Ectocarpus siliculosus]) HSP 1 Score: 117.857 bits (294), Expect = 1.312e-29 Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 0
Query: 121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIG 207
W RLWTDADVD+ L N+ AY AA N+GQKSDILRYE+L RHGG+YVDVD C+ DDLH + FYAG SNTGT ELNNG+IG
Sbjct: 87 WEVRLWTDADVDAFGLENRGAYDAAQNFGQKSDILRYEVLLRHGGLYVDVDFLCLGSFDDLHKRY--EFYAGVSNTGTFELNNGLIG 171
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|551668317|ref|XP_005836918.1| (hypothetical protein GUITHDRAFT_67557, partial [Guillardia theta CCMP2712] >gi|428181073|gb|EKX49938.1| hypothetical protein GUITHDRAFT_67557, partial [Guillardia theta CCMP2712]) HSP 1 Score: 95.5153 bits (236), Expect = 5.886e-22 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 0
Query: 121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGC 208
W H LWT+ DV+ + + N AY APN G KSD+LR E++ R GG+Y+D+D EC++ D LH FYAG SN G +E++NGI
Sbjct: 25 WQHILWTEEDVEELAMLNPEAYKNAPNLGAKSDLLRLEVVWRFGGLYIDIDFECLKSFDVLHDHL--DFYAGLSNVGAMEISNGIFAA 110
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|325181252|emb|CCA15666.1| (surface protein Sur1 putative [Albugo laibachii Nc14] >gi|325181815|emb|CCA16270.1| surface protein Sur1 putative [Albugo laibachii Nc14]) HSP 1 Score: 99.7525 bits (247), Expect = 1.439e-21 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 0
Query: 118 PQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGC 208
PQ W ++LWTD V ++ L+N+ + A NYG+KSDILRYE+L + GG+YVDVD +C+R DL + SF G SNT VELNNG+I C
Sbjct: 109 PQ-WEYKLWTDTQVSTLKLQNKEHFDLAGNYGEKSDILRYEILLQFGGIYVDVDFKCLRLFQDL--LQAFSFITGISNTDVVELNNGLIAC 196
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|1129185244|gb|OLP91655.1| (Uncharacterized protein C4orf22-like [Symbiodinium microadriaticum]) HSP 1 Score: 96.2857 bits (238), Expect = 2.020e-19 Identity = 49/94 (52.13%), Postives = 59/94 (62.77%), Query Frame = 0
Query: 121 WTHRLWTDADVDSICLRNQ----HAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVA 210
W +RLWTD D LR AY AA N +KSDILR ++ RHGG+YVDVD EC++PLD LH + SFY G SN G VE+NNG+ A
Sbjct: 91 WEYRLWTDDDAGEE-LRGHPGLAKAYEAADNPAEKSDILRLAIILRHGGLYVDVDFECLKPLDVLHSR--ASFYCGLSNVGAVEVNNGLFAATA 181
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|635372069|emb|CCI39677.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 92.8189 bits (229), Expect = 2.893e-19 Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 0
Query: 121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVR---------------PLDDLHGQRGPSFYAGFSNTGTVELNNGIIGC 208
W ++LWTD ++ ++ LRN++ ++ A N+G+KSDILRYE+L + GG+YVDVD +C++ P DL SF G SNT ELNNG++ C
Sbjct: 35 WDYKLWTDNELSTLKLRNENRFNLAANFGEKSDILRYEILLQFGGLYVDVDFKCLKSFEGLCKVRSIHSHYPFVDLTRVETFSFVTGISNTSVFELNNGLLAC 137
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|1083710327|gb|OGH95988.1| (hypothetical protein A2X43_03580 [Candidatus Margulisbacteria bacterium GWD2_39_127] >gi|1083717407|gb|OGI02506.1| hypothetical protein A2X42_07465 [Candidatus Margulisbacteria bacterium GWF2_38_17] >gi|1083727987|gb|OGI10999.1| hypothetical protein A2X41_01990 [Candidatus Margulisbacteria bacterium GWE2_39_32]) HSP 1 Score: 90.5077 bits (223), Expect = 2.268e-18 Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 0
Query: 117 FPQGWTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVA 210
F W + LWTD +V + + N+ +S NYG KSDILRYE+L + GG+YVD D EC P D +H Q F+AG + LNN +IG VA
Sbjct: 78 FHPDWEYYLWTDKEVKKLEMINRELFSRTSNYGAKSDILRYEILNQFGGLYVDTDFECFHPFDTIHEQ--CHFFAGLVYSEAPLLNNALIGSVA 169
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|917589774|ref|WP_052179057.1| (hypothetical protein [Solirubrobacterales bacterium URHD0059]) HSP 1 Score: 85.5001 bits (210), Expect = 7.397e-16 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 0
Query: 121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIGCVA 210
W HRLWTDADV + A + A N ++SD LRYE+L RHGG+Y+D D+ECVRP+D L RG S +AG+ G L + ++G VA
Sbjct: 430 WEHRLWTDADVPDVP-----ALARARNLAEQSDFLRYEILRRHGGIYLDTDVECVRPIDGL--LRGVSMFAGYEVPG--RLGSAVMGGVA 510
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|406988495|gb|EKE08478.1| (hypothetical protein ACD_17C00148G0003, partial [uncultured bacterium]) HSP 1 Score: 82.8037 bits (203), Expect = 1.215e-15 Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0
Query: 121 WTHRLWTDADVDSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGF----SNTGTVELNNGIIGCV 209
W + LWTDADV++ N+ + A N G+KSDILRYE+L + GG+YVD D EC++P D LH FY G + + N +IG +
Sbjct: 106 WEYHLWTDADVETFPFSNKERFEKAMNVGEKSDILRYEILSQFGGLYVDTDFECIQPFDSLHFL--CDFYVGLETPHAKDTEAAIGNALIGSI 196
BLAST of EWM29686.1 vs. NCBI_GenBank
Match: gi|551654763|ref|XP_005830157.1| (hypothetical protein GUITHDRAFT_110904 [Guillardia theta CCMP2712] >gi|428174280|gb|EKX43177.1| hypothetical protein GUITHDRAFT_110904 [Guillardia theta CCMP2712]) HSP 1 Score: 83.5741 bits (205), Expect = 1.768e-15 Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 0
Query: 119 QGWTHRLWTDADV----DSICLRNQHAYSAAPNYGQKSDILRYELLERHGGVYVDVDMECVRPLDDLHGQRGPSFYAGFSNTGTVELNNGIIG 207
+GW H LW D + S + + +Y++A NYG+KSDILR E+L R GGVYVDVD +C+R D+ G SN G +E+NNG+IG
Sbjct: 121 EGWKHYLWDDESIAQEFSSNPMDSAGSYASASNYGEKSDILRLEVLNRFGGVYVDVDFKCIRSFHDI---------LGLSNVGHIEVNNGLIG 204 The following BLAST results are available for this feature:
BLAST of EWM29686.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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