EWM29871.1, cds792 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|585112453|gb|EWM29871.1| (phosphatidylinositol-glycan biosynthesis class f [Nannochloropsis gaditana]) HSP 1 Score: 436.802 bits (1122), Expect = 9.674e-155 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 Query: 1 MQHDWSVVVLLEALLALLVLTIPALWEGRDAAMIEVNDSTRLPLPTRLWRLAGIMALASYTSTIVTHATGFLEIGPNEAREQSLRFVGGVLIAAPYFFLSAVALGAPWKEMVDRTAAWALIMGILVGGPLGAAAPSLQQLRLPPLWQGPPGETALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLGSFAVYCDQRWTHAKGVGHVD 220 MQHDWSVVVLLEALLALLVLTIPALWEGRDAAMIEVNDSTRLPLPTRLWRLAGIMALASYTSTIVTHATGFLEIGPNEAREQSLRFVGGVLIAAPYFFLSAVALGAPWKEMVDRTAAWALIMGILVGGPLGAAAPSLQQLRLPPLWQGPPGETALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLGSFAVYCDQRWTHAKGVGHVD Sbjct: 1 MQHDWSVVVLLEALLALLVLTIPALWEGRDAAMIEVNDSTRLPLPTRLWRLAGIMALASYTSTIVTHATGFLEIGPNEAREQSLRFVGGVLIAAPYFFLSAVALGAPWKEMVDRTAAWALIMGILVGGPLGAAAPSLQQLRLPPLWQGPPGETALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLGSFAVYCDQRWTHAKGVGHVD 220
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|1126216685|ref|XP_019642364.1| (PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein-like [Branchiostoma belcheri]) HSP 1 Score: 70.4774 bits (171), Expect = 2.791e-11 Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 0 Query: 86 FVGGVL---IAAPYFFLSAVALGAPWKEMVDRTAAWALIMGILVGGPLGAAAPSLQQLRLPPLWQGPPGET-ALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLG 200 FV G L ++ F + AV GAP +E + T +WAL+M L P S + + + P E + ++ L GAW+GAF +PLDW P+Q WP+P +GA+ GH++G Sbjct: 80 FVKGFLFFLLSILSFHIIAVLYGAPLQEDTEETFSWALLMATLTALPCWCMLGSRLETWVAVVLNRPESENESFLQTTVLCTVVGAWLGAFPIPLDWDRPWQVWPIPCSIGALLGHTVG 198
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|260803794|ref|XP_002596774.1| (hypothetical protein BRAFLDRAFT_211692 [Branchiostoma floridae] >gi|229282034|gb|EEN52786.1| hypothetical protein BRAFLDRAFT_211692, partial [Branchiostoma floridae]) HSP 1 Score: 67.3958 bits (163), Expect = 9.272e-11 Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 0 Query: 82 QSLRFVGGVL---IAAPYFFLSAVALGAPWKEMVDRTAAWALIMGILVGGPLGAAAPSLQQLRLPPLWQGPPGET-ALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLG 200 Q FV G L ++ F + AV GAP +E + T +WAL+M L P S + + + P E + ++ L GAW+GAF +PLDW P+Q WP+P +GA+ GH+ G Sbjct: 1 QISSFVKGFLFFLLSILSFHVIAVLYGAPLQEDTEETFSWALLMATLTALPCWCMLGSRLETWVAVVLNRPESEIESFLQTTVLCTVVGAWLGAFPIPLDWDRPWQVWPIPCSIGALLGHTGG 123
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|669152774|ref|XP_008611949.1| (hypothetical protein SDRG_07870 [Saprolegnia diclina VS20] >gi|530736301|gb|EQC34543.1| hypothetical protein SDRG_07870 [Saprolegnia diclina VS20]) HSP 1 Score: 68.1662 bits (165), Expect = 1.994e-10 Identity = 46/134 (34.33%), Postives = 66/134 (49.25%), Query Frame = 0 Query: 76 PNEAREQSLRFVGG----VLIAAPYFFLSAVALGAPWKEMVDRTAAWALIMGILVGGPLGAAA-----PSLQQLRLPPLWQGPPGETALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLG 200 P + + SLR G + A F + + GAP +++DRT A ++ L PL A S + L W+ + A F LG GA++GA ++PLDW P+Q+WPLP V G V GH+LG Sbjct: 61 PLLSPQASLRRAGASVAITIAAIALFHVVLIFFGAPVLDLIDRTLMLATLLAFLCVLPLTTAVGLASFDSYVETVLHQRWRSHDEQQATCTF--LGTLFGAYIGALLLPLDWDRPWQQWPLPCVYGGVYGHTLG 192
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|546679507|gb|ERL89966.1| (hypothetical protein D910_07325 [Dendroctonus ponderosae]) HSP 1 Score: 65.855 bits (159), Expect = 1.591e-9 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = 0 Query: 97 FFLSAVALGAPWKEMVDRTAAWALIMGILVGGPLGAAAPSLQQLRLPPLWQGPPGETALIRFRALG--CCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLG 200 F++ AV GAP+ +A+ M +LV P + + + + P G L F + C GAW+GA VVPLDW P+Q WP+P ++GA+AG+ G Sbjct: 93 FYIVAVLFGAPFLSKQHENLTFAITMTVLVVLPCCLYMGTDKSVVVLLSLISPAGNDQLKPFFRISQFTCLGAWLGAIVVPLDWNKPYQVWPIPAILGALAGYFFG 198
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|720071862|ref|XP_010278188.1| (PREDICTED: uncharacterized protein C1450.15-like isoform X1 [Nelumbo nucifera]) HSP 1 Score: 64.3142 bits (155), Expect = 6.631e-9 Identity = 44/128 (34.38%), Postives = 67/128 (52.34%), Query Frame = 0 Query: 99 LSAVALGAPWKEM-VDRTAAWALIMGILVGGP----LGAAAPSLQQLRLPPLWQGPPG-ETALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLG-----SFAVYCDQRWTHAKG 215 A+ LGAP + + RT W+L+M + P G++ + Q+L + P G +I A G GAW+GA+ +PLDW P+QEWP+ + GA+AG+ +G F + D+R H KG Sbjct: 104 FGAIVLGAPIGILYIKRTVNWSLLMSLFTFAPAASVFGSSWNNWQRLFA---YAKPAGIVDYMICLPAHGTVIGAWLGAWPIPLDWERPWQEWPISVSYGAIAGYIIGMVASLGFILVFDRRQKHVKG 228
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|813112559|ref|XP_012195278.1| (hypothetical protein SPRG_19082 [Saprolegnia parasitica CBS 223.65] >gi|641540470|gb|KDO34252.1| hypothetical protein SPRG_19082 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 63.5438 bits (153), Expect = 7.578e-9 Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 0 Query: 97 FFLSAVALGAPWKEMVDRTAAWALIMGILVGGPLGAAA-----PSLQQLRLPPLWQGPPGETALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLG 200 F + + GAP ++VDRT A ++ L PL A + + L W+ A F LG GA++GA ++PLDW P+Q+WPLP V GAV GH +G Sbjct: 86 FHVLLIFFGAPVLDLVDRTLMLATLLAFLCVLPLTTAVGLVSFDAYVETVLHQRWRSHDERQATCTF--LGTLFGAYIGALLLPLDWDRPWQQWPLPCVYGAVYGHLVG 192
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|720030431|ref|XP_010265511.1| (PREDICTED: uncharacterized protein C1450.15-like [Nelumbo nucifera]) HSP 1 Score: 63.929 bits (154), Expect = 9.036e-9 Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 0 Query: 99 LSAVALGAPWKEM-VDRTAAWALIMGILVGGP----LGAAAPSLQQLRLPPLWQGPPG-ETALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLG-----SFAVYCDQRWTHAKG 215 A+ LGAP + + RT +W+L+M + P G++ + Q+L + + P G +I A G GAW+GA+ +PLDW P+QEWP+ + GA+AG+ +G F D+R H KG Sbjct: 104 FGAIVLGAPIGFLYIKRTISWSLLMSLFTFAPAASVFGSSWNNWQRLFV---YAKPAGIVDYMICLPAHGTVIGAWLGAWPMPLDWERPWQEWPISVSYGAIAGYIIGMVASLGFIFMFDRRRPHVKG 228
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|661898280|emb|CDO98247.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 63.1586 bits (152), Expect = 1.288e-8 Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 0 Query: 99 LSAVALGAPWKEMVDRTAAWALIMGILVGGP----LGAAAPSLQQLRLPPLWQGPPGETALIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLG-----SFAVYCDQRWTHAKG 215 L A+ALGAP + +RT W+L+M +L P G++ Q+ GP +I A G GAW GA+ +PLDW P+Q+WP+ + GA+AG+ +G F ++ ++R H KG Sbjct: 104 LGAIALGAPMIQNFNRTLHWSLLMSMLTCVPAASVFGSSWADWHQIFAHTKPSGP--IEYMICLPAHGAVIGAWFGAWPMPLDWERPWQDWPVCVSYGALAGYFVGMAAAFGFVLFLNKR-RHVKG 226
BLAST of EWM29871.1 vs. NCBI_GenBank
Match: gi|747054209|ref|XP_011073301.1| (phosphatidylinositol-glycan biosynthesis class F protein [Sesamum indicum] >gi|1173783651|ref|XP_020547864.1| phosphatidylinositol-glycan biosynthesis class F protein [Sesamum indicum] >gi|1173783653|ref|XP_020547865.1| phosphatidylinositol-glycan biosynthesis class F protein [Sesamum indicum] >gi|1173783655|ref|XP_020547866.1| phosphatidylinositol-glycan biosynthesis class F protein [Sesamum indicum] >gi|1173783657|ref|XP_020547867.1| phosphatidylinositol-glycan biosynthesis class F protein [Sesamum indicum] >gi|1173783659|ref|XP_011073296.2| phosphatidylinositol-glycan biosynthesis class F protein [Sesamum indicum] >gi|1173783661|ref|XP_011073295.2| phosphatidylinositol-glycan biosynthesis class F protein [Sesamum indicum]) HSP 1 Score: 63.5438 bits (153), Expect = 1.299e-8 Identity = 47/125 (37.60%), Postives = 63/125 (50.40%), Query Frame = 0 Query: 99 LSAVALGAPWK-EMVDRTAAWALIMGILVGGPLGAA-APSLQQLRLPPLWQGPPGETA-LIRFRALGCCAGAWVGAFVVPLDWAMPFQEWPLPLVVGAVAGHSLG-----SFAVYCDQRWTHAKG 215 L A+ LGAP + +T W+L+M + P + S P G T +I F A G GAW GA+ +PLDW P+QEWP+ + GA+ G+ LG F VY +QR HAKG Sbjct: 134 LGAIVLGAPVGIQHFTKTIHWSLLMSVFTFVPAASVFGSSWTDWHRIFAQTKPIGSTDFMICFPAHGAVIGAWFGAWPMPLDWERPWQEWPICVTYGAIFGYLLGLVVSFGFVVYNNQR-KHAKG 257 The following BLAST results are available for this feature:
BLAST of EWM29871.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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