EWM29930.1, cds742 (CDS) Nannochloropsis gaditana

Overview
NameEWM29930.1
Unique Namecds742
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:305140..305853 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29930.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100661g1.3411.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:305140..305853 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM29930.1 vs. NCBI_GenBank
Match: gi|585112515|gb|EWM29930.1| (hypothetical protein Naga_100661g1 [Nannochloropsis gaditana])

HSP 1 Score: 462.996 bits (1190), Expect = 1.420e-164
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0 
Query:    1 MDSVGAAAAAAINDKKASMPEEEEGKRLGRTILDMLRQPSAHASLAASVASSSCTLQPPLVPSGSEEAGREDKGAGGVRWETRSLPEIEEQARSRWAAVALALEEGSILLEDGSRVPVIRLPLGEDSPSTPCPSPPIACRSAPSIGLVDAREVFTTSSSEEEGREGSWVESVQRWRRGGTFFGRDRQDGCRGGRGGKKRGGRGWKGGRWKEEGKGQSEEGKGRDRQGNGTQSIACRA 237
            MDSVGAAAAAAINDKKASMPEEEEGKRLGRTILDMLRQPSAHASLAASVASSSCTLQPPLVPSGSEEAGREDKGAGGVRWETRSLPEIEEQARSRWAAVALALEEGSILLEDGSRVPVIRLPLGEDSPSTPCPSPPIACRSAPSIGLVDAREVFTTSSSEEEGREGSWVESVQRWRRGGTFFGRDRQDGCRGGRGGKKRGGRGWKGGRWKEEGKGQSEEGKGRDRQGNGTQSIACRA
Sbjct:    1 MDSVGAAAAAAINDKKASMPEEEEGKRLGRTILDMLRQPSAHASLAASVASSSCTLQPPLVPSGSEEAGREDKGAGGVRWETRSLPEIEEQARSRWAAVALALEEGSILLEDGSRVPVIRLPLGEDSPSTPCPSPPIACRSAPSIGLVDAREVFTTSSSEEEGREGSWVESVQRWRRGGTFFGRDRQDGCRGGRGGKKRGGRGWKGGRWKEEGKGQSEEGKGRDRQGNGTQSIACRA 237
The following BLAST results are available for this feature:
BLAST of EWM29930.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112515|gb|EWM29930.1|1.420e-164100.00hypothetical protein Naga_100661g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna742rna742Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications