rna718, rna718 (mRNA) Nannochloropsis gaditana

Overview
Namerna718
Unique Namerna718
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length986
Alignment locationCM002456.1:253001..254217 -

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Properties
Property NameValue
Productformin like protein
Orig transcript idgnl|cribi|Naga_101982g1.5779.mrna
Orig protein idgnl|cribi|Naga_101982g1.5779
GeneFOL2
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:253001..254217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FOL2gene689Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna718rna718-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29955.1cds718Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna718 ID=rna718|Name=rna718|organism=Nannochloropsis gaditana|type=mRNA|length=986bp
AGGGAGGAGGGGAGTCCAAGCTGGCCCGGAGCAGCGGACGCCGCCGGAGC
ATTGGGAAAACCTCGACCGTCGTCGCACTCTCACACGTCGACCGCTCTCA
TGGCGCCGTGTCTTTTTTTCCCCCCCGGCGTTCCTATCTCCTCTGCGGAA
CAGGACGTTTTGAAATACTTCGGAGAGGATCCTAAGATGACTCCTCAAGC
CTTCTTCACCACGCTTGAGAGCTTCATGCGGGTCTTTGAGCAGGCCAAGG
ACGATCTGGAGCGGAAAGAACGCGCGAAAGAGCGGGAACGCCTCTTGGCG
GAGAAGAAAGCCCTGGCGTCACCGCTGAATACCAGCTTGAATGGTAGCAA
CACTCGGAAGAAGAGCGCGAGCGCAGGGGTGGCCAAGGAGGAGGAAGGAG
GAGATTCGACGGGTGGCGGGCAAAGTGTGGCCCCGATGGCCCCACAGGAT
GGGGGTGGAAAGGGAAAGGCAGGGGGTACCGTGGGTGGGGAGGGAGATCC
AGCGCGGAGGCGACAGGCCTCGGCAGGCATGAGCTTAGGAGGGGAGGAGG
GAGGGAAGGAAAGCAAATTCGCTCGATCCCTGACCTGGGAAACCCCGGGC
TCGGTGGACGTGAGAGGGAGGGGGGAGAGCACGGAGGGAGGGGGGGAGGG
GGGGGAAGACGGGCCGCGATCGCCGAACAAACCTCCCAAGCCAGCGGTCC
GAAAAGCGGGATCGGTGCCTGACGCGTTCCCTTTGTGAAGAGGGAGGGCG
AGAGGAAGGGAGGGAGGAAGCGAGGCGATGGAGGGAGCGTGGGATGTCTC
CGACGGAGAAAGGAATAGGGGGTCCCGGCGGCGTGAATGAGTGAAGAAGG
GCGAGCGTGAGTGGAGGGCAAGGGGTCCATGAATATAAGGAAGAGTTTTC
GAGGCACGCAGGCACGGGAAAGCCAACCCGGAAGTACACATGAAGCATCT
GGCACAGCCCAAAATAAAGACACCAACGTGCAATGG
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protein sequence of rna718

>rna718-protein ID=rna718-protein|Name=rna718|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MGITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRP
ASKILLELVLAEIRELEAGWNILERVAQKMPPPSLPSSRSATPSPPPPPS
