rna863, rna863 (mRNA) Nannochloropsis gaditana

Overview
Namerna863
Unique Namerna863
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1345
Alignment locationCM002456.1:594538..596219 +

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Properties
Property NameValue
ProductNascent polypeptide-associated complex NAC
Orig transcript idgnl|cribi|Naga_100017g54.307.mrna
Orig protein idgnl|cribi|Naga_100017g54.307
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:594538..596219 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100017g54gene826Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna863rna863-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29809.1cds863Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna863 ID=rna863|Name=rna863|organism=Nannochloropsis gaditana|type=mRNA|length=1345bp
AGAAGATCGATTAAAGACAGGTCCCGCAACACGTCGAGCAGCAAGGGAGC
TTGGCCTGACTTGTCGGGCACGAGCATGCGTCGACGTTGACCATGGGGGT
TTGATTCTTATTTAGTGCTCTTTTTGATCACGTTGCGGTGGCAACACTCC
GACGCACAGGAAATTTGAGTGCTACGACGTAGCTCCTTGCACTGCAACCC
ATCAAGATTTCCCTGTTGTTCTCCACCATGCTTCTCCGTCCAAAAAGGAA
GCAACCGGGCAGAGTGCAGATACGAACAACGCTGCACCTACTGGCGTTGA
TTGTGTTGTCCACCACTCTCGTCCAGGGAGGCCTGGGGCTGGGGGACTAC
CGCATCGACTTTGATTTCTTGGGCGGTGAAGGAGATCTCAGTCCGGCACA
GTATCGCGCCTACCTACAGAGCAAAACACCCGTCACACCACGAGGGAAGA
AATACTCCTCCCCACTGTGGTACCTCTACTCCCCGAATATACCCAAGATA
GAGCGGGATGCGCAGCTCGCAGAGTTGCGCTACGTGGAACAGCAGCTGGG
TATCAAATTTTGGAAGGTCAAAGTGGACAGCGAGAAGAAAGAGAGATTTT
TGAAGAGTTTGGCAGAAGCCTCGGAGCCCCCACCGGATAACAAATTGCCA
CGACGCTTCCGCGAAGAAGCGTCCCCGAGTCCTGCAACGCCGTTTTTCTA
CAACCTCAATACGGGCAAAAGTATTTCAGGTATGACGTCATCCACGAATC
TGAAAAAGTGGGCGCTAGGCAAAGACTATCAGGACGGCCCATGGCAAGGC
TTTTCTTCCCCGCAGTTCCAAGACCTTTTGGCCCGCACGGGGGACGATGG
CGAGCAGGAGTACATGGACAAGTACAGCAATCATGCTTGGATTCTGCGCT
ACCGGAAAGAGCGTGACGCTGCGCTTGCAGCGCATAAGAAGCAATACAAC
CGGCGCATGTTTCTTTCGCGCTTTGGTTTAGCAAGAGCTCCAACAGGTGA
CGCATTCGAGCGTTTCATCGAAATAGATCGGACCAAGGAGCGCGAACAAG
AGGTGCGGAAAGGCTGGGTGAAACCGTCACGCTCTCGCCCAACACCGCTT
TCTGTGCGCAGTACCAAAAGTATACTGGGTCGCAGTGACAAGAAAAAGAA
AAGTACGGAGGAAAAAAAAAGAGCGCGAACTGGGAAAAGATGACCAAGTT
GGATGTTGGTCACGAAACGCCAATCCGCACTCACGATAAAAACTAAACTT
AAAGGCCATGGGAATATTAGAGCCATGCTTTAAACTTTAAATTAAATACG
