rna897, rna897 (mRNA) Nannochloropsis gaditana

Overview
Namerna897
Unique Namerna897
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1503
Alignment locationCM002456.1:669661..670284 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g6.846.mrna
Orig protein idgnl|cribi|Naga_100022g6.846
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:669661..670284 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100022g6gene860Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna897rna897-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29747.1cds897Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna897 ID=rna897|Name=rna897|organism=Nannochloropsis gaditana|type=mRNA|length=1503bp
ATGCCTCTATTAAAGAAAAGGAAGTGTGGTCGCGGCTGGTTTGGGCCTAA
AGTCCTGGTCGCCTTCACCGTGTCTTCATGCACTTGGCCGCTCGCTGTGG
CCTTCAGCTCTTTCAATCCCCTCCCGCGCGGTGGCTATCCCACTCTACCG
CCTGCAGGCTTGCAACGCAACGCCAGAGGGCCGAGTTTACTGCCACAGAC
ATTTAATATCCCAGCTCCAAGCGTTTCAAAGTTTAGTGGCCATATGAATC
ATGTGCTGCCTCCGCTTCGAAGTCCGCAGGGCTCTCACGAAGTTGGACAT
CGTGTCGGAAACCAGGCGCAAGTCGCTTGTCGGACTTTGTCGTATTTGGC
AGTTACTGGGTCTTTTCTAGCCCGTAGAAGAAGACAGCAGCGATGCTTAT
CGCGTGTCCACCCATTGCAAAGCTCGGCTGCCGCGTCTCCCATGGATGAG
GGGGAAGAGAGCTGGAGCGCAAGCGAACTTCCCTCCTACAGAGAACGACC
CCGGGGAGCCCCGGCATGGACACCCACGTGGATTGTGACGCTGCATCCAC
TCATCCAGATGCTCGTCATGGTGGCATTATATTTCTTTCACATGCTCGTG
CTGTCCAAGGTAGCCATGCCGTTTCCATTTCAGCTGGTGCCGAACACCCA
CGGTCTTTTCCAATCCATAGGCATGGATTCACTCGCAGGTCTTCTGGTCC
TCGGAGCTGCGGCCTACTTTCGGCGCGCCCGAGGGCTTCCGTTGAAGCCG
GTGGTGTTCGGAGCTCGACCCCTGCCCTTCAACCCCCCCAAAAGGGGGCG
GGGGAAGGTATGGCGCATCCTCTTTCTTCTCATGGTCGCCTACCTGACTT
CAGGCTCGGCATCCAAATGGGTAGAGGATGTCTTTGGTCTGTCCGAGCTG
AACGTGGCGCTGGGTCGCGCGGTGCAGGTGCTGGCCGGTCACCTGGTTTG
GGTCCTCCTCGGCGTGGGCATCCTCAAGACTCAGGCGGGAGAGGGCGGAG
ACAAGCCTTTTTTCGGGAAGAAGAGCGTGTGGATGAAGTCGAGCTGGAAC
ACGTACTGGCTGTGGTGGGCGATTGGCGGATACTACGTGTCTTCGCTGGC
GTTTCACGTCGCCGACACAGTCAACCAGGTGGTGTTGCCGGCCTCGGCCT
TTGAAGTGGATTCGGTCGTGACGCAGATGATCAACCCGGAGGGTAACGAT
GTCGTTGCCATGCTGGTGGGCTCCCTCGCGCCCTGTGTATCCGCCCCGTG
GTGGGAGGAAGTCCTGTACCGTGGCTTTCTCCTTCCGGCATTGTACCTCT
TCTACCCTGCCGACGTTGCCACGCTTGTCAGTGCGGTCATTTTTGCCGCG
CACCACATGAGTATGAGTGGGATGATCCCCCTGACGACCCTAGGATACCT
GTGGGCCGTCCTCTACCTGTTATCAGGAAACCTCCTTGTCCCCATAGCAA
TCCATTCGCTTTGGAATTCACGTGTGTTTTTAGGATCTCTTCTCGGAATA
TAA
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protein sequence of rna897

>rna897-protein ID=rna897-protein|Name=rna897|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MCRFLCIFQHLSLHLGPWPWRSMIQLHSPAQRHDGTCFETPCHSNQAVII
QAGRILLHYNYLVCCHLRDARNVWNLRIRYTDLQQRHAAHDGAHITPQRR
AVEISPFYI
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mRNA from alignment at CM002456.1:669661..670284-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna897 ID=rna897|Name=rna897|organism=Nannochloropsis gaditana|type=mRNA|length=624bp|location=Sequence derived from alignment at CM002456.1:669661..670284- (Nannochloropsis gaditana)
ATGTGCCGTTTCCTGTGCATTTTCCAGCACCTGAGCCTGCATCTTGGGCC
CTGGCCGTGGAGGTCGATGATCCAATTAGTATGAATACAGGTGAAATACA
CTTGTTTCTAGTGTCTCCCAAAAAAGCATTTTATTCACTTCGCCGCCGAG
TTAAAATCTCACCTCCCTCTGTGACAACATCCTCCCGAAGCCGTGCCGAG
CCTTCCCCGCCAGTTGCTGGCGCGTACATATCTTGCTTGCTGACATCATG
TAAATCTGTAGTCTGTATTAGGATGACAGATGTGACATAGCTAGAAGCAT
CTTACAAATGTACCATACGCGCACAGCACTCCCCGGCTCAAAGGCACGAT
GGAACATGCTTTGAAACGCCTTGTCACTCAGTGCTATTTGGGGTAACAAT
AGCACACAGCTGATCCATCGAGTTAGAACCAGGCGGTTATAATACAGGCG
GGAAGAATACTTCTACACTACAATTATTTAGTCTGCTGCCACCTACGGGA
TGCGAGAAACGTCTGGAATCTCAGAATAAGATATACGGACCTGCAACAGC
GCCATGCAGCTCATGATGGCGCCCACATCACGCCGCAACGCCGTGCGGTC
GAAATTTCCCCCTTCTATATCTAG
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Coding sequence (CDS) from alignment at CM002456.1:669661..670284-

>rna897 ID=rna897|Name=rna897|organism=Nannochloropsis gaditana|type=CDS|length=990bp|location=Sequence derived from alignment at CM002456.1:669661..670284- (Nannochloropsis gaditana)
AACCAGGCGGTTATAATACAGGCGGGAAGAATACTTCTACACTACAATTA
TTTAGTCTGCTGCCACCTACGGGATGCGAGAAACGTCTGGAATCTCAGAA
TAAGATATACGGACCTGCAACAGCGCCATGCAGCTCATGATGGCGCCCAC
ATCACGCCGCAACGCCGTGCGGTCGAAATTTCCCCCTTCTATATCTAGCA
CTCCCCGGCTCAAAGGCACGATGGAACATGCTTTGAAACGCCTTGTCACT
CAATGTGCCGTTTCCTGTGCATTTTCCAGCACCTGAGCCTGCATCTTGGG
CCCTGGCCGTGGAGGTCGATGATCCAATTAAACCAGGCGGTTATAATACA
GGCGGGAAGAATACTTCTACACTACAATTATTTAGTCTGCTGCCACCTAC
GGGATGCGAGAAACGTCTGGAATCTCAGAATAAGATATACGGACCTGCAA
CAGCGCCATGCAGCTCATGATGGCGCCCACATCACGCCGCAACGCCGTGC
GGTCGAAATTTCCCCCTTCTATATCTAGCACTCCCCGGCTCAAAGGCACG
ATGGAACATGCTTTGAAACGCCTTGTCACTCAATGTGCCGTTTCCTGTGC
ATTTTCCAGCACCTGAGCCTGCATCTTGGGCCCTGGCCGTGGAGGTCGAT
GATCCAATTAAACCAGGCGGTTATAATACAGGCGGGAAGAATACTTCTAC
ACTACAATTATTTAGTCTGCTGCCACCTACGGGATGCGAGAAACGTCTGG
AATCTCAGAATAAGATATACGGACCTGCAACAGCGCCATGCAGCTCATGA
TGGCGCCCACATCACGCCGCAACGCCGTGCGGTCGAAATTTCCCCCTTCT
ATATCTAGCACTCCCCGGCTCAAAGGCACGATGGAACATGCTTTGAAACG
CCTTGTCACTCAATGTGCCGTTTCCTGTGCATTTTCCAGCACCTGAGCCT
GCATCTTGGGCCCTGGCCGTGGAGGTCGATGATCCAATTA
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Synonyms
Publications