SSTFTTPPRYRAASSMAVPISRMDSEGEGGRQRASSLDAPGVPAKPIGGS
GSRRDAGEEGKRGGKEKGNSPFRKTLENLFNRKSPPRSEGGAEGGAEGGS
EGRKGKTPSPPRDQSGLRPGRTPTK
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mRNA from alignment at CM002456.1:253001..254217-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna718 ID=rna718|Name=rna718|organism=Nannochloropsis gaditana|type=mRNA|length=1217bp|location=Sequence derived from alignment at CM002456.1:253001..254217- (Nannochloropsis gaditana)
ATGCCTTCCGTGTGGATGAAATGAGATTCCAGGTATGTCCTCGCTTGTCT
TGTCACCCATACTTCTCGTTCGCTCCCGCCCTCCCTCGTTCCCTCCCCCC
CTCCCCAGACGATTGAGACGGCCTGCAACGACGTGAAAAGCTCGGTGAGA
CTGCGGCAAATGCTGAAATGCGTCCTCTCTGTGGGTAACCGCGTCAACCG
CGCGGACCACAGCGACCATGTAAGGAGGCCAGGACAAGGGGGGGGGAGGT
AGCGGGGGCATCACGGTTCACCCACTTCCATTCCGTTTCCTTCCAGGCGA
TGGGGATCACTTTGGACTCTCTCCTCAAGCTCCCGGAGGCCAAAGCCCAC
GACCGCAAAACCTCCATCCTCCATGGGCTGATCCAGGTGCGGTGCTACCC
TCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCCTTCCCTC
GTCCCCTGCCGGCCTCACGTCGTCTGTTTCCCCTTCCAGGTGATCAAGAA
GAACGAGCCCGACGTGTTGGCATTCACGGAGGATCTCCAATCCGTCCGAC
CCGCCTCCAAGATCCTGTTGGAGGTGCGCGTCCCTCCCTTCGTTCTTTCC
CTCCCTTCCATCGCCTGCACCTGACTCGGCGCCTCTCCTCTCGTTCACCC
GTTTTCTCAATGCCTCTTGCCCCTCTCGGCGCACCCTTCCCTTCCTCTCT
TTGTCCACAGCTGGTGCTCGCCGAAATTCGGGAACTGGAAGCAGGGTGGA
ACATACTTGAGAGGGTCGCCCAAAAGATGCCCCCGCCCTCCCTCCCGTCC
TCCCGCAGCGCCACACCGTCACCCCCACCCCCTCCCTCGTCCTCCACCTT
CACAACTCCTCCTCGTTACCGAGCGGCGTCTTCCATGGCCGTGCCCATCT
CCCGCATGGACTCGGAGGGGGAGGGTGGGAGGCAGCGTGCCTCTTCCCTG
GATGCTCCTGGGGTGCCGGCGAAGCCAATTGGCGGGTCCGGGTCGCGGAG
GGACGCAGGGGAAGAGGGAAAAAGAGGAGGGAAAGAAAAGGGCAACAGCC
CGTTTCGGAAGACGCTGGAGAACCTCTTCAACCGCAAGAGTCCCCCACGG
TCGGAGGGAGGGGCGGAGGGAGGGGCGGAGGGAGGGTCGGAGGGAAGGAA
AGGGAAGACGCCCTCGCCTCCAAGGGACCAAAGTGGGCTGCGGCCCGGAC
GGACTCCGACAAAGTGA
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Coding sequence (CDS) from alignment at CM002456.1:253001..254217-

>rna718 ID=rna718|Name=rna718|organism=Nannochloropsis gaditana|type=CDS|length=2034bp|location=Sequence derived from alignment at CM002456.1:253001..254217- (Nannochloropsis gaditana)
CTGGTGCTCGCCGAAATTCGGGAACTGGAAGCAGGGTGGAACATACTTGA
GAGGGTCGCCCAAAAGATGCCCCCGCCCTCCCTCCCGTCCTCCCGCAGCG
CCACACCGTCACCCCCACCCCCTCCCTCGTCCTCCACCTTCACAACTCCT
CCTCGTTACCGAGCGGCGTCTTCCATGGCCGTGCCCATCTCCCGCATGGA
CTCGGAGGGGGAGGGTGGGAGGCAGCGTGCCTCTTCCCTGGATGCTCCTG
GGGTGCCGGCGAAGCCAATTGGCGGGTCCGGGTCGCGGAGGGACGCAGGG
GAAGAGGGAAAAAGAGGAGGGAAAGAAAAGGGCAACAGCCCGTTTCGGAA
GACGCTGGAGAACCTCTTCAACCGCAAGAGTCCCCCACGGTCGGAGGGAG
GGGCGGAGGGAGGGGCGGAGGGAGGGTCGGAGGGAAGGAAAGGGAAGACG
CCCTCGCCTCCAAGGGACCAAAGTGGGCTGCGGCCCGGACGGACTCCGAC
AAAGTGAGTGATCAAGAAGAACGAGCCCGACGTGTTGGCATTCACGGAGG
ATCTCCAATCCGTCCGACCCGCCTCCAAGATCCTGTTGGAGATGGGGATC
ACTTTGGACTCTCTCCTCAAGCTCCCGGAGGCCAAAGCCCACGACCGCAA
AACCTCCATCCTCCATGGGCTGATCCAGCTGGTGCTCGCCGAAATTCGGG
AACTGGAAGCAGGGTGGAACATACTTGAGAGGGTCGCCCAAAAGATGCCC
CCGCCCTCCCTCCCGTCCTCCCGCAGCGCCACACCGTCACCCCCACCCCC
TCCCTCGTCCTCCACCTTCACAACTCCTCCTCGTTACCGAGCGGCGTCTT
CCATGGCCGTGCCCATCTCCCGCATGGACTCGGAGGGGGAGGGTGGGAGG
CAGCGTGCCTCTTCCCTGGATGCTCCTGGGGTGCCGGCGAAGCCAATTGG
CGGGTCCGGGTCGCGGAGGGACGCAGGGGAAGAGGGAAAAAGAGGAGGGA
AAGAAAAGGGCAACAGCCCGTTTCGGAAGACGCTGGAGAACCTCTTCAAC
CGCAAGAGTCCCCCACGGTCGGAGGGAGGGGCGGAGGGAGGGGCGGAGGG
AGGGTCGGAGGGAAGGAAAGGGAAGACGCCCTCGCCTCCAAGGGACCAAA
GTGGGCTGCGGCCCGGACGGACTCCGACAAAGTGAGTGATCAAGAAGAAC
GAGCCCGACGTGTTGGCATTCACGGAGGATCTCCAATCCGTCCGACCCGC
CTCCAAGATCCTGTTGGAGATGGGGATCACTTTGGACTCTCTCCTCAAGC
TCCCGGAGGCCAAAGCCCACGACCGCAAAACCTCCATCCTCCATGGGCTG
ATCCAGCTGGTGCTCGCCGAAATTCGGGAACTGGAAGCAGGGTGGAACAT
ACTTGAGAGGGTCGCCCAAAAGATGCCCCCGCCCTCCCTCCCGTCCTCCC
GCAGCGCCACACCGTCACCCCCACCCCCTCCCTCGTCCTCCACCTTCACA
ACTCCTCCTCGTTACCGAGCGGCGTCTTCCATGGCCGTGCCCATCTCCCG
CATGGACTCGGAGGGGGAGGGTGGGAGGCAGCGTGCCTCTTCCCTGGATG
CTCCTGGGGTGCCGGCGAAGCCAATTGGCGGGTCCGGGTCGCGGAGGGAC
GCAGGGGAAGAGGGAAAAAGAGGAGGGAAAGAAAAGGGCAACAGCCCGTT
TCGGAAGACGCTGGAGAACCTCTTCAACCGCAAGAGTCCCCCACGGTCGG
AGGGAGGGGCGGAGGGAGGGGCGGAGGGAGGGTCGGAGGGAAGGAAAGGG
AAGACGCCCTCGCCTCCAAGGGACCAAAGTGGGCTGCGGCCCGGACGGAC
TCCGACAAAGTGAGTGATCAAGAAGAACGAGCCCGACGTGTTGGCATTCA
CGGAGGATCTCCAATCCGTCCGACCCGCCTCCAAGATCCTGTTGGAGATG
GGGATCACTTTGGACTCTCTCCTCAAGCTCCCGGAGGCCAAAGCCCACGA
CCGCAAAACCTCCATCCTCCATGGGCTGATCCAG
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Synonyms
Publications