|
|
Properties
| Property Name | Value |
|---|
| Product | Fumarylacetoacetase |
| Orig transcript id | gnl|cribi|Naga_100035g38.3360.mrna |
| Orig protein id | gnl|cribi|Naga_100035g38.3360 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:389285..390598 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna777 ID=rna777|Name=rna777|organism=Nannochloropsis gaditana|type=mRNA|length=1959bp
TTCACAGGTTGGCAAATGTTCGCTTGATTTTGTCGAGGAATCGATTGGAG
GCGATAACCAGAAATTTGGTACAGATTTTGGCGTGATATACGGGGCCTAA
TCAACAGGAAGACGAATCCGTTTGTGGCACGTACAAATAAGCGACATCAA
GAAAGCTCGTCCGACTGAAACCAAACCACATCCATCGGTCGCGGCCTCCA
TGAGTGAAAGTGGACACATTGATCCTGTGGTCTTGGCCATGGTCATGGCG
ATCGTGACACCCATCGTGATTATGTACATGCACCAGAAACGGGCACCATC
ACGAAGCCGGCAGACGGCAAGCGCTGGTCCGCTGCCACCGTCACATCGAG
GGTTTTTGCCCTACGTAGGCGTTGCATTGACTTTTTTTAAGGACATCAAT
GCTTTCTTGGACAAAAAGCGCACAGAGCATCCCAACGACGGGCCTTTTCG
ATTTTTGGTGGCTGGGAAATGGTGGAGTGTGGTCTACGCCACCGAGGACA
TAAAATTAGTGCTAAATGGCAAGGAATCGGAGCTCTCCTTCTTGAAAGGT
TTCGAAGAGCTGATGGAGGGATTGCTCCCTAAAGCTTTCACATTCGTTCC
TCGCCATCACTTTTTCCTTCCTTTGTTTCGGGAAGGGAACATGGAATGGT
TTTGCCGCCTCCTCGCCGCTGAAGTGGAAATTCAAGTGCCGTTGCTTTTC
AGGTTACCTGCATATTCCCACGATACCTTGAAAAGGCCTGTACAGTCTCT
CTCTACTCCAAGTACGCCTGAAAATGCCTCCTCAAACCTGATCGACCTCT
TCGAGACATGCCGCCACGTCGTCATGCGCCTCAATCTTCGCGTCCTCTTG
GGTCCTCGGGTTCTGCGAGACGGGCTGTGCGAGCAGTATTACGCGGCGTT
TGACACCATTGACCCCGAGAAAGGTCTGGTGGATACAATGACAAGCCTGT
TGCTCGGCCCCCAAAAAAAAGAGGAGGCCTGGGCGACCCTGCGAGAAATA
ACACGAGAGGTACTCGAGCACTATGAGGAGAAAGAGAGCGACGCGAGGGG
CGGAGGATATACAAACGATGGAACAATGAAAGCTCAGGGAGCCCAAGAGC
AACAGGAAGCGCCCGAATGTGTCTTAGATCTGCTTGTCCGGCAGTCGAAT
GTTCCGTTGGACGTGGAGGAAGTGGCAGGCGACGTATTCGCCTTCGTCCT
GGCGGCTTTCACCAACACCTACGCCGTCTTGGCATGGTCGCTCTGGGAGC
TGGCAGGGAATCCGGAGGTCCGCGAACGTTTCCTCGCGGAATGCGGTCGA
CTACAGCAACAAAAGGAACGAGAGCAGCGCGAGCATCATCCGCGGCCCCC
ACAAAGCAGGGGGCGAGAGGAATCCTACCCGGAGGAGAAGCTTTTGGAAC
GCAATGACGAGACAGTCACCTCTTTTCTGGCGGAAGTGGACGGCTGTAAG
GTAGCCAGAGCCATCATCGAGGAGGTAATCCGCCTGCACACCCCTGGTCT
ATTTTTCCGAAAGGTGGTCGCTCCTTCCGGGATCCTCCTCTCAACCGGTC
ACCAGGTCCCTGTCGGCGACTTTCTTGCCTTCTCGGCGCGCTACATCCAC
ACATCTCCTGCCCTGCATACAAACCCGGACCGTTTCGACATTGAGCGTCA
CTTGATGGAGCGGGAAAAGAAGCGCGCGGATCTTTCGGCGTTGCAATGGG
GCGGGGGCCGACACCCCTGCTTGGGGGCTCGGTTTGCAGTGATGGAGATG
GTGATGATCATGCGAAGAGTATATCAGGGTGGCAATGTAAGAAGAGTGAC
GGAAATGATAGAGACGCACAGAGGACAGCTGGGCACCAGTGACAAGCCCG
TGCGCCCCGTGTATGTGGCCCTAGAGCGGGCCGTGTGAAAGGAGTATGTA
TAGAGCGACAGACATCACAGAGCGTTACTAAGCGGTATTGAGCAGCGTGG
GCATCCACC back to topprotein sequence of rna777 >rna777-protein ID=rna777-protein|Name=rna777|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp
MASLATSAIRASLINHGKKIIGVGKNYAMHIKEMGGQAPKAPVLFLKPTT
SYVFEGSPIRLNPKVGTVHHEVEMAVVIDKIARKISPEMALQFVGGYALA
IDLTARDVQEEAKKQGLPWTVAKGQDSFCPISNMIAKADVPDPDNVGLWL
KVNGEPRQRSNTKHMIHPTAFLVSYISHLFTLEPGDVILTGTPEGVGPIN
VGDTVTAGIEGLMQMKFDVEADT back to topmRNA from alignment at CM002456.1:389285..390598- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna777 ID=rna777|Name=rna777|organism=Nannochloropsis gaditana|type=mRNA|length=1314bp|location=Sequence derived from alignment at CM002456.1:389285..390598- (Nannochloropsis gaditana)
GTACGGCATCGTGTGGACCTCATCCCTACGCTTCTTAGGAGTTAACCTGA
GAACTTTCAACATCCTGTGTTGAAAGGGGTGTGTATTGGAAGGCATGTGT
ATGTCAATTGTGGTCATTTGTCTCCAATGAATCGATTCCCAGGTCTGGAA
GAAGCGCCTGCTTCCTACAACCCTCCTCAATCCTTATGACCTTTTTGGCG
TTCATTTCACGGTCCTTCTGTCCCCTAATACATGTATATAACTGGAAACA
CCAACGCTCATGCACACACACCTGCATGGATGCACACAGAATCCAGCGAC
CAGTCCATTAGTACACGGAGTACACTTGAACCTACGCACGCTACCACACC
CTTACGTTCCGTCCCATGGCCTCACTAGCCACCTCTGCGATTCGGGCGTC
CCTTATCAATCATGGGAAAAAGATAATTGGCGTGGGGAAAAACTATGCCA
TGCACATCAAGGAAATGGGTGGACAAGCACCCAAAGCCCCGGTTCTTTTC
CTAAAGCCAACCACAAGCTATGTCTTCGAAGGCAGCCCTATCAGACTCAA
TCCCAAGGTCGGGACCGTCCATCATGAAGTAGAGATGGCCGTGGTTATAG
ACAAGATAGCAAGGAAAATTTCACCCGAGATGGCTCTTCAGTTTGTGGGA
GGCTACGCTTTGGCCATTGACTTGACTGCGCGTGACGTCCAAGAGGAGGC
CAAAAAACAAGGCTTGCCATGGACTGTCGCAAAAGGACAAGATTCCTTTT
GCCCCATTTCTAACATGATCGCGAAAGCGGACGTTCCCGACCCTGATAAT
GTTGGTCTATGGCTGAAAGTGAACGGGGAGCCAAGACAGCGGTCCAACAC
GAAGCACATGATCCATCCGACAGCGTTTCTGGTCAGCTACATTTCTCACC
TCTTTACGCTTGAACCGGGGGACGTTATCCTGACAGGAACACCGGAGGGT
GTAGGACCCATCAATGTGGGGGATACAGTGACAGCAGGGATCGAGGGATT
GATGCAAATGAAGTTTGATGTCGAAGCAGATACTTAGGGGAGGAGCGAGC
GAGGGGTAACCCTTGCGGAGGGAGAATGGAGGCCGCCCGAGGGCCTCCTG
TATAGAACACTTGGTACATTACTCAAGACATATAAAGTGCCAGTCAAAGA
AAACCTGTAGCACCCATAGGCATGCCGCAGGGTCGATGCTTGTGGGCATG
TGGAAACTGAGGGAAGGGGCAAGAAAAAGAGGGAGTGGCTGGCGAGTTCC
TATGGTGGATGCCCACGCTGCTCAATACCGCTTAGTAACGCTCTGTGATG
TCTGTCGCTCTATA back to topCoding sequence (CDS) from alignment at CM002456.1:389285..390598- >rna777 ID=rna777|Name=rna777|organism=Nannochloropsis gaditana|type=CDS|length=672bp|location=Sequence derived from alignment at CM002456.1:389285..390598- (Nannochloropsis gaditana)
ATGGCCTCACTAGCCACCTCTGCGATTCGGGCGTCCCTTATCAATCATGG
GAAAAAGATAATTGGCGTGGGGAAAAACTATGCCATGCACATCAAGGAAA
TGGGTGGACAAGCACCCAAAGCCCCGGTTCTTTTCCTAAAGCCAACCACA
AGCTATGTCTTCGAAGGCAGCCCTATCAGACTCAATCCCAAGGTCGGGAC
CGTCCATCATGAAGTAGAGATGGCCGTGGTTATAGACAAGATAGCAAGGA
AAATTTCACCCGAGATGGCTCTTCAGTTTGTGGGAGGCTACGCTTTGGCC
ATTGACTTGACTGCGCGTGACGTCCAAGAGGAGGCCAAAAAACAAGGCTT
GCCATGGACTGTCGCAAAAGGACAAGATTCCTTTTGCCCCATTTCTAACA
TGATCGCGAAAGCGGACGTTCCCGACCCTGATAATGTTGGTCTATGGCTG
AAAGTGAACGGGGAGCCAAGACAGCGGTCCAACACGAAGCACATGATCCA
TCCGACAGCGTTTCTGGTCAGCTACATTTCTCACCTCTTTACGCTTGAAC
CGGGGGACGTTATCCTGACAGGAACACCGGAGGGTGTAGGACCCATCAAT
GTGGGGGATACAGTGACAGCAGGGATCGAGGGATTGATGCAAATGAAGTT
TGATGTCGAAGCAGATACTTAG back to top
|