TATTACTCATGAAACACCGTTTTTGACCAAGCGCCTCGACCTCCC
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protein sequence of rna863

>rna863-protein ID=rna863-protein|Name=rna863|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKL
GATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAA
ETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENE
EDDDDAVPDLVENFEAVST
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mRNA from alignment at CM002456.1:594538..596219+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna863 ID=rna863|Name=rna863|organism=Nannochloropsis gaditana|type=mRNA|length=1682bp|location=Sequence derived from alignment at CM002456.1:594538..596219+ (Nannochloropsis gaditana)
CCTGCAGGCGAGCGCCTCAACCACtaaccctccctcgcccagcccctccc
ctcccttctttttcgaTCGCATGGAAGCCGTGCCGGAGCACCCTCgcttt
cgctcctcccttcagggTTTTATTTTGATTGGCATGTTGCCTGTGGTTTT
ACCTCTCTGCTTGGTCCCACTGGTTTGTGGAAGGGGCAGCTTGTGACAGA
AGGAGGCTCTCCATCCTACGAGTTGCTTCCATCAGCCTGCTTTCCCTCAG
TGCCTCGCAGCCGCCACGGCCACCTATATTTTCCTTACCACATTCAAAAG
CATGGCAAAGCTTCGATGTCGATGGCTTTGAGAATAGGGCACCCTTTGTG
CCAAACGTTTGGCCCCCAAAGTGCTCTTGGACGTGGAAGAGTATCATTCC
GCCCGTGTTCTCTGTGGTCTTAGTATCAACTGCCAAATTCACTCTTGCAG
GCCTACGTACACTCTCTAGGCCAATCCCAGCAGCAGTGacagcagccgca
gcagtATGGCGGACGGGATTGATGCCGCCCGCGCGCGCATGATAGCAAAG
CGCTTTGGGGGAGCCGAGAACGTGAGaacaggaggcaaggggacgGTGCG
ACGGAAGCGTAAGGCGCAGCACAAGACTTCTTCGACTGCGGACGACAAGA
AACTCGGTGCAACGCTTAAGAAGCTGGGTGTGACAAACATCCCGGGCATA
GAGGAGGCGAACATGTTTAAGAATACCGGGGAGGTCATCCATTTCAGAAA
CCCTAAGGGTGAGATGGCTGGGCGGGATGATTCGGATCGAGCACGCTCGA
AAATAATGATAGATAACTGGTGGCTGAAGGGGCCAGATCTGTATCTCGTT
GTCAGAGCTTGTTCCCTGAAacgagagagaagaggagcgaaTCCGGTCGC
TCATCTCTCCATCCTGTCCATAACACAGTGCAAGCGTCTATCCAGGCCAA
GACATACGTCATCAGCGGTGCCGCAGAGACAAAAAGCATCCAAGACCTTC
TTCCAGGTATCATCCAACAGTTGGGAGGTGAAAATATTCAGGCTTTGAGC
AAGCAACTGGGTGAGCTCGCCAAGGGTGGGGGTCTGGACCCGGCACTggc
gggcatggaggagggagagaatgaagaggacgatgatgatgCGGTTCCCG
ACTTGGTCGAGAATTTTGAGGTGAGTTGTGAATATGTGCTATTATGCCGT
GGGTGTGGCTTGACGTCATCAAGCACGGCCGTTACCTGAACGTTGCTGAC
AAGTATTACTTTCCCCCTTAACAGGCCGTCTCGACGTAAGAGGGTTTTAT
GATCGCTCCTCAATGCcaatcttcttcttctctacTTCCTCACTTGCTAT
GCAGTCCAAGGGAGTAGAAAGGTAGATCAAAGTCCGAGAAAGGGCAGGTT
TTCTGAGGGCTGAATCTTTCATTTCTGAGGGCCTGATATGTGGGTCGAGC
GGGGAGTGCGCCGTTCACGTTCATTGCTCTCGTCAATCGTGAAACCATCT
TTTAAAATATGCATGCAACTTCATTTGGTGGAGAAGAGAGCATGGTGCGT
AGAGGCATTAGCTTTCCGTCGTTGGAATCAGAGTAGGGGAACCGACCAGA
CAAAATAGACTTAAGGCACGCTGGCAACGATGAGACCAGGCGGAGATTCA
GAAAGAAAGAACTCTTACAACTTAATTGAGCC
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Coding sequence (CDS) from alignment at CM002456.1:594538..596219+

>rna863 ID=rna863|Name=rna863|organism=Nannochloropsis gaditana|type=CDS|length=1530bp|location=Sequence derived from alignment at CM002456.1:594538..596219+ (Nannochloropsis gaditana)
ATGGCGGACGGGATTGATGCCGCCCGCGCGCGCATGATAGCAAAGCGCTT
TGGGGGAGCCGAGAACGTGAGaacaggaggcaaggggacgGTGCGACGGA
AGCGTAAGGCGCAGCACAAGACTTCTTCGACTGCGGACGACAAGAAACTC
GGTGCAACGCTTAAGAAGCTGGGTGTGACAAACATCCCGGGCATAGAGGA
GGCGAACATGTTTAAGAATACCGGGGAGGTCATCCATTTCAGAAACCCTA
AGGTGCAAGCGTCTATCCAGGCCAAGACATACGTCATCAGCGGTGCCGCA
GAGACAAAAAGCATCCAAGACCTTCTTCCAGGTATCATCCAACAGTTGGG
AGGTGAAAATATTCAGGCTTTGAGCAAGCAACTGGGTGAGCTCGCCAAGG
GTGGGGGTCTGGACCCGGCACTggcgggcatggaggagggagagaatgaa
gaggacgatgatgatgCGGTTCCCGACTTGGTCGAGAATTTTGAGGCCGT
CTCGACGTAAATGGCGGACGGGATTGATGCCGCCCGCGCGCGCATGATAG
CAAAGCGCTTTGGGGGAGCCGAGAACGTGAGaacaggaggcaaggggacg
GTGCGACGGAAGCGTAAGGCGCAGCACAAGACTTCTTCGACTGCGGACGA
CAAGAAACTCGGTGCAACGCTTAAGAAGCTGGGTGTGACAAACATCCCGG
GCATAGAGGAGGCGAACATGTTTAAGAATACCGGGGAGGTCATCCATTTC
AGAAACCCTAAGGTGCAAGCGTCTATCCAGGCCAAGACATACGTCATCAG
CGGTGCCGCAGAGACAAAAAGCATCCAAGACCTTCTTCCAGGTATCATCC
AACAGTTGGGAGGTGAAAATATTCAGGCTTTGAGCAAGCAACTGGGTGAG
CTCGCCAAGGGTGGGGGTCTGGACCCGGCACTggcgggcatggaggaggg
agagaatgaagaggacgatgatgatgCGGTTCCCGACTTGGTCGAGAATT
TTGAGGCCGTCTCGACGTAAATGGCGGACGGGATTGATGCCGCCCGCGCG
CGCATGATAGCAAAGCGCTTTGGGGGAGCCGAGAACGTGAGaacaggagg
caaggggacgGTGCGACGGAAGCGTAAGGCGCAGCACAAGACTTCTTCGA
CTGCGGACGACAAGAAACTCGGTGCAACGCTTAAGAAGCTGGGTGTGACA
AACATCCCGGGCATAGAGGAGGCGAACATGTTTAAGAATACCGGGGAGGT
CATCCATTTCAGAAACCCTAAGGTGCAAGCGTCTATCCAGGCCAAGACAT
ACGTCATCAGCGGTGCCGCAGAGACAAAAAGCATCCAAGACCTTCTTCCA
GGTATCATCCAACAGTTGGGAGGTGAAAATATTCAGGCTTTGAGCAAGCA
ACTGGGTGAGCTCGCCAAGGGTGGGGGTCTGGACCCGGCACTggcgggca
tggaggagggagagaatgaagaggacgatgatgatgCGGTTCCCGACTTG
GTCGAGAATTTTGAGGCCGTCTCGACGTAA
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Synonyms
Publications