EWM29955.1, cds718 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|585112547|gb|EWM29955.1| (formin like protein [Nannochloropsis gaditana]) HSP 1 Score: 439.499 bits (1129), Expect = 1.165e-155 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0 Query: 1 MGITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQKMPPPSLPSSRSATPSPPPPPSSSTFTTPPRYRAASSMAVPISRMDSEGEGGRQRASSLDAPGVPAKPIGGSGSRRDAGEEGKRGGKEKGNSPFRKTLENLFNRKSPPRSEGGAEGGAEGGSEGRKGKTPSPPRDQSGLRPGRTPTK 225 MGITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQKMPPPSLPSSRSATPSPPPPPSSSTFTTPPRYRAASSMAVPISRMDSEGEGGRQRASSLDAPGVPAKPIGGSGSRRDAGEEGKRGGKEKGNSPFRKTLENLFNRKSPPRSEGGAEGGAEGGSEGRKGKTPSPPRDQSGLRPGRTPTK Sbjct: 1 MGITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQKMPPPSLPSSRSATPSPPPPPSSSTFTTPPRYRAASSMAVPISRMDSEGEGGRQRASSLDAPGVPAKPIGGSGSRRDAGEEGKRGGKEKGNSPFRKTLENLFNRKSPPRSEGGAEGGAEGGSEGRKGKTPSPPRDQSGLRPGRTPTK 225
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|299473573|emb|CBN77968.1| (Formin-like 2 [Ectocarpus siliculosus]) HSP 1 Score: 82.8037 bits (203), Expect = 1.384e-14 Identity = 38/80 (47.50%), Postives = 56/80 (70.00%), Query Frame = 0 Query: 2 GITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQKMP 81 G TLDSLLKL AKA D+KTSILH L+ + ++N+P +L F +DL+ V PAS++L+ V AE+ +L G+ +R+ + P Sbjct: 2416 GFTLDSLLKLNTAKAFDKKTSILHYLVMLARRNDPTLLDFKDDLKHVFPASRLLISTVTAELSDLNKGYASFKRLVEGDP 2495
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|224012681|ref|XP_002294993.1| (hypothetical protein THAPSDRAFT_264774 [Thalassiosira pseudonana CCMP1335] >gi|220969432|gb|EED87773.1| hypothetical protein THAPSDRAFT_264774, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 76.2554 bits (186), Expect = 1.306e-12 Identity = 32/77 (41.56%), Postives = 56/77 (72.73%), Query Frame = 0 Query: 2 GITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQ 78 ITLDSLLKL EAKA DR+TS+LH L+ +++KN+ DVL ++D V+ A ++ +E++ +++E+ G +++ +A+ Sbjct: 262 AITLDSLLKLAEAKAFDRETSVLHYLVSIVQKNDEDVLKLSDDFVPVKAAERVAVEMLSQQLKEMTQGVKLIKEMAK 338
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|397564612|gb|EJK44277.1| (hypothetical protein THAOC_37194, partial [Thalassiosira oceanica]) HSP 1 Score: 76.2554 bits (186), Expect = 2.197e-12 Identity = 33/77 (42.86%), Postives = 56/77 (72.73%), Query Frame = 0 Query: 2 GITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQ 78 G TLD+LLKL EAKA D+KTS+L L++++K NEPD+L E++ S+ PA +++E +++E++EL + ++ A+ Sbjct: 1189 GFTLDALLKLDEAKAFDKKTSVLQYLVKIVKANEPDLLKVHEEMPSIVPAENVVVESLVSELKELNDQLDSVKATAE 1265
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|397575086|gb|EJK49527.1| (hypothetical protein THAOC_31591 [Thalassiosira oceanica]) HSP 1 Score: 74.3294 bits (181), Expect = 4.725e-12 Identity = 30/68 (44.12%), Postives = 52/68 (76.47%), Query Frame = 0 Query: 2 GITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAG 69 ITLDSLLKL EAKA D++TS LH L+ +++KN+ DVL +ED V+ A ++ ++++ ++++E+++G Sbjct: 129 AITLDSLLKLAEAKAFDKQTSALHYLVSIVQKNDEDVLNLSEDFVPVKAAERVAMDMLASQLKEMQSG 196
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|224007299|ref|XP_002292609.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971471|gb|EED89805.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 72.7886 bits (177), Expect = 3.304e-11 Identity = 31/65 (47.69%), Postives = 51/65 (78.46%), Query Frame = 0 Query: 2 GITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIREL 66 G TL++LLKL EAKA D+KTS+L L++++K NEPD+L E++ S+ PA +++E +++E+R+L Sbjct: 2724 GFTLEALLKLDEAKAFDKKTSVLQYLVKLVKSNEPDLLKVHEEMPSIGPAENVIVESLISELRDL 2788
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|641709333|ref|XP_008143749.1| (PREDICTED: protein diaphanous homolog 3 isoform X3 [Eptesicus fuscus]) HSP 1 Score: 70.0922 bits (170), Expect = 2.626e-10 Identity = 37/116 (31.90%), Postives = 62/116 (53.45%), Query Frame = 0 Query: 1 MGITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQKMPPPSLPSSRSATPSPPPPPSSSTFTTPPRYRAASSM 116 G L SL KL + K+ D+KT++LH L+++ ++ PD+L F EDLQ + ASK+ +E++ ++++ LER + PPP + T SS +T +Y S + Sbjct: 804 FGFNLSSLCKLKDTKSADQKTTLLHFLVEICEEKYPDILNFVEDLQHLDKASKVSVEMLEKNLKQMGRQLQQLERDLETFPPPEDVHDKFVTKM-----SSFVISTKEQYENLSKL 914
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|1150087039|ref|XP_020229154.1| (formin-like protein 13 isoform X2 [Cajanus cajan]) HSP 1 Score: 69.3218 bits (168), Expect = 4.864e-10 Identity = 46/135 (34.07%), Postives = 71/135 (52.59%), Query Frame = 0 Query: 1 MGITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQKMPPPSLPSSRSATPSPPPPPSSSTFTTPPRYRAASSMAVPISRMDSEGEGGRQRAS 135 +G LDSLLKL E +A DRK +++H L +V+ P+VL F++DL ++ PA+KI L+ + E++ L G LE+V Q++ S S P TF+ P + + SR + +QRAS Sbjct: 1063 IGFRLDSLLKLTETRARDRKMTLMHYLCKVLVDKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQALNKG---LEKVVQEL-------STSENDGPISESFRKTFSAPQHTPTKTRLQ---SRTKTHNPVKKQRAS 1184
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|1150087041|ref|XP_020229155.1| (formin-like protein 13 isoform X3 [Cajanus cajan]) HSP 1 Score: 68.9366 bits (167), Expect = 6.390e-10 Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 0 Query: 1 MGITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQKM 80 +G LDSLLKL E +A DRK +++H L +V+ P+VL F++DL ++ PA+KI L+ + E++ L G LE+V Q++ Sbjct: 1063 IGFRLDSLLKLTETRARDRKMTLMHYLCKVLVDKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQALNKG---LEKVVQEL 1139
BLAST of EWM29955.1 vs. NCBI_GenBank
Match: gi|1150087033|ref|XP_020229150.1| (formin-like protein 13 isoform X1 [Cajanus cajan] >gi|1150087035|ref|XP_020229151.1| formin-like protein 13 isoform X1 [Cajanus cajan] >gi|1150087037|ref|XP_020229152.1| formin-like protein 13 isoform X1 [Cajanus cajan]) HSP 1 Score: 68.9366 bits (167), Expect = 6.463e-10 Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 0 Query: 1 MGITLDSLLKLPEAKAHDRKTSILHGLIQVIKKNEPDVLAFTEDLQSVRPASKILLELVLAEIRELEAGWNILERVAQKM 80 +G LDSLLKL E +A DRK +++H L +V+ P+VL F++DL ++ PA+KI L+ + E++ L G LE+V Q++ Sbjct: 1063 IGFRLDSLLKLTETRARDRKMTLMHYLCKVLVDKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQALNKG---LEKVVQEL 1139 The following BLAST results are available for this feature:
BLAST of EWM29955.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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