EWM29809.1, cds863 (CDS) Nannochloropsis gaditana

Overview
NameEWM29809.1
Unique Namecds863
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:595043..595295 +
Alignment locationCM002456.1:595466..595707 +
Alignment locationCM002456.1:595812..595826 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29809.1
ProductNascent polypeptide-associated complex NAC
Orig transcript idgnl|cribi|Naga_100017g54.307.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:595043..595295 +
CM002456.1supercontigCM002456.1:595466..595707 +
CM002456.1supercontigCM002456.1:595812..595826 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR002715Nas_poly-pep-assoc_cplx_dom
Homology
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|585112390|gb|EWM29809.1| (Nascent polypeptide-associated complex NAC [Nannochloropsis gaditana])

HSP 1 Score: 340.117 bits (871), Expect = 3.775e-118
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query:    1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVST 169
            MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVST
Sbjct:    1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVST 169          
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|676394967|ref|XP_009040761.1| (hypothetical protein AURANDRAFT_59495 [Aureococcus anophagefferens] >gi|323448611|gb|EGB04507.1| hypothetical protein AURANDRAFT_59495 [Aureococcus anophagefferens])

HSP 1 Score: 186.037 bits (471), Expect = 1.869e-57
Identity = 94/157 (59.87%), Postives = 118/157 (75.16%), Query Frame = 0
Query:   12 MIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168
            MIA+RFGGA+  RTGGKG+VRRK+K  HKT+ T+DDKKLG+TLKKLGVTNIP IEE N+F + G+V+HF NPKVQASI A TYV+SG  ETK + +LLPGI+ QLG +NI  L KQ+ +        P+ +     +++E DDD VPDL+ENFE VS
Sbjct:    1 MIARRFGGAQQSRTGGKGSVRRKKKTMHKTA-TSDDKKLGSTLKKLGVTNIPAIEEVNLFTSDGKVVHFSNPKVQASIAANTYVVSGPNETKQLTELLPGIMNQLGPDNIDHL-KQIADKMSYSNRAPSAS----SKDDEIDDDEVPDLIENFEDVS 151          
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|298714046|emb|CBJ27278.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 177.178 bits (448), Expect = 4.372e-54
Identity = 99/162 (61.11%), Postives = 113/162 (69.75%), Query Frame = 0
Query:    7 AARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168
            AAR RMIA+RFGGA   RTGG   VRRK+K  HKT+ T+DDKKL  TLK++GVTNIP IEE NMFKN GEVIHF  PKVQAS+ A TYV+SG +ETK +QDLLPGII +LG EN+  L +  G    G     A AG        DD+D VPDLVENFE  S
Sbjct:    2 AARERMIARRFGGANATRTGG---VRRKKKNVHKTA-TSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKEIAGNFPGG----EAGAG--------DDEDDVPDLVENFEEAS 147          
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|676392549|ref|XP_009039552.1| (hypothetical protein AURANDRAFT_38346 [Aureococcus anophagefferens] >gi|323449828|gb|EGB05713.1| hypothetical protein AURANDRAFT_38346 [Aureococcus anophagefferens])

HSP 1 Score: 176.022 bits (445), Expect = 2.255e-53
Identity = 97/165 (58.79%), Postives = 121/165 (73.33%), Query Frame = 0
Query:    5 IDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGE-NEEDDDDAVPDLVENFEAVS 168
            + AAR +MIA+RFGGA+  RTGGKG++RRK+K  HKT+ T+DDKKLG+TLKKLGVTNIP IEE N+F   G+V+HF NPKVQASI A TYV+SG  E+K + +LLPGI+ QLG +NI  L +    ++ G G     A +  G    +DDDD VPDLVENFE VS
Sbjct:    3 VVAAREKMIARRFGGAQQSRTGGKGSIRRKKKTVHKTA-TSDDKKLGSTLKKLGVTNIPAIEEVNLFTADGKVVHFSNPKVQASIAANTYVVSGPNESKQLTELLPGIMNQLGPDNINHLKQIADSMSLGSGNAQESAAVGAGAVGIDDDDDDVPDLVENFEDVS 166          
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|675168895|ref|XP_008893332.1| (hypothetical protein PPTG_01700 [Phytophthora parasitica INRA-310] >gi|566022164|gb|ETI45075.1| hypothetical protein F443_10255 [Phytophthora parasitica P1569] >gi|567959479|gb|ETK85050.1| hypothetical protein L915_10030 [Phytophthora parasitica] >gi|567988191|gb|ETL38472.1| hypothetical protein L916_09937 [Phytophthora parasitica] >gi|568017415|gb|ETL91592.1| hypothetical protein L917_09860 [Phytophthora parasitica] >gi|568047818|gb|ETM44886.1| hypothetical protein L914_09911 [Phytophthora parasitica] >gi|568106921|gb|ETN21551.1| hypothetical protein PPTG_01700 [Phytophthora parasitica INRA-310] >gi|570325790|gb|ETO73738.1| hypothetical protein F444_10354 [Phytophthora parasitica P1976] >gi|570949635|gb|ETP14892.1| hypothetical protein F441_10192 [Phytophthora parasitica CJ01A1] >gi|570983062|gb|ETP42960.1| hypothetical protein F442_10159 [Phytophthora parasitica P10297] >gi|970636032|gb|KUF80770.1| Transcription factor BTF3 [Phytophthora nicotianae] >gi|970650133|gb|KUF89235.1| TRAF3-interacting protein 1 [Phytophthora nicotianae] >gi|970652096|gb|KUF90820.1| Transcription factor BTF3 [Phytophthora nicotianae])

