|
|
Properties
| Property Name | Value |
|---|
| Product | Aminotransferase, class IV |
| Orig transcript id | gnl|cribi|Naga_100022g10.865.mrna |
| Orig protein id | gnl|cribi|Naga_100022g10.865 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:681286..683329 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna901 ID=rna901|Name=rna901|organism=Nannochloropsis gaditana|type=mRNA|length=2197bp
CCCTCCATCTCACCCGTGAACGCGCACAGGGGCCAGTATAGACTACACAT
GGGCAGCCATCCGAGTACATAAACCTCGTCTACCACAAATCATTCGGCAT
GCTCGTGAAAGGCAGAATGCGTGGCCGTCCTGCCATCTGGCCTACCTACC
TCCTGACATTTACTCTCCCCATGTCGTTTGCCTGGTTTCCAACCCCCTTG
CACCCCTCCCATACTCCTGTCGCAAGAGGACAGATACGGGGAACGTTTTC
ATCCCGGTCTACCCCGTCGGAGGACGCCTGCCCGACGGAGTATCCGAAAT
CATCCTCGATCCCAGCCGAGACGCCATCAGACACGCCTCCGTCAGGCCGT
CCTGCGCGTGCTTGGAATACGATAAGCCGGCGTGGAGCTGTGGCTGCAGC
TTCCACTTTAATCCCTGCACTTATAAACGTAGGTATCCCAGCAGCAGGCG
GGGAAGGAAGGGCACAGGCGGCCTTGGAAGAATTTCCATGGGTGACCAAG
GGAGGTCTGTTGGATGGAGTCCTCCCGGAGTCGGTCCTAGTGGAATCTTT
GCCCTTGAACAATCAAGCCATTAAAGGAATGGGCCAAGCACTCAGTCGAA
TAAATGAACTTCGCGGATTGAATGTGCTACAGGGCTCAGGGCTCTGCAAT
GAAGCCGGTCAGGTAATCGCGGACCTCAGCTTTGTCACTGCAGCCACCTC
CGAGCCAGGCATGCTCAATACGACAGCAGCCGAAGACAATGGAGAACCAG
GAGACATATCCACATTCCGGTGGTCCAAAATAAAGGGTTTGGCAGAGAAC
GTCCGGGCGACGTACAACCGAGAAAAAGATGCGTTCCCCTACGCGCTGAC
GATCCGCCCGAACACGACGGCCGAGTCCCAAGCGAGGCGGCGGGTCCGCT
TCGCGAATGAGCTCCTCCTCTTGGATTTGGCAATCTCGAATCTGGAGAAC
GCTACTCAACACGAAAGCGTAGCGGACACGCTCCGATATCAAGAAGAGTC
CTTGCTCCATCTCGGGCATCTAGGGGAGCTTATGGTTGCGAAGTTCCCTT
TCTCCCCGCCGAAGAATGACGACCGTCGCGAGGACGATTATTTCAATCTC
CCAAGGCTCTTCGGACGAGCTGAGGTTATCTTTTTCCTGAAGGAGTTGGG
CAAAGATAAGGAGGGTAGCAACGGGAATAAGGAGGAAAATGGCGCTTTGA
AAACAGCGAACATGACAGTGATCGTGGATGGTTTCAATGCACCTATATCT
GCCGGAAATTTCATCGACTTGTGTCAGCGAGGTTTTTACAATCGCTTGCC
TCTCGTCACAGAGAAAGTTCGAAGCGGAAATAAGGATGACCAGGAGGTGG
AGCTGGTGGTGGGTGGGCGCTATAAGACGGGTTTCGTCGACCCCATTACG
GGAAAGCAGAGGCGGGTGCCGTTGGAGGTGATGCGCGCAGAACCAGAGGG
CAACCGTCCATTCTATGGCCAAGCGAGAAACACGGGCCTCTTTACTCGGG
CGCCGCCGCTGCTGTCTTATCGGACGCCTCGAGCGATCGGGCTGTTGCAT
CCTGAGCAAGACGGCAACGGCGCCAACAGCGAGTTCTTCTGGTTGCAGCG
TGACGCCCGATGTGTGGAAACGGCTAAGTCGTTGGATGGAAAGTTTACAT
TGATTGGATACGTGGTGGGAGGCGGGAGAGAAAACGACATCCTTCCGTTC
CTGGACGATAGCTTTCAGATCGAGTCGGTGCAAGTGTCATGGGGTTACGA
CCATCTCGTGCGCTCCCGCGTGGGTTTCATCGACATTCTTTTGCAGGGGG
ACGAGTAATGAAAGAGAGGAGATTGGACGAAGGAGCCAGAAGGTGGAATA
GGGCTTGTGGCGCCAAGCATTCTGCGGAGGGCCGGGAGGGGTGAGGGGGA
TCTCCTCTTGCTTTTTCGGCATAGCATCCAAATTTAGATTGTTCCTCGTA
GAGACTCGTTGCCGCCACAGGTTGGCTGGTGTACTCTAGTACATAGACAC
GTATATCAAGCGTGCAAGCTGGGAACGTTCTTCGCACGGCAAGTCCGCGT
ATCCCTTAAGAAGTTGGGCGTATACACCTAAGTTTCCTCCAAGTAGTGCC
AACAGTAGTGAATGGCACAATTTAAAATACCAGTTTGGTTTGAGAAAAAA
ATAAAGCGAAAAATAAAAACATGCATAACATGAAAGATCTTACTACC back to topprotein sequence of rna901 >rna901-protein ID=rna901-protein|Name=rna901|organism=Nannochloropsis gaditana|type=polypeptide|length=382bp
MRGVRGQCTAPKAVSQGLEGSVVNERAIWTLVTFSWLVAVLRTASVFPGR
AQPRSDSSSGLRARGRLPMAAYTEARVLIRASCTSTIFAVCSHEDSKTFL
ERHSRGAYTTARTVRGSKIFVLDAHVKRLSETAMLMWPDQALLADIVEPS
RLRAVVMKALRVAIEHHRSSHKPLGGQASISQEELKLTILFVWHTEDSML
ECLYHVSQLPLRPSPPIKVEVRGAPRSNAKAKDSGWVRERKRLEYLKPVD
TNEILLRDVDGALLEGTQTNFYVVMEGKLWTAGEGVLEGTVRKLVLEACA
AHHIPVILHPPPNLKDLQRWEGALLSSTSRLLLPIDWIGIPQETKSFQEG
DVCRAFKYENDCLTSRLVEWVDDNILQSSVDI back to topmRNA from alignment at CM002456.1:681286..683329- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna901 ID=rna901|Name=rna901|organism=Nannochloropsis gaditana|type=mRNA|length=2044bp|location=Sequence derived from alignment at CM002456.1:681286..683329- (Nannochloropsis gaditana)
GGAAGGCTTTCACGTTAAGGTGTGCTACTGCAACCAATGTGAGATATTTC
AATGTTCGCAAAAGACTCCGTGACTTCTTTCGCCATCTAGCATCACGCTG
TCCCATTCTCGGAAGCAAGAGGGATGATCCTGGTCCTAGCCCGAATTGCG
CGACGCCGCAAGCCTTATGTGGTCAAACCATCCGCAGGAGCTTGCAATGT
CGTCACCGAACACAATGTCCAAATCTGATGGTGTGGAAAGAAGGGAAGGG
CGCGCGAAGGGTGTAAGAGGGACCGCGAGGGGCGTCAGGGTGCGTGCACT
GGCAGGGCTCGTCCAGCGCCGCTTCAAGGAGGCTGCTCCTGGTGGGAGGT
ATGCGTGGCGTCCGAGGCCAATGCACTGCCCCCAAAGCCGTCTCTCAGGG
TTTAGAGGGCTCTGTCGTTAATGAACGAGCAATCTGGACATTGGTCACAT
TTTCATGGCTCGTTGCAGTGCTACGTACTGCATCCGTTTTCCCAGGAAGG
GCACAACCCCGTTCCGACTCCTCCTCAGGTCTTCGTGCCCGAGGTCGCCT
TCCTATGGCCGCTTATACGGAGGCGCGGGTCCTTATAAGGGCGTCATGTA
CTTCCACGATCTTTGCCGTATGCTCGCACGAAGACTCGAAGACTTTTTTG
GAAAGGCATTCAAGGTAATCCGCTCGTTTGCGTCACATTTAGCTCCTCTA
ACGAGAAGTGGCGATATTTCTCGGCAGAAAATGAAGAGGCCCTCACAAGA
AACTTACTCCTTTTCATGATTACTTCTTTTACTCATAGAGGTGCATATAC
AACAGCACGAACAGTGCGGGGAAGCAAAATTTTTGTGCTTGATGCGCATG
TCAAACGGTTGTCAGAAACAGCCATGCTCATGTGGCCAGATCAAGGTACT
GTGTCACCGTACTCGAATCATCAATGCTCGACGATACCGGGGCCAAGTTG
CGGGGTTGAATGATGTTTGAGGCTGTCATGGGATGCTTGTGATGCCGCGA
CCTGACTGCCTTGTGTCACCTTCTATTCCTAGCGCTGCTGGCGGATATCG
TCGAGCCCTCTCGTTTGAGAGCTGTGGTCATGAAGGCTCTCCGCGTCGCC
ATCGAGCACCACAGGTAACTTTTTGTTATACCATTCGAATAGCAAATAAA
GAGTCTACTTATTTTTCAAAGAAGCGAATCATCGCTATCCTCACAATGGG
CACTAAAAAATTACACCATTCCTCCCTTACATCAAGGTCAAGTCATAAGC
CCCTGGGCGGACAGGCCTCCATCTCGCAGGAGGAACTCAAGTTGACAATA
CTCTTTGTATGGCACACAGAAGATAGTATGCTAGAGTGTCTTTATCATGT
ATCTCAACTGCCTCTCCGGCCCTCGCCACCCATCAAGGTCGAAGTACGGG
GGGCGCCGCGGTCGAATGCCAAGGCCAAAGACTCCGGATGGGTTCGCGAG
AGAAAGCGGCTTGAATATTTGAAGCCTGTGGATACTAATGAGATACTTCT
CCGGGACGTGGATGGTGCGCTTTTAGAGGGAACGCAGACGAATTTCTATG
TCGTGATGGAGGGGAAACTGTGGACAGCTGGTGAAGGAGTCTTAGAGGGC
ACTGTACGAAAGCTCGTGCTTGAGGCATGTGCCGCCCATCATATCCCCGT
GATACTACACCCGCCACCGAACCTGAAAGATTTGCAGCGCTGGGAAGGCG
CGCTGCTCAGTTCCACGTCACGTCTGCTTTTGCCTATTGACTGGATAGGC
ATTCCTCAGGAGACGAAGTCCTTTCAAGAGGGGGACGTATGCCGTGCCTT
CAAGTACGAAAACGACTGCTTGACTTCGCGCTTAGTTGAATGGGTCGATG
ATAATATTTTACAATCGAGTGTCGATATATAGCCCCGAAAAAAACAAAAA
GCAATACATGGTAACCTCCTGGTAGTCGACGGCAAAGGATCCTAATTCCA
CGCGACAAAAGTTCATAACACACCTTTCTTTTTGAAGATCGCGTGATAGC
TGATGGAGAGTAAATTACCCGTGCCTTTTTAAAATCGGACTCTA back to topCoding sequence (CDS) from alignment at CM002456.1:681286..683329- >rna901 ID=rna901|Name=rna901|organism=Nannochloropsis gaditana|type=CDS|length=4596bp|location=Sequence derived from alignment at CM002456.1:681286..683329- (Nannochloropsis gaditana)
GTCAAGTCATAAGCCCCTGGGCGGACAGGCCTCCATCTCGCAGGAGGAAC
TCAAGTTGACAATACTCTTTGTATGGCACACAGAAGATAGTATGCTAGAG
TGTCTTTATCATGTATCTCAACTGCCTCTCCGGCCCTCGCCACCCATCAA
GGTCGAAGTACGGGGGGCGCCGCGGTCGAATGCCAAGGCCAAAGACTCCG
GATGGGTTCGCGAGAGAAAGCGGCTTGAATATTTGAAGCCTGTGGATACT
AATGAGATACTTCTCCGGGACGTGGATGGTGCGCTTTTAGAGGGAACGCA
GACGAATTTCTATGTCGTGATGGAGGGGAAACTGTGGACAGCTGGTGAAG
GAGTCTTAGAGGGCACTGTACGAAAGCTCGTGCTTGAGGCATGTGCCGCC
CATCATATCCCCGTGATACTACACCCGCCACCGAACCTGAAAGATTTGCA
GCGCTGGGAAGGCGCGCTGCTCAGTTCCACGTCACGTCTGCTTTTGCCTA
TTGACTGGATAGGCATTCCTCAGGAGACGAAGTCCTTTCAAGAGGGGGAC
GTATGCCGTGCCTTCAAGTACGAAAACGACTGCTTGACTTCGCGCTTAGT
TGAATGGGTCGATGATAATATTTTACAATCGAGTGTCGATATATAGCGCT
GCTGGCGGATATCGTCGAGCCCTCTCGTTTGAGAGCTGTGGTCATGAAGG
CTCTCCGCGTCGCCATCGAGCACCACAGAGGTGCATATACAACAGCACGA
ACAGTGCGGGGAAGCAAAATTTTTGTGCTTGATGCGCATGTCAAACGGTT
GTCAGAAACAGCCATGCTCATGTGGCCAGATCAAGATGCGTGGCGTCCGA
GGCCAATGCACTGCCCCCAAAGCCGTCTCTCAGGGTTTAGAGGGCTCTGT
CGTTAATGAACGAGCAATCTGGACATTGGTCACATTTTCATGGCTCGTTG
CAGTGCTACGTACTGCATCCGTTTTCCCAGGAAGGGCACAACCCCGTTCC
GACTCCTCCTCAGGTCTTCGTGCCCGAGGTCGCCTTCCTATGGCCGCTTA
TACGGAGGCGCGGGTCCTTATAAGGGCGTCATGTACTTCCACGATCTTTG
CCGTATGCTCGCACGAAGACTCGAAGACTTTTTTGGAAAGGCATTCAAGG
TCAAGTCATAAGCCCCTGGGCGGACAGGCCTCCATCTCGCAGGAGGAACT
CAAGTTGACAATACTCTTTGTATGGCACACAGAAGATAGTATGCTAGAGT
GTCTTTATCATGTATCTCAACTGCCTCTCCGGCCCTCGCCACCCATCAAG
GTCGAAGTACGGGGGGCGCCGCGGTCGAATGCCAAGGCCAAAGACTCCGG
ATGGGTTCGCGAGAGAAAGCGGCTTGAATATTTGAAGCCTGTGGATACTA
ATGAGATACTTCTCCGGGACGTGGATGGTGCGCTTTTAGAGGGAACGCAG
ACGAATTTCTATGTCGTGATGGAGGGGAAACTGTGGACAGCTGGTGAAGG
AGTCTTAGAGGGCACTGTACGAAAGCTCGTGCTTGAGGCATGTGCCGCCC
ATCATATCCCCGTGATACTACACCCGCCACCGAACCTGAAAGATTTGCAG
CGCTGGGAAGGCGCGCTGCTCAGTTCCACGTCACGTCTGCTTTTGCCTAT
TGACTGGATAGGCATTCCTCAGGAGACGAAGTCCTTTCAAGAGGGGGACG
TATGCCGTGCCTTCAAGTACGAAAACGACTGCTTGACTTCGCGCTTAGTT
GAATGGGTCGATGATAATATTTTACAATCGAGTGTCGATATATAGCGCTG
CTGGCGGATATCGTCGAGCCCTCTCGTTTGAGAGCTGTGGTCATGAAGGC
TCTCCGCGTCGCCATCGAGCACCACAGAGGTGCATATACAACAGCACGAA
CAGTGCGGGGAAGCAAAATTTTTGTGCTTGATGCGCATGTCAAACGGTTG
TCAGAAACAGCCATGCTCATGTGGCCAGATCAAGATGCGTGGCGTCCGAG
GCCAATGCACTGCCCCCAAAGCCGTCTCTCAGGGTTTAGAGGGCTCTGTC
GTTAATGAACGAGCAATCTGGACATTGGTCACATTTTCATGGCTCGTTGC
AGTGCTACGTACTGCATCCGTTTTCCCAGGAAGGGCACAACCCCGTTCCG
ACTCCTCCTCAGGTCTTCGTGCCCGAGGTCGCCTTCCTATGGCCGCTTAT
ACGGAGGCGCGGGTCCTTATAAGGGCGTCATGTACTTCCACGATCTTTGC
CGTATGCTCGCACGAAGACTCGAAGACTTTTTTGGAAAGGCATTCAAGGT
CAAGTCATAAGCCCCTGGGCGGACAGGCCTCCATCTCGCAGGAGGAACTC
AAGTTGACAATACTCTTTGTATGGCACACAGAAGATAGTATGCTAGAGTG
TCTTTATCATGTATCTCAACTGCCTCTCCGGCCCTCGCCACCCATCAAGG
TCGAAGTACGGGGGGCGCCGCGGTCGAATGCCAAGGCCAAAGACTCCGGA
TGGGTTCGCGAGAGAAAGCGGCTTGAATATTTGAAGCCTGTGGATACTAA
TGAGATACTTCTCCGGGACGTGGATGGTGCGCTTTTAGAGGGAACGCAGA
CGAATTTCTATGTCGTGATGGAGGGGAAACTGTGGACAGCTGGTGAAGGA
GTCTTAGAGGGCACTGTACGAAAGCTCGTGCTTGAGGCATGTGCCGCCCA
TCATATCCCCGTGATACTACACCCGCCACCGAACCTGAAAGATTTGCAGC
GCTGGGAAGGCGCGCTGCTCAGTTCCACGTCACGTCTGCTTTTGCCTATT
GACTGGATAGGCATTCCTCAGGAGACGAAGTCCTTTCAAGAGGGGGACGT
ATGCCGTGCCTTCAAGTACGAAAACGACTGCTTGACTTCGCGCTTAGTTG
AATGGGTCGATGATAATATTTTACAATCGAGTGTCGATATATAGCGCTGC
TGGCGGATATCGTCGAGCCCTCTCGTTTGAGAGCTGTGGTCATGAAGGCT
CTCCGCGTCGCCATCGAGCACCACAGAGGTGCATATACAACAGCACGAAC
AGTGCGGGGAAGCAAAATTTTTGTGCTTGATGCGCATGTCAAACGGTTGT
CAGAAACAGCCATGCTCATGTGGCCAGATCAAGATGCGTGGCGTCCGAGG
CCAATGCACTGCCCCCAAAGCCGTCTCTCAGGGTTTAGAGGGCTCTGTCG
TTAATGAACGAGCAATCTGGACATTGGTCACATTTTCATGGCTCGTTGCA
GTGCTACGTACTGCATCCGTTTTCCCAGGAAGGGCACAACCCCGTTCCGA
CTCCTCCTCAGGTCTTCGTGCCCGAGGTCGCCTTCCTATGGCCGCTTATA
CGGAGGCGCGGGTCCTTATAAGGGCGTCATGTACTTCCACGATCTTTGCC
GTATGCTCGCACGAAGACTCGAAGACTTTTTTGGAAAGGCATTCAAGGTC
AAGTCATAAGCCCCTGGGCGGACAGGCCTCCATCTCGCAGGAGGAACTCA
AGTTGACAATACTCTTTGTATGGCACACAGAAGATAGTATGCTAGAGTGT
CTTTATCATGTATCTCAACTGCCTCTCCGGCCCTCGCCACCCATCAAGGT
CGAAGTACGGGGGGCGCCGCGGTCGAATGCCAAGGCCAAAGACTCCGGAT
GGGTTCGCGAGAGAAAGCGGCTTGAATATTTGAAGCCTGTGGATACTAAT
GAGATACTTCTCCGGGACGTGGATGGTGCGCTTTTAGAGGGAACGCAGAC
GAATTTCTATGTCGTGATGGAGGGGAAACTGTGGACAGCTGGTGAAGGAG
TCTTAGAGGGCACTGTACGAAAGCTCGTGCTTGAGGCATGTGCCGCCCAT
CATATCCCCGTGATACTACACCCGCCACCGAACCTGAAAGATTTGCAGCG
CTGGGAAGGCGCGCTGCTCAGTTCCACGTCACGTCTGCTTTTGCCTATTG
ACTGGATAGGCATTCCTCAGGAGACGAAGTCCTTTCAAGAGGGGGACGTA
TGCCGTGCCTTCAAGTACGAAAACGACTGCTTGACTTCGCGCTTAGTTGA
ATGGGTCGATGATAATATTTTACAATCGAGTGTCGATATATAGCGCTGCT
GGCGGATATCGTCGAGCCCTCTCGTTTGAGAGCTGTGGTCATGAAGGCTC
TCCGCGTCGCCATCGAGCACCACAGAGGTGCATATACAACAGCACGAACA
GTGCGGGGAAGCAAAATTTTTGTGCTTGATGCGCATGTCAAACGGTTGTC
AGAAACAGCCATGCTCATGTGGCCAGATCAAGATGCGTGGCGTCCGAGGC
CAATGCACTGCCCCCAAAGCCGTCTCTCAGGGTTTAGAGGGCTCTGTCGT
TAATGAACGAGCAATCTGGACATTGGTCACATTTTCATGGCTCGTTGCAG
TGCTACGTACTGCATCCGTTTTCCCAGGAAGGGCACAACCCCGTTCCGAC
TCCTCCTCAGGTCTTCGTGCCCGAGGTCGCCTTCCTATGGCCGCTTATAC
GGAGGCGCGGGTCCTTATAAGGGCGTCATGTACTTCCACGATCTTTGCCG
TATGCTCGCACGAAGACTCGAAGACTTTTTTGGAAAGGCATTCAAG back to top
|