EWM29747.1, cds897 (CDS) Nannochloropsis gaditana

Overview
NameEWM29747.1
Unique Namecds897
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:670207..670284 -
Alignment locationCM002456.1:669905..669958 -
Alignment locationCM002456.1:669661..669858 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29747.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g6.846.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:670207..670284 -
CM002456.1supercontigCM002456.1:669905..669958 -
CM002456.1supercontigCM002456.1:669661..669858 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29747.1 vs. NCBI_GenBank
Match: gi|585112327|gb|EWM29747.1| (hypothetical protein Naga_100022g6 [Nannochloropsis gaditana])

HSP 1 Score: 228.024 bits (580), Expect = 8.760e-76
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 
Query:    1 MCRFLCIFQHLSLHLGPWPWRSMIQLHSPAQRHDGTCFETPCHSNQAVIIQAGRILLHYNYLVCCHLRDARNVWNLRIRYTDLQQRHAAHDGAHITPQRRAVEISPFYI 109
            MCRFLCIFQHLSLHLGPWPWRSMIQLHSPAQRHDGTCFETPCHSNQAVIIQAGRILLHYNYLVCCHLRDARNVWNLRIRYTDLQQRHAAHDGAHITPQRRAVEISPFYI
Sbjct:    1 MCRFLCIFQHLSLHLGPWPWRSMIQLHSPAQRHDGTCFETPCHSNQAVIIQAGRILLHYNYLVCCHLRDARNVWNLRIRYTDLQQRHAAHDGAHITPQRRAVEISPFYI 109
The following BLAST results are available for this feature:
BLAST of EWM29747.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112327|gb|EWM29747.1|8.760e-76100.00hypothetical protein Naga_100022g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna897rna897Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications