EWM29879.1, cds793 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|585112461|gb|EWM29879.1| (cytochrome b5 [Nannochloropsis gaditana]) HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0 Query: 1 MEPSELLGLVVALLALLGASALINVLFGHPTFFREADHLPSKASVPFPPPTFPTPVHSPPPSVPDRLPVHIPKELFVSEVLLFLSPYEVTRLLPTSRYFHLAGEHVTYWQHAWTRRLAGMRQPLKRRCEATRGPEELLTHECHNPKLEFFRRMFVYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYLMWDPTPCLGRGGTIAGLLNPSMWRSAAACPAPSPSQVAQGGRFEGLLPSLLVLLTDLQRFCRGHITRRPVGATLPRLVDDRRHLNGGGDRSPPNIVKILDEAHF 330 MEPSELLGLVVALLALLGASALINVLFGHPTFFREADHLPSKASVPFPPPTFPTPVHSPPPSVPDRLPVHIPKELFVSEVLLFLSPYEVTRLLPTSRYFHLAGEHVTYWQHAWTRRLAGMRQPLKRRCEATRGPEELLTHECHNPKLEFFRRMFVYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYLMWDPTPCLGRGGTIAGLLNPSMWRSAAACPAPSPSQVAQGGRFEGLLPSLLVLLTDLQRFCRGHITRRPVGATLPRLVDDRRHLNGGGDRSPPNIVKILDEAHF Sbjct: 1 MEPSELLGLVVALLALLGASALINVLFGHPTFFREADHLPSKASVPFPPPTFPTPVHSPPPSVPDRLPVHIPKELFVSEVLLFLSPYEVTRLLPTSRYFHLAGEHVTYWQHAWTRRLAGMRQPLKRRCEATRGPEELLTHECHNPKLEFFRRMFVYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYLMWDPTPCLGRGGTIAGLLNPSMWRSAAACPAPSPSQVAQGGRFEGLLPSLLVLLTDLQRFCRGHITRRPVGATLPRLVDDRRHLNGGGDRSPPNIVKILDEAHF 330
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|1175865154|ref|XP_020586418.1| (cytochrome b5-like [Phalaenopsis equestris] >gi|1175865156|ref|XP_020586419.1| cytochrome b5-like [Phalaenopsis equestris]) HSP 1 Score: 66.6254 bits (161), Expect = 5.211e-10 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 0 Query: 164 HCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYL 226 H T C +I+HGKVYDVTSF+ HPGGD +LL G DAT FE HS +AR+ +H Y+ Sbjct: 16 HNATKDCWLIIHGKVYDVTSFMDEHPGGDEVLLAATGK-DATNDFEDVGHSDIARDMIHKYYI 77
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|871223682|ref|XP_005095539.2| (PREDICTED: cytochrome b5 isoform A-like [Aplysia californica]) HSP 1 Score: 67.0106 bits (162), Expect = 6.332e-10 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 0 Query: 164 HCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYLMWDPT 231 HCH +C I+V+ KVYDVT FL HPGGD I+LEY G DAT+VF HS A E M ++Y + + T Sbjct: 71 HCHYDSCWIVVNNKVYDVTRFLRQHPGGDDIILEYAG-FDATSVFIDKGHSRDAYE-MLAEYFIGEVT 136
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|168024257|ref|XP_001764653.1| (predicted protein [Physcomitrella patens] >gi|162684231|gb|EDQ70635.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 66.6254 bits (161), Expect = 6.460e-10 Identity = 38/79 (48.10%), Postives = 42/79 (53.16%), Query Frame = 0 Query: 155 VYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYLMWDPTPC 233 VY E H H C +I+ GKVYDVT FL HPGGD +LL G DAT FE HS AR M YL+ D P Sbjct: 10 VYTLEEVSGHNHARDCWLIIGGKVYDVTKFLEDHPGGDEVLLSATGK-DATDDFEDVGHSTSARSMM-DDYLVGDIDPS 86
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|1072904753|ref|XP_018480427.1| (PREDICTED: cytochrome b5 [Raphanus sativus]) HSP 1 Score: 65.855 bits (159), Expect = 1.111e-9 Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 0 Query: 155 VYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYL 226 +Y E AH C I++ GKVYDVTS++ HPGGD +LL G DAT FE + HS ARE M ++ Sbjct: 7 IYSMEEVAAHNKQDDCWIVIDGKVYDVTSYMDEHPGGDDVLLAVTGK-DATDEFEDAGHSKTARELMEEYFI 77
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|848861099|ref|XP_012831375.1| (PREDICTED: cytochrome b5 isoform E-like [Erythranthe guttata] >gi|604343365|gb|EYU42285.1| hypothetical protein MIMGU_mgv1a017250mg [Erythranthe guttata]) HSP 1 Score: 64.3142 bits (155), Expect = 1.215e-9 Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 0 Query: 155 VYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERM 221 VY +E H + + C +I+ GKVYDVT+FL HPGGD LLE G DAT FE HS A+++M Sbjct: 5 VYTFEEVVKHNNNHDCWLIISGKVYDVTAFLADHPGGDETLLESTGK-DATGDFEDVGHSKDAKDKM 70
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|2695711|emb|CAA04703.1| (cytochome b5, partial [Olea europaea]) HSP 1 Score: 65.855 bits (159), Expect = 1.223e-9 Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 0 Query: 155 VYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYL 226 +Y YE H T C ++++GKVYDVT F+ HPGGD +LL G DAT FE HS ARE M Y+ Sbjct: 7 IYVYEEVEKHDKTKDCWLVINGKVYDVTPFMDDHPGGDEVLLSATGK-DATNDFEDVGHSDSAREMMDKYYI 77
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|802761855|ref|XP_012089900.1| (cytochrome b5 isoform X1 [Jatropha curcas] >gi|643706706|gb|KDP22680.1| hypothetical protein JCGZ_02465 [Jatropha curcas]) HSP 1 Score: 65.4698 bits (158), Expect = 1.695e-9 Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 0 Query: 155 VYPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYL 226 ++ +E H T C +I+ GKVYDVTSF+ HPGGD +LL G DAT FE HS AR+ M Y+ Sbjct: 7 IHKFEDVAVHNKTKDCWLIISGKVYDVTSFMDDHPGGDEVLLSSTGK-DATNDFEDVGHSDSARDMMEKYYI 77
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|719964326|ref|XP_010252345.1| (PREDICTED: cytochrome b5 [Nelumbo nucifera] >gi|719964329|ref|XP_010252353.1| PREDICTED: cytochrome b5 [Nelumbo nucifera]) HSP 1 Score: 65.0846 bits (157), Expect = 1.741e-9 Identity = 35/71 (49.30%), Postives = 41/71 (57.75%), Query Frame = 0 Query: 156 YPYELTYAHCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYL 226 Y +E H T C +I+ GKVYDVTSF+ HPGGD +LL G DAT FE HS ARE M Y+ Sbjct: 8 YLFEEVAEHNKTKDCWLIISGKVYDVTSFMDDHPGGDEVLLAATGK-DATNDFEDVGHSDSAREIMEKYYI 77
BLAST of EWM29879.1 vs. NCBI_GenBank
Match: gi|1072927968|ref|XP_018474734.1| (PREDICTED: cytochrome b5 [Raphanus sativus]) HSP 1 Score: 65.0846 bits (157), Expect = 1.909e-9 Identity = 36/69 (52.17%), Postives = 42/69 (60.87%), Query Frame = 0 Query: 164 HCHTYTCRIIVHGKVYDVTSFLWAHPGGDAILLEYGGPVDATAVFELSKHSLVARERMHSQYL-MWDPT 231 H H + C II++GKVY+VT FL HPGGD +LL G DAT FE HS ARE M Y+ DPT Sbjct: 16 HNHAHDCWIIINGKVYNVTKFLEDHPGGDEVLLSSTGK-DATDDFEDVGHSESAREMMEQYYVGEIDPT 83 The following BLAST results are available for this feature:
BLAST of EWM29879.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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