EWM29890.1, cds749 (CDS) Nannochloropsis gaditana

Overview
NameEWM29890.1
Unique Namecds749
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:331870..332055 +
Alignment locationCM002456.1:332247..332399 +
Alignment locationCM002456.1:332574..333050 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29890.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100035g6.3354.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:331870..332055 +
CM002456.1supercontigCM002456.1:332247..332399 +
CM002456.1supercontigCM002456.1:332574..333050 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0006464cellular protein modification process
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR008883UEV_N
Homology
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|585112473|gb|EWM29890.1| (hypothetical protein Naga_100035g6 [Nannochloropsis gaditana])

HSP 1 Score: 558.91 bits (1439), Expect = 0.000e+0
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
Query:    1 MPYINFASVLRHSFAHFSLTNISTTLRRKMNGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSPPPAYESLTGPGGGGMEMGGEWKAEVQVLPTNKRRPRQNGERRRSRF 271
            MPYINFASVLRHSFAHFSLTNISTTLRRKMNGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSPPPAYESLTGPGGGGMEMGGEWKAEVQVLPTNKRRPRQNGERRRSRF
Sbjct:    1 MPYINFASVLRHSFAHFSLTNISTTLRRKMNGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSPPPAYESLTGPGGGGMEMGGEWKAEVQVLPTNKRRPRQNGERRRSRF 271          
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|695443427|ref|XP_009533699.1| (hypothetical protein PHYSODRAFT_352404, partial [Phytophthora sojae] >gi|348671133|gb|EGZ10954.1| hypothetical protein PHYSODRAFT_352404, partial [Phytophthora sojae])

HSP 1 Score: 139.428 bits (350), Expect = 4.469e-36
Identity = 79/187 (42.25%), Postives = 104/187 (55.61%), Query Frame = 0
Query:   31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQP 217
            N   +LD ++  ++CY   +RVR DV   + Q+ +L P    F HN+GT S LL L GT+ I Y+  QYNIPVE ++ E YP APP C+VRPT +M +K GH HV  DG + +PY  +W      + EL A M S+FG  PPV+  RR     G   + A  S  T  Y  Q GS  +   S  PQP
Sbjct:    4 NNVSNLDQILSSLQCYPQSSRVRGDVYNLLGQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGSQYNIPVEFWVVETYPLAPPVCFVRPTADMMVKPGHPHVTSDGYVKIPYTSDWRP-DFTLLELVAHMCSIFGNMPPVF--RRPANASGRPAARANGSSGTGGY-FQQGSYAQ---SHPPQP 183          
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|1173951237|gb|OQR99144.1| (hypothetical protein ACHHYP_07257 [Achlya hypogyna])

HSP 1 Score: 141.354 bits (355), Expect = 5.014e-36
Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 0
Query:   34 VDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY 174
            V L+ +M  +R Y +  RVR DV   + Q+ +L P+   + HNNGT S +L LSGT+ I Y   QYNIPVE+++ E YP A P CYVRPT +M I+ GH HVD++GLI LPY   W++  H++ EL     SVFG  PPVY
Sbjct:    7 VTLERIMGSLRSYTDATRVRQDVETLLRQIPSLSPQSGVYTHNNGTTSTMLSLSGTIPIYYNGNQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIRPGHPHVDQNGLILLPYSTHWDS-DHSLVELIGYQCSVFGTQPPVY 146          
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|669158834|ref|XP_008614979.1| (hypothetical protein SDRG_10750 [Saprolegnia diclina VS20] >gi|530733338|gb|EQC31580.1| hypothetical protein SDRG_10750 [Saprolegnia diclina VS20])

HSP 1 Score: 140.969 bits (354), Expect = 6.414e-36
Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 0
Query:   34 VDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY 174
            V L+ +M  +R Y +  RVR DV   + Q+ +L P+   + HNNGT S +L LSGT+ I Y   QYNIPVE+++ E YP A P CYVRPT +M I+ GH HVD++GLI LPY   W++  H++ EL     SVFG  PPVY
Sbjct:    9 VALERIMGSLRSYTDATRVRQDVETLLRQIPSLAPQSGVYTHNNGTTSTMLSLSGTIPIYYNGNQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIRPGHPHVDQNGLILLPYSTHWDS-DHSLVELIGYQCSVFGTQPPVY 148          
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|813177974|ref|XP_012205456.1| (hypothetical protein SPRG_11255 [Saprolegnia parasitica CBS 223.65] >gi|641529662|gb|KDO23823.1| hypothetical protein SPRG_11255 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 140.969 bits (354), Expect = 7.134e-36
Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 0
Query:   34 VDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY 174
            V L+ +M  +R Y +  RVR DV   + Q+ +L P+   + HNNGT S +L LSGT+ I Y   QYNIPVE+++ E YP A P CYVRPT +M I+ GH HVD++GLI LPY   W++  H++ EL     SVFG  PPVY
Sbjct:    7 VALERIMGSLRSYTDATRVRQDVETLLRQIPSLAPQSGVYTHNNGTTSTMLSLSGTIPIYYNGSQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIRPGHPHVDQNGLILLPYSTHWDS-DHSLVELIGYQCSVFGTQPPVY 146          
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|566008336|gb|ETI31247.1| (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|566008337|gb|ETI31248.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569] >gi|567945850|gb|ETK71661.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567945851|gb|ETK71662.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|567974491|gb|ETL25083.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567974492|gb|ETL25084.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568003976|gb|ETL78313.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568003977|gb|ETL78314.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568033882|gb|ETM31574.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568033883|gb|ETM31575.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|570312031|gb|ETO59979.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570312032|gb|ETO59980.1| hypothetical protein, variant 3 [Phytophthora parasitica P1976] >gi|570935821|gb|ETP01078.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570935822|gb|ETP01079.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >gi|570966104|gb|ETP29223.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|570966105|gb|ETP29224.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297])

HSP 1 Score: 136.346 bits (342), Expect = 2.286e-34
Identity = 78/198 (39.39%), Postives = 106/198 (53.54%), Query Frame = 0
Query:   31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY---AVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSP 225
            N   +LD ++  ++CY   +RVR DV   + Q+ +L P    F HN+GT S LL L GT+ I Y+  QYNIPVE ++ E YP +PP C+VRPT +M +K GH HV  DG + +PY  +W      + EL A M S+FG  PPV+   A  R      GS S A +           G   +Q +  Q  PP   +PSP
Sbjct:    4 NNVSNLDQILSSLQCYPQSSRVRGDVYNLLGQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGNQYNIPVEFWVVEAYPMSPPVCFVRPTADMMVKPGHPHVTSDGYVKIPYTSDWRP-DFTMLELVAHMCSIFGNMPPVFRRPASSRPQNRANGSASAATSG---------TGGYFQQGSYAQSHPP---QPSP 188          
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|675179463|ref|XP_008898616.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|675179465|ref|XP_008898617.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|568101586|gb|ETN16272.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|568101587|gb|ETN16273.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310])

HSP 1 Score: 136.346 bits (342), Expect = 2.359e-34
Identity = 78/198 (39.39%), Postives = 106/198 (53.54%), Query Frame = 0
Query:   31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY---AVRRGGGGGGGSVSPAPASFSTSLYPGQMGSLGRQPTSQQPQPPLQARPSP 225
            N   +LD ++  ++CY   +RVR DV   + Q+ +L P    F HN+GT S LL L GT+ I Y+  QYNIPVE ++ E YP +PP C+VRPT +M +K GH HV  DG + +PY  +W      + EL A M S+FG  PPV+   A  R      GS S A +           G   +Q +  Q  PP   +PSP
Sbjct:    4 NNVSNLDQILSSLQCYPQSSRVRGDVYNLLGQIPSLQPNCGTFAHNDGTTSTLLNLEGTIPIFYRGNQYNIPVEFWVVEAYPMSPPVCFVRPTADMMVKPGHPHVTSDGYVKIPYTSDWRP-DFTMLELVAHMCSIFGNMPPVFRRPASSRPQNRANGSASAATSG---------TGGYFQQGSYAQSHPP---QPSP 188          
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|673026686|ref|XP_008867304.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574477351|gb|ETW04348.1| hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 135.576 bits (340), Expect = 2.393e-34
Identity = 79/202 (39.11%), Postives = 110/202 (54.46%), Query Frame = 0
Query:   31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPG------QMGSLGRQPTSQQP---QPPLQARP 223
            N    LD +M  +R Y + +RVR DV   + Q+ ++ P+   + HNNG+ S ++ L+GT+ I Y   QYNIPVE++I E YP A P C+VRPT +M I+ GH HVD++GLI +PY   W+   H++ EL     S+FG  PPV+  RR        ++PAP     S+  G      Q G        QQ    QPP Q  P
Sbjct:    4 NSLATLDRIMGSLRSYTDPSRVRYDVETLLRQIPSISPQHGVYTHNNGSTSTMMSLTGTIPIYYGGNQYNIPVEIWIPEAYPFAAPTCFVRPTTDMMIRPGHPHVDQNGLIVVPYSTNWDC-DHSLVELVGYHCSIFGAQPPVF--RR---PANQQLAPAPTYQQPSMQQGYTQQPYQQGGYAASSQQQQAPYSQPPAQTYP 199          
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|673026684|ref|XP_008867303.1| (hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574477350|gb|ETW04347.1| hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 135.576 bits (340), Expect = 2.672e-34
Identity = 79/202 (39.11%), Postives = 110/202 (54.46%), Query Frame = 0
Query:   31 NGRVDLDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVYAVRRGGGGGGGSVSPAPASFSTSLYPG------QMGSLGRQPTSQQP---QPPLQARP 223
            N    LD +M  +R Y + +RVR DV   + Q+ ++ P+   + HNNG+ S ++ L+GT+ I Y   QYNIPVE++I E YP A P C+VRPT +M I+ GH HVD++GLI +PY   W+   H++ EL     S+FG  PPV+  RR        ++PAP     S+  G      Q G        QQ    QPP Q  P
Sbjct:    4 NSLATLDRIMGSLRSYTDPSRVRYDVETLLRQIPSISPQHGVYTHNNGSTSTMMSLTGTIPIYYGGNQYNIPVEIWIPEAYPFAAPTCFVRPTTDMMIRPGHPHVDQNGLIVVPYSTNWDC-DHSLVELVGYHCSIFGAQPPVF--RR---PANQQLAPAPTYQQPSMQQGYTQQPYQQGGYAASSQQQQAPYSQPPAQTYP 199          
BLAST of EWM29890.1 vs. NCBI_GenBank
Match: gi|1173942539|gb|OQR91519.1| (dual specificity protein phosphatase, partial [Thraustotheca clavata])

HSP 1 Score: 140.584 bits (353), Expect = 4.709e-34
Identity = 68/139 (48.92%), Postives = 90/139 (64.75%), Query Frame = 0
Query:   36 LDSLMRQVRCYRNVARVRADVIACIAQVRTLIPKVEKFIHNNGTESELLVLSGTVAINYQSRQYNIPVEVYISEPYPEAPPRCYVRPTKEMDIKVGHRHVDRDGLIYLPYLHEWNARSHNVTELCAAMSSVFGLDPPVY 174
            L+ +M  +R Y +  RVR DV   + Q+ +L P+   + HNNGT S +L L+GT+ I Y   QYNIPVE+++ E YP A P CYVRPT +M IK GH HVD++GLI LPY   W++  H++ EL     SVFG  PPVY
Sbjct:   10 LERIMGSLRSYTDATRVRQDVETLLRQIPSLAPQSGVYTHNNGTTSTMLSLTGTIPIYYNGNQYNIPVEIWMPEAYPFAAPTCYVRPTADMMIKSGHPHVDQNGLIMLPYSTHWDS-DHSLAELIGYQCSVFGTQPPVY 147          
The following BLAST results are available for this feature:
BLAST of EWM29890.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112473|gb|EWM29890.1|0.000e+0100.00hypothetical protein Naga_100035g6 [Nannochloropsi... [more]
gi|695443427|ref|XP_009533699.1|4.469e-3642.25hypothetical protein PHYSODRAFT_352404, partial [P... [more]
gi|1173951237|gb|OQR99144.1|5.014e-3648.94hypothetical protein ACHHYP_07257 [Achlya hypogyna... [more]
gi|669158834|ref|XP_008614979.1|6.414e-3648.94hypothetical protein SDRG_10750 [Saprolegnia dicli... [more]
gi|813177974|ref|XP_012205456.1|7.134e-3648.94hypothetical protein SPRG_11255 [Saprolegnia paras... [more]
gi|566008336|gb|ETI31247.1|2.286e-3439.39hypothetical protein, variant 2 [Phytophthora para... [more]
gi|675179463|ref|XP_008898616.1|2.359e-3439.39hypothetical protein, variant 2 [Phytophthora para... [more]
gi|673026686|ref|XP_008867304.1|2.393e-3439.11hypothetical protein, variant 2 [Aphanomyces invad... [more]
gi|673026684|ref|XP_008867303.1|2.672e-3439.11hypothetical protein, variant 1 [Aphanomyces invad... [more]
gi|1173942539|gb|OQR91519.1|4.709e-3448.92dual specificity protein phosphatase, partial [Thr... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna749rna749Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications