EWM29890.1, cds749 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|585112473|gb|EWM29890.1| (hypothetical protein Naga_100035g6 [Nannochloropsis gaditana]) HSP 1 Score: 558.91 bits (1439), Expect = 0.000e+0 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0 Query: 1 MPYINFASVLRHSFAHFSLTNISTTLRRKMNGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSPPPAYESLTGPGGGGMEMGGEWKAEVQVLPTNKRRPRQNGERRRSRF 271 MPYINFASVLRHSFAHFSLTNISTTLRRKMNGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSPPPAYESLTGPGGGGMEMGGEWKAEVQVLPTNKRRPRQNGERRRSRF Sbjct: 1 MPYINFASVLRHSFAHFSLTNISTTLRRKMNGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSPPPAYESLTGPGGGGMEMGGEWKAEVQVLPTNKRRPRQNGERRRSRF 271
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|695443427|ref|XP_009533699.1| (hypothetical protein PHYSODRAFT_352404, partial [Phytophthora sojae] >gi|348671133|gb|EGZ10954.1| hypothetical protein PHYSODRAFT_352404, partial [Phytophthora sojae]) HSP 1 Score: 139.428 bits (350), Expect = 4.469e-36 Identity = 79/187 (42.25%), Postives = 104/187 (55.61%), Query Frame = 0 Query: 31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQP 217 N +LD ++ ++CY +RVR DV + Q+ +L P F HN+GT S LL L GT+ I Y+ QYNIPVE ++ E YP APP C+VRPT +M +K GH HV DG + +PY +W + EL A M S+FG PPV+ RR G + A S T Y Q GS + S PQP Sbjct: 4 NNVSNLDQILSSLQCYPQSSRVRGDVYNLLGQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGSQYNIPVEFWVVETYPLAPPVCFVRPTADMMVKPGHPHVTSDGYVKIPYTSDWRP-DFTLLELVAHMCSIFGNMPPVF--RRPANASGRPAARANGSSGTGGY-FQQGSYAQ---SHPPQP 183
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|1173951237|gb|OQR99144.1| (hypothetical protein ACHHYP_07257 [Achlya hypogyna]) HSP 1 Score: 141.354 bits (355), Expect = 5.014e-36 Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 0 Query: 34 VDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY 174 V L+ +M +R Y + RVR DV + Q+ +L P+ + HNNGT S +L LSGT+ I Y QYNIPVE+++ E YP A P CYVRPT +M I+ GH HVD++GLI LPY W++ H++ EL SVFG PPVY Sbjct: 7 VTLERIMGSLRSYTDATRVRQDVETLLRQIPSLSPQSGVYTHNNGTTSTMLSLSGTIPIYYNGNQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIRPGHPHVDQNGLILLPYSTHWDS-DHSLVELIGYQCSVFGTQPPVY 146
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|669158834|ref|XP_008614979.1| (hypothetical protein SDRG_10750 [Saprolegnia diclina VS20] >gi|530733338|gb|EQC31580.1| hypothetical protein SDRG_10750 [Saprolegnia diclina VS20]) HSP 1 Score: 140.969 bits (354), Expect = 6.414e-36 Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 0 Query: 34 VDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY 174 V L+ +M +R Y + RVR DV + Q+ +L P+ + HNNGT S +L LSGT+ I Y QYNIPVE+++ E YP A P CYVRPT +M I+ GH HVD++GLI LPY W++ H++ EL SVFG PPVY Sbjct: 9 VALERIMGSLRSYTDATRVRQDVETLLRQIPSLAPQSGVYTHNNGTTSTMLSLSGTIPIYYNGNQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIRPGHPHVDQNGLILLPYSTHWDS-DHSLVELIGYQCSVFGTQPPVY 148
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|813177974|ref|XP_012205456.1| (hypothetical protein SPRG_11255 [Saprolegnia parasitica CBS 223.65] >gi|641529662|gb|KDO23823.1| hypothetical protein SPRG_11255 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 140.969 bits (354), Expect = 7.134e-36 Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 0 Query: 34 VDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY 174 V L+ +M +R Y + RVR DV + Q+ +L P+ + HNNGT S +L LSGT+ I Y QYNIPVE+++ E YP A P CYVRPT +M I+ GH HVD++GLI LPY W++ H++ EL SVFG PPVY Sbjct: 7 VALERIMGSLRSYTDATRVRQDVETLLRQIPSLAPQSGVYTHNNGTTSTMLSLSGTIPIYYNGSQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIRPGHPHVDQNGLILLPYSTHWDS-DHSLVELIGYQCSVFGTQPPVY 146
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|566008336|gb|ETI31247.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|566008337|gb|ETI31248.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569] >gi|567945850|gb|ETK71661.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567945851|gb|ETK71662.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|567974491|gb|ETL25083.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567974492|gb|ETL25084.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568003976|gb|ETL78313.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568003977|gb|ETL78314.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568033882|gb|ETM31574.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568033883|gb|ETM31575.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|570312031|gb|ETO59979.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570312032|gb|ETO59980.1| hypothetical protein, variant 3 [Phytophthora parasitica P1976] >gi|570935821|gb|ETP01078.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570935822|gb|ETP01079.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >gi|570966104|gb|ETP29223.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|570966105|gb|ETP29224.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297]) HSP 1 Score: 136.346 bits (342), Expect = 2.286e-34 Identity = 78/198 (39.39%), Postives = 106/198 (53.54%), Query Frame = 0 Query: 31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY---AVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSP 225 N +LD ++ ++CY +RVR DV + Q+ +L P F HN+GT S LL L GT+ I Y+ QYNIPVE ++ E YP +PP C+VRPT +M +K GH HV DG + +PY +W + EL A M S+FG PPV+ A R GS S A + G +Q + Q PP +PSP Sbjct: 4 NNVSNLDQILSSLQCYPQSSRVRGDVYNLLGQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGNQYNIPVEFWVVEAYPMSPPVCFVRPTADMMVKPGHPHVTSDGYVKIPYTSDWRP-DFTMLELVAHMCSIFGNMPPVFRRPASSRPQNRANGSASAATSG---------TGGYFQQGSYAQSHPP---QPSP 188
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|675179463|ref|XP_008898616.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|675179465|ref|XP_008898617.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|568101586|gb|ETN16272.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|568101587|gb|ETN16273.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310]) HSP 1 Score: 136.346 bits (342), Expect = 2.359e-34 Identity = 78/198 (39.39%), Postives = 106/198 (53.54%), Query Frame = 0 Query: 31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY---AVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSP 225 N +LD ++ ++CY +RVR DV + Q+ +L P F HN+GT S LL L GT+ I Y+ QYNIPVE ++ E YP +PP C+VRPT +M +K GH HV DG + +PY +W + EL A M S+FG PPV+ A R GS S A + G +Q + Q PP +PSP Sbjct: 4 NNVSNLDQILSSLQCYPQSSRVRGDVYNLLGQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGNQYNIPVEFWVVEAYPMSPPVCFVRPTADMMVKPGHPHVTSDGYVKIPYTSDWRP-DFTMLELVAHMCSIFGNMPPVFRRPASSRPQNRANGSASAATSG---------TGGYFQQGSYAQSHPP---QPSP 188
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|673026686|ref|XP_008867304.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574477351|gb|ETW04348.1| hypothetical protein, variant 2 [Aphanomyces invadans]) HSP 1 Score: 135.576 bits (340), Expect = 2.393e-34 Identity = 79/202 (39.11%), Postives = 110/202 (54.46%), Query Frame = 0 Query: 31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPG------QMGSLGRQPTSQQP---QPPLQARP 223 N LD +M +R Y + +RVR DV + Q+ ++ P+ + HNNG+ S ++ L+GT+ I Y QYNIPVE++I E YP A P C+VRPT +M I+ GH HVD++GLI +PY W+ H++ EL S+FG PPV+ RR ++PAP S+ G Q G QQ QPP Q P Sbjct: 4 NSLATLDRIMGSLRSYTDPSRVRYDVETLLRQIPSISPQHGVYTHNNGSTSTMMSLTGTIPIYYGGNQYNIPVEIWIPEAYPFAAPTCFVRPTTDMMIRPGHPHVDQNGLIVVPYSTNWDC-DHSLVELVGYHCSIFGAQPPVF--RR---PANQQLAPAPTYQQPSMQQGYTQQPYQQGGYAASSQQQQAPYSQPPAQTYP 199
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|673026684|ref|XP_008867303.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574477350|gb|ETW04347.1| hypothetical protein, variant 1 [Aphanomyces invadans]) HSP 1 Score: 135.576 bits (340), Expect = 2.672e-34 Identity = 79/202 (39.11%), Postives = 110/202 (54.46%), Query Frame = 0 Query: 31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPG------QMGSLGRQPTSQQP---QPPLQARP 223 N LD +M +R Y + +RVR DV + Q+ ++ P+ + HNNG+ S ++ L+GT+ I Y QYNIPVE++I E YP A P C+VRPT +M I+ GH HVD++GLI +PY W+ H++ EL S+FG PPV+ RR ++PAP S+ G Q G QQ QPP Q P Sbjct: 4 NSLATLDRIMGSLRSYTDPSRVRYDVETLLRQIPSISPQHGVYTHNNGSTSTMMSLTGTIPIYYGGNQYNIPVEIWIPEAYPFAAPTCFVRPTTDMMIRPGHPHVDQNGLIVVPYSTNWDC-DHSLVELVGYHCSIFGAQPPVF--RR---PANQQLAPAPTYQQPSMQQGYTQQPYQQGGYAASSQQQQAPYSQPPAQTYP 199
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|1173942539|gb|OQR91519.1| (dual specificity protein phosphatase, partial [Thraustotheca clavata]) HSP 1 Score: 140.584 bits (353), Expect = 4.709e-34 Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 0 Query: 36 LDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY 174 L+ +M +R Y + RVR DV + Q+ +L P+ + HNNGT S +L L+GT+ I Y QYNIPVE+++ E YP A P CYVRPT +M IK GH HVD++GLI LPY W++ H++ EL SVFG PPVY Sbjct: 10 LERIMGSLRSYTDATRVRQDVETLLRQIPSLAPQSGVYTHNNGTTSTMLSLTGTIPIYYNGNQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIKSGHPHVDQNGLIMLPYSTHWDS-DHSLAELIGYQCSVFGTQPPVY 147 The following BLAST results are available for this feature:
BLAST of EWM29890.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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