rna793, rna793 (mRNA) Nannochloropsis gaditana

Overview
Namerna793
Unique Namerna793
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length663
Alignment locationCM002456.1:431456..434016 -

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Properties
Property NameValue
Productcytochrome b5
Orig transcript idgnl|cribi|Naga_100106g6.1453.mrna
Orig protein idgnl|cribi|Naga_100106g6.1453
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:431456..434016 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100106g6gene759Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna793rna793-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29879.1cds793Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna793 ID=rna793|Name=rna793|organism=Nannochloropsis gaditana|type=mRNA|length=663bp
ATGCAGCACGATTGGTCAGTGGTAGTGCTTCTAGAAGCTCTCCTGGCGTT
GTTGGTCCTCACGATTCCGGCACTATGGGAGGGTCGGGATGCCGCCATGA
TCGAGGTCAACGACAGCACACGCTTGCCACTTCCCACCCGCCTGTGGCGT
CTGGCTGGCATAATGGCCCTTGCCTCGTACACAAGCACCATTGTCACACA
CGCCACTGGTTTCTTGGAAATTGGGCCCAATGAAGCTCGGGAGCAAAGCC
TCAGATTCGTCGGCGGGGTGTTGATTGCAGCGCCGTATTTCTTCCTTTCA
GCCGTTGCTCTGGGAGCGCCGTGGAAAGAAATGGTGGATCGTACTGCGGC
GTGGGCCCTGATAATGGGCATATTGGTTGGTGGCCCCCTCGGTGCGGCTG
CTCCTAGCCTGCAACAACTGCGGTTGCCGCCTTTGTGGCAAGGTCCGCCG
GGCGAGACTGCTTTGATACGCTTTCGCGCACTGGGGTGCTGCGCGGGGGC
GTGGGTGGGTGCGTTTGTCGTACCATTGGACTGGGCCATGCCCTTCCAAG
AGTGGCCTCTACCTTTGGTTGTGGGAGCGGTTGCCGGGCACAGCCTGGGA
TCCTTCGCGGTCTACTGCGACCAGCGATGGACGCATGCCAAGGGTGTGGG
GCATGTCGACTGA
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protein sequence of rna793

>rna793-protein ID=rna793-protein|Name=rna793|organism=Nannochloropsis gaditana|type=polypeptide|length=330bp
MEPSELLGLVVALLALLGASALINVLFGHPTFFREADHLPSKASVPFPPP
TFPTPVHSPPPSVPDRLPVHIPKELFVSEVLLFLSPYEVTRLLPTSRYFH
LAGEHVTYWQHAWTRRLAGMRQPLKRRCEATRGPEELLTHECHNPKLEFF
RRMFVYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGG
PVDATAVFELSKHSLVARERMHSQYLMWDPTPCLGRGGTIAGLLNPSMWR
SAAACPAPSPSQVAQGGRFEGLLPSLLVLLTDLQRFCRGHITRRPVGATL
PRLVDDRRHLNGGGDRSPPNIVKILDEAHF
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mRNA from alignment at CM002456.1:431456..434016-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna793 ID=rna793|Name=rna793|organism=Nannochloropsis gaditana|type=mRNA|length=2561bp|location=Sequence derived from alignment at CM002456.1:431456..434016- (Nannochloropsis gaditana)
ATCGCCTTCTGACCACCCGCCATTTGCCGTGTGCCTTTGTCGGTCTTGTG GTAACTTCGCTTTGTGCGACGGTCGTGTTCTTGCCGCCCTTTGCACCGCG TCCGGTGGTTTGTTGGCTAGCACAAGCTCCCTTCGCTCGCTCTCAGAACC TCCTACTGCCTCCTCCCCCGCAGCTTTTCCGCTCTTGACAGGGCTGTGAA AAGTCGCGGCTGCAACGCATCCCACGAGTGACGGGAATGATTGTCCAGCG CAGGATGATGATGTCGAAGGGTGGAGCACCCATGCCTTTCCTGCAATCAA ACTGAGCAGGAAAAGAAAGGCAGCCGCCATTGCCCCTTTCCTTCCATTTA TCATGACAACGTGGTCAAGGGCAAGAGGTGGGTGCGTGGATCGAGCGTCT TGTCGAGGCCAAACACTGTGTGTGCGGACGTACGAAATGGACATGTATGT CGAGTTCAACCGGCTGGGACACGTTTCCTTTCACGAGCCTTCAAGTCACG CGGGAGGGCATGAGGTCATATCGGTGATATCGAGAACTTTGAGAGGGAGG AGCCCAGGGGATTTACCTTGGCCATTGTGCCATGATGCAGCGCAACTAAA CAAAAATAAATGTATGCACGACACTAGACTGCCAATTACCCTTTTGCAGG CCACATATAAGGGAATTGTGGACGTGTGTGGGAGCCATTTCGCCTTTCCC CTTCCCCATACTATGTAGTACTTACATGGACGAGGGACGACTCACAGCAT ATAATTTTTCGCAAAACAGAGGTTTGCTGCTACCCATCACCAGCCATGGA GCCTTCCGAGCTCCTAGGCTTGGTGGTGGCACTACTTGCTCTTTTGGGCG CCTCTGCACTCATCAATGTACTCTTCGGCCACCCAACTTTTTTTCGTGAA GCGGACCACCTGCCCTCGAAGGCGTCGGTTCCCTTCCCTCCACCTACCTT TCCCACGCCAGTGCATTCACCCCCACCGTCCGTACCTGATCGCCTTCCGG TCCATATTCCCAAAGAATTGTTCGTCTCTGAAGTCCTTCTCTTCCTCTCA CCCTATGAAGTGACTCGTCTCCTCCCAACCTCCCGCTATTTCCACCTTGC TGGCGAACACGTGACATACTGGCAGCATGCCTGGACGCGTAGGCTTGCGG GAATGCGACAACCCCTCAAACGACGTTGTGAGGCTACGAGAGGGCCTGAA GAGCTCTTGACACATGAGTGCCACAATCCCAAACTGGAATTTTTCCGCCG TATGTTCGTCTATCCCTACGAGCTTACTTATGCGCATTGCCATACCTATA CGTGTAGGATTATCGTCCATGGCAAGGTGCGTTTGTCAAATTCTGATGCC TCAAGCTTATGCGAGTCCAGTCTGCGCGTCGAAGCCGGTATTGTGTGACA AGTCTTGTCTTTTTTGAATGTGAGCAGGGGCACGGCCCTCTTTCACTCAA TCGATGCACATGCCCATTGATACTAGGTCTACGACGTGACGTCTTTCCTC TGGGCACATCCCGGTGGGGACGCCATCCTCTTGGAGTACGGGGGGCCCGT GGACGCGACAGCCGTCTTCGAACTCTCGAAGCACTCCTTGGTAGCCCGAG AGCGAATGCACAGCCAGTACCTAATGTGGGATCCAACGCCTTGTCTTGGC CGTGGTGGTACCATTGCGGGACTCTTAAACCCCTCCATGTGGCGCTCTGC TGCTGCTTGCCCCGCGCCGTCCCCTTCTCAGGTCGCCCAGGGCGGCCGCT TCGAAGGCCTGCTCCCTTCTTTGCTAGTGCTGCTGACCGATTTGCAGCGA TTTTGTCGAGGCCACATAACGCGGCGGCCAGTCGGAGCAACGTTGCCGCG TTTGGTAGATGATCGACGGCATTTGAATGGAGGCGGAGACCGGTCGCCCC CGAACATAGTCAAAATATTAGACGAGGCACACTTTTGACATTACATGGCT GTGTAGGAAATGCGATATGCACTTTTGCGAATATGAGCATGTATAGAGTG CGAGAAATGGGAAAAGAAGAGAAAAGATTGCTTGCTTACAATGCAGTCGT GCGTTCCAGTGCCACGCACACTTTTCGCAGCCTATGCAACGCTTTCGGCC ATTGACTTTGTCCATCATTTTTGTTTCCTCTCCGGCTTTCCCTTATCCCC TGCACAGTCCCGCCTTTGAGGCAACCAGCACGCGTCAGGATCATGCCGCA AGTGACTGGTGGTCAGGTTCTGGCCCAAATCTTGCGGGGCGCTTACGTGC GAGTCACTTCTTTCCTGGGCGACAACGGGTGGCCACTACTTATCATTCTG TTGCTGGTGCGGTGGTTGAAAGTCCAGGCGTTTGACCCGTGGAGGGAGAG GAGGAGGCAAGCCCGGATCTTGCGAGACGCCCAGAAAAGAGAGAGAGTAG AGGTTCTCGATAAGGATCTGCGGCGAGTGAGGGAAATGCAATTCAAAAAC TTAGTAGGCAAGGAAAAATAGAGTAAAAGGGGCGCCCGCAGCTCGACACC GCAACTTTCCATCAACTGTACTTGCAATAGACGCAATGAGCGCAACAACT CGTTACTTGTA
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Coding sequence (CDS) from alignment at CM002456.1:431456..434016-

>rna793 ID=rna793|Name=rna793|organism=Nannochloropsis gaditana|type=CDS|length=1986bp|location=Sequence derived from alignment at CM002456.1:431456..434016- (Nannochloropsis gaditana)
GTCTACGACGTGACGTCTTTCCTCTGGGCACATCCCGGTGGGGACGCCAT
CCTCTTGGAGTACGGGGGGCCCGTGGACGCGACAGCCGTCTTCGAACTCT
CGAAGCACTCCTTGGTAGCCCGAGAGCGAATGCACAGCCAGTACCTAATG
TGGGATCCAACGCCTTGTCTTGGCCGTGGTGGTACCATTGCGGGACTCTT
AAACCCCTCCATGTGGCGCTCTGCTGCTGCTTGCCCCGCGCCGTCCCCTT
CTCAGGTCGCCCAGGGCGGCCGCTTCGAAGGCCTGCTCCCTTCTTTGCTA
GTGCTGCTGACCGATTTGCAGCGATTTTGTCGAGGCCACATAACGCGGCG
GCCAGTCGGAGCAACGTTGCCGCGTTTGGTAGATGATCGACGGCATTTGA
ATGGAGGCGGAGACCGGTCGCCCCCGAACATAGTCAAAATATTAGACGAG
GCACACTTTTGAATGGAGCCTTCCGAGCTCCTAGGCTTGGTGGTGGCACT
ACTTGCTCTTTTGGGCGCCTCTGCACTCATCAATGTACTCTTCGGCCACC
CAACTTTTTTTCGTGAAGCGGACCACCTGCCCTCGAAGGCGTCGGTTCCC
TTCCCTCCACCTACCTTTCCCACGCCAGTGCATTCACCCCCACCGTCCGT
ACCTGATCGCCTTCCGGTCCATATTCCCAAAGAATTGTTCGTCTCTGAAG
TCCTTCTCTTCCTCTCACCCTATGAAGTGACTCGTCTCCTCCCAACCTCC
CGCTATTTCCACCTTGCTGGCGAACACGTGACATACTGGCAGCATGCCTG
GACGCGTAGGCTTGCGGGAATGCGACAACCCCTCAAACGACGTTGTGAGG
CTACGAGAGGGCCTGAAGAGCTCTTGACACATGAGTGCCACAATCCCAAA
CTGGAATTTTTCCGCCGTATGTTCGTCTATCCCTACGAGCTTACTTATGC
GCATTGCCATACCTATACGTGTAGGATTATCGTCCATGGCAAGGTCTACG
ACGTGACGTCTTTCCTCTGGGCACATCCCGGTGGGGACGCCATCCTCTTG
GAGTACGGGGGGCCCGTGGACGCGACAGCCGTCTTCGAACTCTCGAAGCA
CTCCTTGGTAGCCCGAGAGCGAATGCACAGCCAGTACCTAATGTGGGATC
CAACGCCTTGTCTTGGCCGTGGTGGTACCATTGCGGGACTCTTAAACCCC
TCCATGTGGCGCTCTGCTGCTGCTTGCCCCGCGCCGTCCCCTTCTCAGGT
CGCCCAGGGCGGCCGCTTCGAAGGCCTGCTCCCTTCTTTGCTAGTGCTGC
TGACCGATTTGCAGCGATTTTGTCGAGGCCACATAACGCGGCGGCCAGTC
GGAGCAACGTTGCCGCGTTTGGTAGATGATCGACGGCATTTGAATGGAGG
CGGAGACCGGTCGCCCCCGAACATAGTCAAAATATTAGACGAGGCACACT
TTTGAATGGAGCCTTCCGAGCTCCTAGGCTTGGTGGTGGCACTACTTGCT
CTTTTGGGCGCCTCTGCACTCATCAATGTACTCTTCGGCCACCCAACTTT
TTTTCGTGAAGCGGACCACCTGCCCTCGAAGGCGTCGGTTCCCTTCCCTC
CACCTACCTTTCCCACGCCAGTGCATTCACCCCCACCGTCCGTACCTGAT
CGCCTTCCGGTCCATATTCCCAAAGAATTGTTCGTCTCTGAAGTCCTTCT
CTTCCTCTCACCCTATGAAGTGACTCGTCTCCTCCCAACCTCCCGCTATT
TCCACCTTGCTGGCGAACACGTGACATACTGGCAGCATGCCTGGACGCGT
AGGCTTGCGGGAATGCGACAACCCCTCAAACGACGTTGTGAGGCTACGAG
AGGGCCTGAAGAGCTCTTGACACATGAGTGCCACAATCCCAAACTGGAAT
TTTTCCGCCGTATGTTCGTCTATCCCTACGAGCTTACTTATGCGCATTGC
CATACCTATACGTGTAGGATTATCGTCCATGGCAAG
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Synonyms
Publications