EWM29809.1, cds863 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|585112390|gb|EWM29809.1| (Nascent polypeptide-associated complex NAC [Nannochloropsis gaditana]) HSP 1 Score: 340.117 bits (871), Expect = 3.775e-118 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0 Query: 1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVST 169 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVST Sbjct: 1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVST 169
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|676394967|ref|XP_009040761.1| (hypothetical protein AURANDRAFT_59495 [Aureococcus anophagefferens] >gi|323448611|gb|EGB04507.1| hypothetical protein AURANDRAFT_59495 [Aureococcus anophagefferens]) HSP 1 Score: 186.037 bits (471), Expect = 1.869e-57 Identity = 94/157 (59.87%), Postives = 118/157 (75.16%), Query Frame = 0 Query: 12 MIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168 MIA+RFGGA+ RTGGKG+VRRK+K HKT+ T+DDKKLG+TLKKLGVTNIP IEE N+F + G+V+HF NPKVQASI A TYV+SG ETK + +LLPGI+ QLG +NI L KQ+ + P+ + +++E DDD VPDL+ENFE VS Sbjct: 1 MIARRFGGAQQSRTGGKGSVRRKKKTMHKTA-TSDDKKLGSTLKKLGVTNIPAIEEVNLFTSDGKVVHFSNPKVQASIAANTYVVSGPNETKQLTELLPGIMNQLGPDNIDHL-KQIADKMSYSNRAPSAS----SKDDEIDDDEVPDLIENFEDVS 151
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|298714046|emb|CBJ27278.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 177.178 bits (448), Expect = 4.372e-54 Identity = 99/162 (61.11%), Postives = 113/162 (69.75%), Query Frame = 0 Query: 7 AARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168 AAR RMIA+RFGGA RTGG VRRK+K HKT+ T+DDKKL TLK++GVTNIP IEE NMFKN GEVIHF PKVQAS+ A TYV+SG +ETK +QDLLPGII +LG EN+ L + G G A AG DD+D VPDLVENFE S Sbjct: 2 AARERMIARRFGGANATRTGG---VRRKKKNVHKTA-TSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKEIAGNFPGG----EAGAG--------DDEDDVPDLVENFEEAS 147
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|676392549|ref|XP_009039552.1| (hypothetical protein AURANDRAFT_38346 [Aureococcus anophagefferens] >gi|323449828|gb|EGB05713.1| hypothetical protein AURANDRAFT_38346 [Aureococcus anophagefferens]) HSP 1 Score: 176.022 bits (445), Expect = 2.255e-53 Identity = 97/165 (58.79%), Postives = 121/165 (73.33%), Query Frame = 0 Query: 5 IDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGE-NEEDDDDAVPDLVENFEAVS 168 + AAR +MIA+RFGGA+ RTGGKG++RRK+K HKT+ T+DDKKLG+TLKKLGVTNIP IEE N+F G+V+HF NPKVQASI A TYV+SG E+K + +LLPGI+ QLG +NI L + ++ G G A + G +DDDD VPDLVENFE VS Sbjct: 3 VVAAREKMIARRFGGAQQSRTGGKGSIRRKKKTVHKTA-TSDDKKLGSTLKKLGVTNIPAIEEVNLFTADGKVVHFSNPKVQASIAANTYVVSGPNESKQLTELLPGIMNQLGPDNINHLKQIADSMSLGSGNAQESAAVGAGAVGIDDDDDDVPDLVENFEDVS 166
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|675168895|ref|XP_008893332.1| (hypothetical protein PPTG_01700 [Phytophthora parasitica INRA-310] >gi|566022164|gb|ETI45075.1| hypothetical protein F443_10255 [Phytophthora parasitica P1569] >gi|567959479|gb|ETK85050.1| hypothetical protein L915_10030 [Phytophthora parasitica] >gi|567988191|gb|ETL38472.1| hypothetical protein L916_09937 [Phytophthora parasitica] >gi|568017415|gb|ETL91592.1| hypothetical protein L917_09860 [Phytophthora parasitica] >gi|568047818|gb|ETM44886.1| hypothetical protein L914_09911 [Phytophthora parasitica] >gi|568106921|gb|ETN21551.1| hypothetical protein PPTG_01700 [Phytophthora parasitica INRA-310] >gi|570325790|gb|ETO73738.1| hypothetical protein F444_10354 [Phytophthora parasitica P1976] >gi|570949635|gb|ETP14892.1| hypothetical protein F441_10192 [Phytophthora parasitica CJ01A1] >gi|570983062|gb|ETP42960.1| hypothetical protein F442_10159 [Phytophthora parasitica P10297] >gi|970636032|gb|KUF80770.1| Transcription factor BTF3 [Phytophthora nicotianae] >gi|970650133|gb|KUF89235.1| TRAF3-interacting protein 1 [Phytophthora nicotianae] >gi|970652096|gb|KUF90820.1| Transcription factor BTF3 [Phytophthora nicotianae]) HSP 1 Score: 170.244 bits (430), Expect = 3.533e-51 Identity = 101/168 (60.12%), Postives = 121/168 (72.02%), Query Frame = 0 Query: 1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168 MAD I AR R+ AK FG +VRTGGKGTVRRKRKA HKT+ TADDKKLGATLKKLGVT IPG+EE N+FK G+VIHF++PKVQASI + TY +SG +TKS+Q+LLPGII QLG +N+ L ++A+ A +DDDD VPDLV+NFE VS Sbjct: 1 MADAITLARERLAAK-FG---DVRTGGKGTVRRKRKAAHKTA-TADDKKLGATLKKLGVTPIPGVEEVNLFKADGQVIHFQSPKVQASIASNTYAVSGFNQTKSLQELLPGIINQLGPDNL----ANLKQIAESYTAAQKAAKAASAAAADDDDDEVPDLVDNFEDVS 159
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|301108163|ref|XP_002903163.1| (transcription factor BTF3-like protein [Phytophthora infestans T30-4] >gi|301108327|ref|XP_002903245.1| transcription factor BTF3-like protein [Phytophthora infestans T30-4] >gi|262097535|gb|EEY55587.1| transcription factor BTF3-like protein [Phytophthora infestans T30-4] >gi|262097617|gb|EEY55669.1| transcription factor BTF3-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 169.088 bits (427), Expect = 1.065e-50 Identity = 101/168 (60.12%), Postives = 120/168 (71.43%), Query Frame = 0 Query: 1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168 MAD I AR R+ AK FG +VRTGGKGTVRRKRKA HKT+ TADDKKLGATLKKLGVT IPG+EE N+FK G+VIHF+ PKVQASI + TY +SG +TKS+Q+LLPGII QLG +N+ L ++A+ A +DDDD VPDLV+NFE VS Sbjct: 1 MADAITLARERLAAK-FG---DVRTGGKGTVRRKRKAAHKTA-TADDKKLGATLKKLGVTPIPGVEEVNLFKADGQVIHFQAPKVQASIASNTYAVSGFNQTKSLQELLPGIINQLGPDNL----ANLKQIAESYTAAQKAAKAASTAAADDDDDEVPDLVDNFEDVS 159
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|695433198|ref|XP_009531123.1| (hypothetical protein PHYSODRAFT_355007 [Phytophthora sojae] >gi|328496506|gb|AEB21382.1| transcription factor BTF3-like protein [Phytophthora sojae] >gi|348673875|gb|EGZ13694.1| hypothetical protein PHYSODRAFT_355007 [Phytophthora sojae] >gi|1214693031|gb|OWZ07472.1| Transcription factor BTF3 [Phytophthora megakarya]) HSP 1 Score: 168.703 bits (426), Expect = 1.399e-50 Identity = 101/168 (60.12%), Postives = 120/168 (71.43%), Query Frame = 0 Query: 1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168 MAD I AR R+ AK FG +VRTGGKGTVRRKRKA HKT+ TADDKKLGATLKKLGVT IPG+EE N+FK G+VIHF+ PKVQASI + TY +SG +TKS+Q+LLPGII QLG +N+ L ++A+ A +DDDD VPDLV+NFE VS Sbjct: 1 MADAIALARERLAAK-FG---DVRTGGKGTVRRKRKAAHKTA-TADDKKLGATLKKLGVTPIPGVEEVNLFKADGQVIHFQAPKVQASIASNTYAVSGFNQTKSLQELLPGIINQLGPDNL----ANLKQIAESYTAAQKAAKAASAAAADDDDDEVPDLVDNFEDVS 159
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|551546214|ref|XP_005761040.1| (hypothetical protein EMIHUDRAFT_438269 [Emiliania huxleyi CCMP1516] >gi|485609683|gb|EOD08611.1| hypothetical protein EMIHUDRAFT_438269 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 164.081 bits (414), Expect = 7.728e-49 Identity = 88/146 (60.27%), Postives = 108/146 (73.97%), Query Frame = 0 Query: 20 AENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFE 165 A VRTGGKG+VRRK+KA HKT++T DDK+L TLK+LGV NIP IEE N+FK+ G V+HF NPKVQASI A TYV+SG AETK +Q+LLPGII QLG +N+ L K++ E + GG G + EDD+D VPDLV+NFE Sbjct: 10 AAQVRTGGKGSVRRKKKAVHKTTTT-DDKRLQNTLKRLGVNNIPAIEEVNLFKDNGTVVHFNNPKVQASIAANTYVVSGQAETKKLQELLPGIINQLGPDNLANL-KKIAESYQAGG-----PGQIPTGDAEDDED-VPDLVDNFE 147
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|551655516|ref|XP_005830532.1| (hypothetical protein GUITHDRAFT_163787 [Guillardia theta CCMP2712] >gi|428174658|gb|EKX43552.1| hypothetical protein GUITHDRAFT_163787 [Guillardia theta CCMP2712]) HSP 1 Score: 160.229 bits (404), Expect = 2.174e-47 Identity = 90/147 (61.22%), Postives = 108/147 (73.47%), Query Frame = 0 Query: 23 VRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPK-VQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168 VRTGGKG+VRRK+KA HK S+T DDK+L TLK+LGV NIPGIEE N+F++ G VIHF+NPK VQASI A TYVISG AE K +QDLLPGII QLG +N++ L K++ E G G AG G + DDD VP+LVE+FE S Sbjct: 15 VRTGGKGSVRRKKKAVHK-SATTDDKRLQNTLKRLGVNNIPGIEEVNLFRDNGSVIHFKNPKQVQASIGANTYVISGTAENKKLQDLLPGIINQLGPDNLENL-KKIAEQFTGPG---QAAG---GSGDAKDDDDVPELVEDFEQAS 153
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|219112757|ref|XP_002178130.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411015|gb|EEC50944.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 159.844 bits (403), Expect = 3.565e-47 Identity = 92/158 (58.23%), Postives = 113/158 (71.52%), Query Frame = 0 Query: 12 MIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVE-NFEAVS 168 MIAKRFGGA + TGGKG+VRRK+K +++S D KL +TLKKLG TNIPGIEE N FK G+VIHF+NPKVQA++ A TY+ISG +ETK +Q+LLP I+ QLG +N+ +L A G A A + EGE E+DDDD VPDLVE NFE S Sbjct: 1 MIAKRFGGA-STSTGGKGSVRRKKKVATRSNSAQTDAKLTSTLKKLGATNIPGIEEVNFFKEDGKVIHFKNPKVQAAVAANTYIISGPSETKPLQELLPSIVSQLGMDNLASLQNMAQGAASG-----APAAIPEGE-EDDDDDDVPDLVEGNFEEAS 151 The following BLAST results are available for this feature:
BLAST of EWM29809.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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