HSP 1 Score: 170.244 bits (430), Expect = 3.533e-51
Identity = 101/168 (60.12%), Postives = 121/168 (72.02%), Query Frame = 0
Query:    1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168
            MAD I  AR R+ AK FG   +VRTGGKGTVRRKRKA HKT+ TADDKKLGATLKKLGVT IPG+EE N+FK  G+VIHF++PKVQASI + TY +SG  +TKS+Q+LLPGII QLG +N+      L ++A+        A        +DDDD VPDLV+NFE VS
Sbjct:    1 MADAITLARERLAAK-FG---DVRTGGKGTVRRKRKAAHKTA-TADDKKLGATLKKLGVTPIPGVEEVNLFKADGQVIHFQSPKVQASIASNTYAVSGFNQTKSLQELLPGIINQLGPDNL----ANLKQIAESYTAAQKAAKAASAAAADDDDDEVPDLVDNFEDVS 159          
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|301108163|ref|XP_002903163.1| (transcription factor BTF3-like protein [Phytophthora infestans T30-4] >gi|301108327|ref|XP_002903245.1| transcription factor BTF3-like protein [Phytophthora infestans T30-4] >gi|262097535|gb|EEY55587.1| transcription factor BTF3-like protein [Phytophthora infestans T30-4] >gi|262097617|gb|EEY55669.1| transcription factor BTF3-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 169.088 bits (427), Expect = 1.065e-50
Identity = 101/168 (60.12%), Postives = 120/168 (71.43%), Query Frame = 0
Query:    1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168
            MAD I  AR R+ AK FG   +VRTGGKGTVRRKRKA HKT+ TADDKKLGATLKKLGVT IPG+EE N+FK  G+VIHF+ PKVQASI + TY +SG  +TKS+Q+LLPGII QLG +N+      L ++A+        A        +DDDD VPDLV+NFE VS
Sbjct:    1 MADAITLARERLAAK-FG---DVRTGGKGTVRRKRKAAHKTA-TADDKKLGATLKKLGVTPIPGVEEVNLFKADGQVIHFQAPKVQASIASNTYAVSGFNQTKSLQELLPGIINQLGPDNL----ANLKQIAESYTAAQKAAKAASTAAADDDDDEVPDLVDNFEDVS 159          
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|695433198|ref|XP_009531123.1| (hypothetical protein PHYSODRAFT_355007 [Phytophthora sojae] >gi|328496506|gb|AEB21382.1| transcription factor BTF3-like protein [Phytophthora sojae] >gi|348673875|gb|EGZ13694.1| hypothetical protein PHYSODRAFT_355007 [Phytophthora sojae] >gi|1214693031|gb|OWZ07472.1| Transcription factor BTF3 [Phytophthora megakarya])

HSP 1 Score: 168.703 bits (426), Expect = 1.399e-50
Identity = 101/168 (60.12%), Postives = 120/168 (71.43%), Query Frame = 0
Query:    1 MADGIDAARARMIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168
            MAD I  AR R+ AK FG   +VRTGGKGTVRRKRKA HKT+ TADDKKLGATLKKLGVT IPG+EE N+FK  G+VIHF+ PKVQASI + TY +SG  +TKS+Q+LLPGII QLG +N+      L ++A+        A        +DDDD VPDLV+NFE VS
Sbjct:    1 MADAIALARERLAAK-FG---DVRTGGKGTVRRKRKAAHKTA-TADDKKLGATLKKLGVTPIPGVEEVNLFKADGQVIHFQAPKVQASIASNTYAVSGFNQTKSLQELLPGIINQLGPDNL----ANLKQIAESYTAAQKAAKAASAAAADDDDDEVPDLVDNFEDVS 159          
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|551546214|ref|XP_005761040.1| (hypothetical protein EMIHUDRAFT_438269 [Emiliania huxleyi CCMP1516] >gi|485609683|gb|EOD08611.1| hypothetical protein EMIHUDRAFT_438269 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 164.081 bits (414), Expect = 7.728e-49
Identity = 88/146 (60.27%), Postives = 108/146 (73.97%), Query Frame = 0
Query:   20 AENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFE 165
            A  VRTGGKG+VRRK+KA HKT++T DDK+L  TLK+LGV NIP IEE N+FK+ G V+HF NPKVQASI A TYV+SG AETK +Q+LLPGII QLG +N+  L K++ E  + GG      G     + EDD+D VPDLV+NFE
Sbjct:   10 AAQVRTGGKGSVRRKKKAVHKTTTT-DDKRLQNTLKRLGVNNIPAIEEVNLFKDNGTVVHFNNPKVQASIAANTYVVSGQAETKKLQELLPGIINQLGPDNLANL-KKIAESYQAGG-----PGQIPTGDAEDDED-VPDLVDNFE 147          
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|551655516|ref|XP_005830532.1| (hypothetical protein GUITHDRAFT_163787 [Guillardia theta CCMP2712] >gi|428174658|gb|EKX43552.1| hypothetical protein GUITHDRAFT_163787 [Guillardia theta CCMP2712])

HSP 1 Score: 160.229 bits (404), Expect = 2.174e-47
Identity = 90/147 (61.22%), Postives = 108/147 (73.47%), Query Frame = 0
Query:   23 VRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPK-VQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVENFEAVS 168
            VRTGGKG+VRRK+KA HK S+T DDK+L  TLK+LGV NIPGIEE N+F++ G VIHF+NPK VQASI A TYVISG AE K +QDLLPGII QLG +N++ L K++ E   G G     AG   G  +  DDD VP+LVE+FE  S
Sbjct:   15 VRTGGKGSVRRKKKAVHK-SATTDDKRLQNTLKRLGVNNIPGIEEVNLFRDNGSVIHFKNPKQVQASIGANTYVISGTAENKKLQDLLPGIINQLGPDNLENL-KKIAEQFTGPG---QAAG---GSGDAKDDDDVPELVEDFEQAS 153          
BLAST of EWM29809.1 vs. NCBI_GenBank
Match: gi|219112757|ref|XP_002178130.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411015|gb|EEC50944.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 159.844 bits (403), Expect = 3.565e-47
Identity = 92/158 (58.23%), Postives = 113/158 (71.52%), Query Frame = 0
Query:   12 MIAKRFGGAENVRTGGKGTVRRKRKAQHKTSSTADDKKLGATLKKLGVTNIPGIEEANMFKNTGEVIHFRNPKVQASIQAKTYVISGAAETKSIQDLLPGIIQQLGGENIQALSKQLGELAKGGGLDPALAGMEEGENEEDDDDAVPDLVE-NFEAVS 168
            MIAKRFGGA +  TGGKG+VRRK+K   +++S   D KL +TLKKLG TNIPGIEE N FK  G+VIHF+NPKVQA++ A TY+ISG +ETK +Q+LLP I+ QLG +N+ +L       A G     A A + EGE E+DDDD VPDLVE NFE  S
Sbjct:    1 MIAKRFGGA-STSTGGKGSVRRKKKVATRSNSAQTDAKLTSTLKKLGATNIPGIEEVNFFKEDGKVIHFKNPKVQAAVAANTYIISGPSETKPLQELLPSIVSQLGMDNLASLQNMAQGAASG-----APAAIPEGE-EDDDDDDVPDLVEGNFEEAS 151          
The following BLAST results are available for this feature:
BLAST of EWM29809.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112390|gb|EWM29809.1|3.775e-118100.00Nascent polypeptide-associated complex NAC [Nannoc... [more]
gi|676394967|ref|XP_009040761.1|1.869e-5759.87hypothetical protein AURANDRAFT_59495 [Aureococcus... [more]
gi|298714046|emb|CBJ27278.1|4.372e-5461.11conserved unknown protein [Ectocarpus siliculosus][more]
gi|676392549|ref|XP_009039552.1|2.255e-5358.79hypothetical protein AURANDRAFT_38346 [Aureococcus... [more]
gi|675168895|ref|XP_008893332.1|3.533e-5160.12hypothetical protein PPTG_01700 [Phytophthora para... [more]
gi|301108163|ref|XP_002903163.1|1.065e-5060.12transcription factor BTF3-like protein [Phytophtho... [more]
gi|695433198|ref|XP_009531123.1|1.399e-5060.12hypothetical protein PHYSODRAFT_355007 [Phytophtho... [more]
gi|551546214|ref|XP_005761040.1|7.728e-4960.27hypothetical protein EMIHUDRAFT_438269 [Emiliania ... [more]
gi|551655516|ref|XP_005830532.1|2.174e-4761.22hypothetical protein GUITHDRAFT_163787 [Guillardia... [more]
gi|219112757|ref|XP_002178130.1|3.565e-4758.23predicted protein [Phaeodactylum tricornutum CCAP ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna863rna863Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications