rna703, rna703 (mRNA) Nannochloropsis gaditana

Overview
Namerna703
Unique Namerna703
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1644
Alignment locationCM002456.1:211541..212751 +

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Properties
Property NameValue
Productprotein kinase domain protein
Orig transcript idgnl|cribi|Naga_100200g9.10014.mrna
Orig protein idgnl|cribi|Naga_100200g9.10014
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:211541..212751 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100200g9gene674Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna703rna703-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29965.1cds703Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna703 ID=rna703|Name=rna703|organism=Nannochloropsis gaditana|type=mRNA|length=1644bp
CAACACTAAATTACAGAAATGGGGCGGGTGCTGCCTTCCAAAAGTCATGC
TCTAGTGATAACTGCCCTTATGATCATGACAAGCGATGCTTTTGTTCCGC
CGCGGCCAAGACTGATGCCGATTGAGCACTTAACGGGACCTTCAATCGCG
CGCCCGACCACATATGCTACCAAGGGTGGGCCTGCCCCCCTCCCTTTCCG
AGCTATTTCCGATCCCGCCAGCTTCTCGACGAAACGATTAGCAGCAATGG
GGTGTACACAGCACGTGGCAAGCGGTGCCATTCCGTTCACCGCCACTTTG
ATGGCAAGCATGCAGACTTCTCCGTGGTGGGTATGGAGCATGCTGCTTCT
TGCGTCCACCACTGGTGTTGCCGCCGAGCGCACCAAAATCGGAGCCGCAC
TTTCCTCCCCCCTCATAACCATGGCAGTGGCCCTCGTTGCTTGCAACCTC
GGCTTCTTGCCCAGTGCAGCCCCTGCGTACACGTCCGTCAACAAGTTTCT
GGTGCCACTGGCCATCCCCCTCCTCCTCCTCGACGCTAATCTGTTCAAGG
TCCTGACGCAGACCGGCCGCTTGCTACGGTCCTTCGTCCTAGGAAGCATT
GGAACTGTCCTAGGAACGCTGATTGCAGCATGGTTCGTACCTTTAGGGAG
TTTAGGGGCTGCTGGTAAGGAAGGGTGGATGATAGCAGCAGCACTTGCCA
GTCGACACATTGGAGGGGCGGTGAACTTTGTGGCAGTGAGCGAAACCTTG
GGCATGTCTGCAGAATTGACGGCCGCGGGCATTGCAGCGGACAACTTGGT
GGTTTCCTTCTACTTTGGCCTTCTCTTCTGGTTGGCACGAGACTTGGAGC
CAGAAGACGAGGTGCTACATGCAAACGGGGGGGGCGGGGGAGGTCCCAAA
GGTACGCGTGAGCCGGTCGAGCAAGCTACCTGGAGTGCGACAGAGCCGCC
TTCCTTAGGGTACTTGAAGGCCCTAAGCTTGGCAAGTCTTCTCTGCATGG
TTGGGACTTGGGTCAGTGAGGGGCTTCTCCAGGGGGCAATTTCCTCCATC
CCAGTCATCTCCCTCCTCTCCGTCGCCACCGCCACGCTCTTTCCCCGTGC
CTGCAGCAGCGTCACCGAGCCAGCCGGCCACCTGGCCGTCATCCTCATGA
ATCTTTTCTTCTCGGTCACGGGAGCCCAAGGAAAACTCAGTCAAGTCCTT
GTCACCGCCCCTCGTCTCTTCCTCCTTTCCGCCGTGCAACTTGTCTTCCA
TCTGACCTTCCTCCTTGGCGCCGGCCGAGGGCTTCTCCGCCTCCCGCTCA
AAGAACTCCTGGTGGCTTCCAACGCCAATGTGGGTGGACCTACCACGGCG
GCGGCGATGGCGGGAAGCAAGCGATGGAAGAGTTTGGTCCTTCCGGGTAT
CCTGACCGGAATTTTGGGCTACGCCTCCGCCACATTCATTGGTCTTGCGT
TGGGAAGGTCGGTGTTGGCAAAGATAGTGACCAGGGGGGTGTGAGCAGAG
GAAAACGAGCCGGGAGAAAGGGGAGGGGGTGACAATGTACATAAATCCTA
CAGGGTAGTCAGTGCGAAAATACAACGAGTGTACCGAGTCTATACCACTA
TAACGACCTGAAACTAAGGCAAGTTGCTCTCCGCGATCCCCACG
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protein sequence of rna703

>rna703-protein ID=rna703-protein|Name=rna703|organism=Nannochloropsis gaditana|type=polypeptide|length=307bp
MGNCCCKSLRVRDGSAFDESSALDPGNVDSRHFDIQRTLGEGGFGKVNAV
IKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNA
HYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLAL
DFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTT
TSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPFPHDLFEKL
YHHGEEAAYYKNATTAAGQHSLFTSHTGKGTSKEAQALIRQLLRMHPEHR
GSRKEGG
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mRNA from alignment at CM002456.1:211541..212751+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna703 ID=rna703|Name=rna703|organism=Nannochloropsis gaditana|type=mRNA|length=1211bp|location=Sequence derived from alignment at CM002456.1:211541..212751+ (Nannochloropsis gaditana)
ATGGGAAATTGTTGCTGTAAATCGCTACGTGTACGGGACGGGAGCGCATT
TGACGAATCGAGCGCTTTAGATCCTGGAAACGTAGACAGCCGTCATTTTG
ACATCCAGAGGAccctgggcgagggcggcttTGGAAAAGTTAATGCCGTT
ATTAAAAAGTCTGGCCCAGATTCTGGAAAATGGTACGCGATGAAAGCGCT
GGTGAAAGAAGTCATTGTCCGCAAAAAAATGCACGAGGAAGTCATGCGTG
AATTGAGCCTACTTTGCGAGCTAGGAGGTAGCCATTTTGTTTGCAATGCA
CACTACGCATTTCAAGATAGTGCCAACCTTTATTTGGTTCTTGATTTGTA
CCTCGGTGGAGACCTGCGGTATCATTTGGAAAaagcctccccccgccagc
TTTCTGCAGCTCAAGTGTGCTTCTACGGGGCTTCCCTGTTGTTGGCCCTG
GACTTCTTGCACTCCCGGGGGGTACTACATCGTGACATAAAGCCTGAAAA
TGTGCTCATGGACGACACGGGCTACATTGCCTTGACCGACTTGGGTGTTT
CTGCCAAGGTTGCTGGTGCGTCAACAAGGGAAAAGTTAATATGTACTACT
ACTAGCGGAACGCCTGGGTATATGGCCCCGGAGATATTTTGGGAAACTCA
CCAGCATGGAATTCCTTCGGAAGCTTTTTCATTGGGCGTCTTGCTCTATG
AGCTTTGTACGGGAAGCCGGCCATTTCCACACGATTTGTTCGAGAAACTC
TACCAccatggggaggaagctgcCTACTACAAAAATGCCACGACTGCTGC
AGGACAACATTCTCTATTCACTAGTCACACCGGTAAAGGGACGAGCAAAG
AGGCACAGGCGTTGATCCGGCAGCTCCTGAGAATGCACCCAGAGCACCGT
GGGGTCAGtggcgtggagggcgtgctTTCTCTTCAGACTCACCCTGTCTT
CGCCGGACTGGACTGGGAAGCCCTGAGCTCCAAGACGTTGCCGCCACCAT
TTATCCCCAAGGACGAAGCGAATATCAAGGCAAATGTGGATGATCTTTTT
GCAAgcgaggatgaagggggacgggccgcgcaaaagaaaaagcaagggga
ggTAGTTTATCTCACCCCGGAGGACCAAGCATCCTTTGCTTCGTATAAGT
ACGATCATCGTTATGCGATCCTGGTGTCGACCCATGGCAGTCccgaaaag
agggaggatag
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Coding sequence (CDS) from alignment at CM002456.1:211541..212751+

>rna703 ID=rna703|Name=rna703|organism=Nannochloropsis gaditana|type=CDS|length=1848bp|location=Sequence derived from alignment at CM002456.1:211541..212751+ (Nannochloropsis gaditana)
ATGGGAAATTGTTGCTGTAAATCGCTACGTGTACGGGACGGGAGCGCATT
TGACGAATCGAGCGCTTTAGATCCTGGAAACGTAGACAGCCGTCATTTTG
ACATCCAGAGGAccctgggcgagggcggcttTGGAAAAGTTAATGCCGTT
ATTAAAAAGTCTGGCCCAGATTCTGGAAAATGGTACGCGATGAAAGCGCT
GGTGAAAGAAGTCATTGTCCGCAAAAAAATGCACGAGGAAGTCATGCGTG
AATTGAGCCTACTTTGCGAGCTAGGAGGTAGCCATTTTGTTTGCAATGCA
CACTACGCATTTCAAGATAGTGCCAACCTTTATTTGGTTCTTGATTTGTA
CCTCGGTGGAGACCTGCGGTATCATTTGGAAAaagcctccccccgccagc
TTTCTGCAGCTCAAGTGTGCTTCTACGGGGCTTCCCTGTTGTTGGCCCTG
GACTTCTTGCACTCCCGGGGGGTACTACATCGTGACATAAAGCCTGAAAA
TGTGCTCATGGACGACACGGGCTACATTGCCTTGACCGACTTGGGTGTTT
CTGCCAAGGTTGCTGGTGCGTCAACAAGGGAAAAGTTAATATGTACTACT
ACTAGCGGAACGCCTGGGTATATGGCCCCGGAGATATTTTGGGAAACTCA
CCAGCATGGAATTCCTTCGGAAGCTTTTTCATTGGGCGTCTTGCTCTATG
AGCTTTGTACGGGAAGCCGGCCATTTCCACACGATTTGTTCGAGAAACTC
TACCAccatggggaggaagctgcCTACTACAAAAATGCCACGACTGCTGC
AGGACAACATTCTCTATTCACTAGTCACACCGGTAAAGGGACGAGCAAAG
AGGCACAGGCGTTGATCCGGCAGCTCCTGAGAATGCACCCAGAGCACCGT
GGGTCccgaaaagagggaggatagATGGGAAATTGTTGCTGTAAATCGCT
ACGTGTACGGGACGGGAGCGCATTTGACGAATCGAGCGCTTTAGATCCTG
GAAACGTAGACAGCCGTCATTTTGACATCCAGAGGAccctgggcgagggc
ggcttTGGAAAAGTTAATGCCGTTATTAAAAAGTCTGGCCCAGATTCTGG
AAAATGGTACGCGATGAAAGCGCTGGTGAAAGAAGTCATTGTCCGCAAAA
AAATGCACGAGGAAGTCATGCGTGAATTGAGCCTACTTTGCGAGCTAGGA
GGTAGCCATTTTGTTTGCAATGCACACTACGCATTTCAAGATAGTGCCAA
CCTTTATTTGGTTCTTGATTTGTACCTCGGTGGAGACCTGCGGTATCATT
TGGAAAaagcctccccccgccagcTTTCTGCAGCTCAAGTGTGCTTCTAC
GGGGCTTCCCTGTTGTTGGCCCTGGACTTCTTGCACTCCCGGGGGGTACT
ACATCGTGACATAAAGCCTGAAAATGTGCTCATGGACGACACGGGCTACA
TTGCCTTGACCGACTTGGGTGTTTCTGCCAAGGTTGCTGGTGCGTCAACA
AGGGAAAAGTTAATATGTACTACTACTAGCGGAACGCCTGGGTATATGGC
CCCGGAGATATTTTGGGAAACTCACCAGCATGGAATTCCTTCGGAAGCTT
TTTCATTGGGCGTCTTGCTCTATGAGCTTTGTACGGGAAGCCGGCCATTT
CCACACGATTTGTTCGAGAAACTCTACCAccatggggaggaagctgcCTA
CTACAAAAATGCCACGACTGCTGCAGGACAACATTCTCTATTCACTAGTC
ACACCGGTAAAGGGACGAGCAAAGAGGCACAGGCGTTGATCCGGCAGCTC
CTGAGAATGCACCCAGAGCACCGTGGGTCccgaaaagagggaggatag
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Synonyms
Publications