EWM29765.1, cds930 (CDS) Nannochloropsis gaditana

Overview
NameEWM29765.1
Unique Namecds930
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:753741..753896 +
Alignment locationCM002456.1:754092..754922 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29765.1
Productribosome production factor
Orig transcript idgnl|cribi|Naga_100022g44.864.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:753741..753896 +
CM002456.1supercontigCM002456.1:754092..754922 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: INTERPRO
TermDefinition
IPR004154Anticodon-bd
IPR007109Brix
Homology
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|585112345|gb|EWM29765.1| (ribosome production factor [Nannochloropsis gaditana])

HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0
Query:    1 MVKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            MVKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL
Sbjct:    1 MVKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328          
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|299471886|emb|CBN77056.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 416.387 bits (1069), Expect = 1.451e-143
Identity = 209/327 (63.91%), Postives = 250/327 (76.45%), Query Frame = 0
Query:    2 VKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            +K  +  I N+ KR E++ K K  KK  +K  R +R+REA ELG+EAPPKQ P+TLE+TR+ D T+V+P D EV  DEAEDEF  +FS ++TPKI+ITTRPRPS  LFHFV DLM++IPNAFFYPRKSF VK IC+ A+   FTH+F++SE+ K CNGL+VS LP GPT FFKVSNV P  ++ +HG+ TAH PE+ILNNFNTRLGHRVGRFLGSFFPH PEF GRQVVTFHNQRD++FVR HRY+F E K +              GD  K       RARLQELGPRFTLK+RWLQEGTFDT++GEYEW+HKRKEMD+TRR FHL
Sbjct:    1 MKTSLGHIGNKAKRTELYRKQKGNKKAEQKDRRRRREREAQELGEEAPPKQKPKTLESTRDPDRTVVKPADDEVFRDEAEDEFARFFSNEQTPKIMITTRPRPSGNLFHFVQDLMRMIPNAFFYPRKSFTVKQICQWADNKKFTHLFVISERLKICNGLIVSVLPHGPTAFFKVSNVIPSTEVFNHGKVTAHQPEIILNNFNTRLGHRVGRFLGSFFPHEPEFNGRQVVTFHNQRDYIFVRFHRYIFAEGKGE--------------GDTKKT------RARLQELGPRFTLKMRWLQEGTFDTQYGEYEWIHKRKEMDSTRRTFHL 307          
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|397603955|gb|EJK58570.1| (hypothetical protein THAOC_21295 [Thalassiosira oceanica])

HSP 1 Score: 383.259 bits (983), Expect = 6.629e-130
Identity = 189/328 (57.62%), Postives = 229/328 (69.82%), Query Frame = 0
Query:    9 IRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHL-PC-------GPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            I N+ KR E++ K    KK  K++ R  R+++A  LG++AP K  PRTL+NTRE + T V+ DD E++ADEAEDEF PYFS +  PKIL+TTRP PS ELFHF+ DLM+ IP  ++YPRKS+ VK IC       FTHV +LSEK K CNG+L+SHL P        GPT FFK+SN  P   + ++G  T HVPEL L+ F TRLGHR GRFLGS FPH  +F+GRQV TFHNQRDF+FVRHHRY+F+E K                 D SK       +ARLQELGPRFT+K+RWLQEGTFDT+FGEYEW HKRKEMDTTRR+FHL
Sbjct:   36 ITNKLKRSEMYGKYLLAKKAQKRASRIAREKQAEALGEDAPAKPKPRTLDNTRESEVTTVKEDDEEIIADEAEDEFAPYFSDEIRPKILLTTRPCPSAELFHFIADLMRFIPQMYYYPRKSYSVKEICTFGSNRRFTHVIVLSEKSKVCNGMLISHLRPSTAANGLGGPTAFFKLSNYIPSTDVPNNGSATNHVPELNLHGFTTRLGHRAGRFLGSLFPHNAQFQGRQVATFHNQRDFIFVRHHRYIFEEGK-----------------DTSKETKEKKTKARLQELGPRFTIKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 346          
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|673029578|ref|XP_008868750.1| (hypothetical protein H310_05718 [Aphanomyces invadans] >gi|574475145|gb|ETW02145.1| hypothetical protein H310_05718 [Aphanomyces invadans])

HSP 1 Score: 377.096 bits (967), Expect = 1.494e-127
Identity = 180/327 (55.05%), Postives = 234/327 (71.56%), Query Frame = 0
Query:    2 VKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            ++K  S I+N+ KR++V  + K EK+ +K+ +R  R+REA ELGD+AP K  PRT++N RE + T++  DD E+V D+ +DEF   F+ +ETPKI+ TTRP PS +++ FV +LM+ +PN+F+Y R ++++K ICK A    FTHV ILSEK K  NGL++S LP GPT FFKVSNV    KI +H + T+H PE+ILNNFNTRLGHR+GRFLGSFF H P+F GRQVVTFHNQRD++FVR HRYVF+                             G +ARLQE+GP+FTLKLRWLQEGTFDTKFGEYEW+HK+  MDT+RR+FHL
Sbjct:   41 LRKNPSAIKNKMKRQQVMVEYKKEKRAIKEEKRAARKREAEELGDKAPAKLEPRTIDNAREAEVTMISADDEEIVGDDHDDEFASIFAAEETPKIMWTTRPFPSADMYPFVQNLMEFVPNSFYYKRGTYDIKDICKFAGNKEFTHVGILSEKEKVVNGLVISRLPHGPTAFFKVSNVVLMDKIVNHARKTSHQPEVILNNFNTRLGHRIGRFLGSFFEHKPDFIGRQVVTFHNQRDYIFVRQHRYVFE----------------------------NGKKARLQEIGPKFTLKLRWLQEGTFDTKFGEYEWIHKQHAMDTSRRKFHL 339          
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|223994087|ref|XP_002286727.1| (hypothetical protein THAPSDRAFT_31465 [Thalassiosira pseudonana CCMP1335] >gi|220978042|gb|EED96368.1| hypothetical protein THAPSDRAFT_31465 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 371.318 bits (952), Expect = 6.179e-126
Identity = 186/320 (58.13%), Postives = 223/320 (69.69%), Query Frame = 0
Query:   18 VHAKVKAEKKKVKKSERTKRQREALELGDEAP-PKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHL-PC-------GPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            ++ K   EKK  K+  R +R++EA  LG++A   KQ PRTL+NTRE + T VQPDD E++ADEAEDEF PYFS +  PKIL+TTRP PS ELFHF+ DLM+  P  ++YPRKS+ VK IC       FTH+ +LSEK K CNG+L+SHL P        GPT FFKVSNV P + + ++G  T HVPEL+LN F TRLGHR GRFLGS FPH  +F+GRQV TFHNQRDF+FVRHHRY                + I     G K       +ARLQELGPRFT+K+RWLQEGTFDT+FGEYEW HKRKEMDTTRR+FHL
Sbjct:    1 MYGKYLLEKKAKKRQTRIQREKEAEALGEDAEVKKQTPRTLDNTRESEVTTVQPDDEEIIADEAEDEFAPYFSDEIRPKILLTTRPCPSGELFHFISDLMRFFPQLYYYPRKSYSVKEICTFGSNRKFTHLIVLSEKSKVCNGMLISHLRPSTAANGLGGPTAFFKVSNVIPSSDVPNNGSATNHVPELVLNGFTTRLGHRAGRFLGSLFPHNAQFQGRQVATFHNQRDFIFVRHHRY----------------EMICCLETGKKK-----TKARLQELGPRFTMKMRWLQEGTFDTQFGEYEWFHKRKEMDTTRRKFHL 299          
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|219119622|ref|XP_002180567.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408040|gb|EEC47975.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 369.007 bits (946), Expect = 4.388e-125
Identity = 183/318 (57.55%), Postives = 223/318 (70.13%), Query Frame = 0
Query:   18 VHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHL-------PCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            ++ K   +K+  K+  R +R +EA  LGD+APPKQ P+T++NTRE++ T+V  D  EV ADEAEDEF PYF+G E PK+LITTRPRPS+ LFHF+ DL ++IP   FYPRKS+ VK IC  A    FTH+ +LSEK K CNGL +SHL         GPT FFKVSNV    KI +HG  T+H+PEL L+ F TRLGHR+GR LGS FPH  +F+GRQVVTFHNQRD++FVRHHRY+F E + K+                            LQELGPRFTLKLRW+QEGTFDT+FGEYEW+HKRKEMDTTRR+FHL
Sbjct:    1 MYGKYLQQKRAAKQESRIQRHKEAEALGDDAPPKQAPKTIDNTRELEPTMVLQDP-EVAADEAEDEFAPYFNG-EKPKVLITTRPRPSQNLFHFIADLQKLIPALHFYPRKSYSVKEICSFAANREFTHLIVLSEKSKVCNGLTLSHLRMHDGVAKAGPTAFFKVSNVVTSKKIPNHGASTSHIPELNLHGFGTRLGHRIGRLLGSVFPHDAQFQGRQVVTFHNQRDYIFVRHHRYIFRELEGKA--------------------------KDLQELGPRFTLKLRWIQEGTFDTQFGEYEWIHKRKEMDTTRRKFHL 290          
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|813178924|ref|XP_012205931.1| (hypothetical protein SPRG_11539 [Saprolegnia parasitica CBS 223.65] >gi|641529260|gb|KDO23445.1| hypothetical protein SPRG_11539 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 368.237 bits (944), Expect = 4.275e-124
Identity = 181/328 (55.18%), Postives = 236/328 (71.95%), Query Frame = 0
Query:    1 MVKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            +++K  S I+N+ KR++V    K EKK +KK  +  R++EA ELGD+AP KQVPRT++N RE + T++  DD E+ AD+ +DEF   F  +ETPK++ITTRP PS +++ FV +LM+ IPN+F+Y RK++++K IC+ A    FTHV ILSEK K  NG++VS LP GPT FFK+SNV    KI +  + T+H PELILNNFNTRLGHR+GRFLGSFF H P+F+GRQVVTFHNQRDF+FVR HRY+F+                             G +ARLQE+GPRFT+KLRWLQEGTFDTK+GEYEW+HK+  MDT+RR+FHL
Sbjct:   39 ILRKNPSGIKNKIKRQQVMQLYKKEKKTMKKEAQAARKKEAEELGDKAPAKQVPRTIDNAREAEVTMIGGDDDEIAADDQDDEFARIFGNEETPKLMITTRPFPSGDMYPFVQNLMEFIPNSFYYDRKTYDIKDICRFAGNKAFTHVCILSEKEKKVNGMVVSRLPHGPTAFFKISNVVLNNKIQNKAKRTSHQPELILNNFNTRLGHRIGRFLGSFFEHKPDFKGRQVVTFHNQRDFIFVRQHRYIFEN----------------------------GKKARLQEIGPRFTMKLRWLQEGTFDTKYGEYEWIHKQHAMDTSRRKFHL 338          
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|1173943826|gb|OQR92633.1| (ribosome production factor 1 [Achlya hypogyna])

HSP 1 Score: 367.466 bits (942), Expect = 6.956e-124
Identity = 178/328 (54.27%), Postives = 236/328 (71.95%), Query Frame = 0
Query:    1 MVKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            +++K  S I+N+ KR+++    K EKK +KK  +  R++EA ELG+ AP KQVPRT++N RE + T++  +D E+  D+ +DEF   F+ ++TPK+++TTRP PS E++ FV +LM+ IPN+F+Y RK++++K ICK A    FTHV ILSEK K CNG++VS LP GPT FFK+SNV    KI +  + T+H PELILNNFNTRLGHR+GRFLGSFF H P+F+GRQVVTFHNQRDF+FVR HRY+F+                             G +ARLQE+GPRFT+KLRWLQEGTFDTK+GEYEW+HK+  MDT+RR+FHL
Sbjct:   28 ILRKNPSGIKNKIKRQQIMQLYKKEKKTMKKEAQAARKKEAEELGENAPAKQVPRTIDNAREAEVTMIGGEDDEIANDDMDDEFAKIFNNEQTPKLMLTTRPFPSGEMYPFVQNLMEFIPNSFYYDRKTYDIKDICKFASNKDFTHVCILSEKEKKCNGMVVSRLPHGPTAFFKISNVVLNNKIQNKAKRTSHQPELILNNFNTRLGHRIGRFLGSFFEHKPDFKGRQVVTFHNQRDFIFVRQHRYIFE----------------------------NGKKARLQEIGPRFTMKLRWLQEGTFDTKYGEYEWIHKQHSMDTSRRKFHL 327          
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|695429513|ref|XP_009530212.1| (hypothetical protein PHYSODRAFT_354905 [Phytophthora sojae] >gi|348672964|gb|EGZ12783.1| hypothetical protein PHYSODRAFT_354905 [Phytophthora sojae])

HSP 1 Score: 363.614 bits (932), Expect = 1.626e-122
Identity = 183/323 (56.66%), Postives = 233/323 (72.14%), Query Frame = 0
Query:    7 SRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPD-DLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            S I+N+ KR+ V  K + EKK+ KK+ + KR+REA E+G+EAPPK  PRT++NTRE + T+V  + D E+ ADE +DEF   F+ +ETPK++ITTRP PS EL+HF+ DLM ++PN+F+Y R +F++K I + A    FTH+ +LSEK K CNG+LVS LP GPT FFKVSNV   + I   G+ T H PELILNNF+TRLGHRVGRFLGS F H PEF G QVVTFHNQRDF+FVRHHRY F+ +K                            +ARLQE+GPRFT+KLRWLQ+GTFDTKFGEYEW+HK+ ++DT+RR+FHL
Sbjct:   30 SHIKNKMKRQLVMQKYRKEKKEAKKAAQLKRRREAEEMGEEAPPKMEPRTIDNTREKEVTMVSSEGDEEIEADERDDEFASIFANEETPKLMITTRPFPSGELYHFIKDLMDLLPNSFYYKRGTFDIKEIVQFATNKKFTHLVVLSEKSKICNGMLVSRLPEGPTAFFKVSNVKLTSSIKERGRRTNHQPELILNNFSTRLGHRVGRFLGSLFEHQPEFEGHQVVTFHNQRDFIFVRHHRYTFENEK----------------------------KARLQEIGPRFTMKLRWLQQGTFDTKFGEYEWIHKQHQLDTSRRKFHL 324          
BLAST of EWM29765.1 vs. NCBI_GenBank
Match: gi|669151128|ref|XP_008611126.1| (hypothetical protein SDRG_07088 [Saprolegnia diclina VS20] >gi|530737134|gb|EQC35376.1| hypothetical protein SDRG_07088 [Saprolegnia diclina VS20])

HSP 1 Score: 363.614 bits (932), Expect = 3.260e-122
Identity = 179/328 (54.57%), Postives = 235/328 (71.65%), Query Frame = 0
Query:    1 MVKKEVSRIRNRCKRREVHAKVKAEKKKVKKSERTKRQREALELGDEAPPKQVPRTLENTREVDETIVQPDDLEVVADEAEDEFQPYFSGKETPKILITTRPRPSRELFHFVGDLMQVIPNAFFYPRKSFEVKAICKHAEEGGFTHVFILSEKYKACNGLLVSHLPCGPTVFFKVSNVTPGAKIAHHGQPTAHVPELILNNFNTRLGHRVGRFLGSFFPHAPEFRGRQVVTFHNQRDFLFVRHHRYVFDEKKAKSVPEINNPKKIKSAGDGSKAIAAGGIRARLQELGPRFTLKLRWLQEGTFDTKFGEYEWLHKRKEMDTTRRRFHL 328
            +++K  S I+N+ KR++V    K EKK +KK  +  R++EA ELGD+AP KQ PRT++N RE + T++  DD E+ AD+ +DEF   F  +ETPK++ITTRP PS +++ FV +LM+ IPN+F+Y RK++++K IC+ A    FTHV ILSEK K  NG++VS LP GPT FFK+SNV    +I +  + T+H PELILNNFNTRLGHR+GRFLGSFF H P+F+GRQVVTFHNQRDF+FVR HRY+F+                             G +ARLQE+GPRFT+KLRWLQEGTFDTK+GEYEW+HK+  MDT+RR+FHL
Sbjct:   39 ILRKNPSGIKNKIKRQQVMQLYKKEKKTMKKEAQAARKKEAEELGDKAPAKQEPRTIDNAREAEVTMIGGDDDEIAADDHDDEFARIFGNEETPKLMITTRPFPSGDMYPFVQNLMEFIPNSFYYDRKTYDIKDICRFAGNKAFTHVCILSEKEKKVNGMVVSRLPHGPTAFFKISNVVLNKQIQNKAKRTSHQPELILNNFNTRLGHRIGRFLGSFFEHKPDFKGRQVVTFHNQRDFIFVRQHRYIFEN----------------------------GKKARLQEIGPRFTMKLRWLQEGTFDTKYGEYEWIHKQHAMDTSRRKFHL 338          
The following BLAST results are available for this feature:
BLAST of EWM29765.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112345|gb|EWM29765.1|0.000e+0100.00ribosome production factor [Nannochloropsis gadita... [more]
gi|299471886|emb|CBN77056.1|1.451e-14363.91conserved unknown protein [Ectocarpus siliculosus][more]
gi|397603955|gb|EJK58570.1|6.629e-13057.62hypothetical protein THAOC_21295 [Thalassiosira oc... [more]
gi|673029578|ref|XP_008868750.1|1.494e-12755.05hypothetical protein H310_05718 [Aphanomyces invad... [more]
gi|223994087|ref|XP_002286727.1|6.179e-12658.13hypothetical protein THAPSDRAFT_31465 [Thalassiosi... [more]
gi|219119622|ref|XP_002180567.1|4.388e-12557.55predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|813178924|ref|XP_012205931.1|4.275e-12455.18hypothetical protein SPRG_11539 [Saprolegnia paras... [more]
gi|1173943826|gb|OQR92633.1|6.956e-12454.27ribosome production factor 1 [Achlya hypogyna][more]
gi|695429513|ref|XP_009530212.1|1.626e-12256.66hypothetical protein PHYSODRAFT_354905 [Phytophtho... [more]
gi|669151128|ref|XP_008611126.1|3.260e-12254.57hypothetical protein SDRG_07088 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna930rna930Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications