EWM29965.1, cds703 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|585112566|gb|EWM29965.1| (protein kinase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0 Query: 1 MGNCCCKSLRVRDGSAFDESSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPFPHDLFEKLYHHGEEAAYYKNATTAAGQHSLFTSHTGKGTSKEAQALIRQLLRMHPEHRGSRKEGG 307 MGNCCCKSLRVRDGSAFDESSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPFPHDLFEKLYHHGEEAAYYKNATTAAGQHSLFTSHTGKGTSKEAQALIRQLLRMHPEHRGSRKEGG Sbjct: 1 MGNCCCKSLRVRDGSAFDESSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPFPHDLFEKLYHHGEEAAYYKNATTAAGQHSLFTSHTGKGTSKEAQALIRQLLRMHPEHRGSRKEGG 307
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|570974786|gb|ETP37052.1| (CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica P10297]) HSP 1 Score: 199.519 bits (506), Expect = 7.418e-58 Identity = 102/225 (45.33%), Postives = 142/225 (63.11%), Query Frame = 0 Query: 18 DESSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPF 242 D+++ DP + +HF+I R +G+GGFGKVNAVI+K KW AMK L K ++ + + E +LL ++ S + H+ FQD N Y+++DL LGGDL+YHL ++ + FY A +LL+L++LHS +LHRD+KPENV++DD GY LTDLG+S + A L + SGT YMAPEIF + +HG PS+ FSLGVL YEL G RP+ Sbjct: 10 DDNAPYDPKVISIKHFEIHRIVGQGGFGKVNAVIRKKATPV-KWLAMKTLSKAAVINRNCVSMIWNERNLLTQIQ-SPLIVRMHHTFQDPYNCYVIMDLLLGGDLKYHL-RSRKDGFQETEAKFYTAGILLSLEYLHSLKILHRDVKPENVILDDKGYPRLTDLGISVQTAN------LRFQSRSGTVAYMAPEIFRGSTEHGTPSDFFSLGVLTYELLFGRRPW 225
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|675204257|ref|XP_008911013.1| (CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica INRA-310] >gi|567953672|gb|ETK79319.1| CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica] >gi|567982308|gb|ETL32730.1| CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica] >gi|568011819|gb|ETL85997.1| CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica] >gi|568088932|gb|ETN03786.1| CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica INRA-310] >gi|570319911|gb|ETO67859.1| CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica P1976] >gi|570943764|gb|ETP09021.1| CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica CJ01A1] >gi|970650117|gb|KUF89221.1| hypothetical protein AM588_10002143 [Phytophthora nicotianae]) HSP 1 Score: 199.519 bits (506), Expect = 8.169e-58 Identity = 102/225 (45.33%), Postives = 142/225 (63.11%), Query Frame = 0 Query: 18 DESSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPF 242 D+++ DP + +HF+I R +G+GGFGKVNAVI+K KW AMK L K ++ + + E +LL ++ S + H+ FQD N Y+++DL LGGDL+YHL ++ + FY A +LL+L++LHS +LHRD+KPENV++DD GY LTDLG+S + A L + SGT YMAPEIF + +HG PS+ FSLGVL YEL G RP+ Sbjct: 10 DDNAPYDPKVISIKHFEIHRIVGQGGFGKVNAVIRKKATPV-KWLAMKTLSKAAVINRNCVSMIWNERNLLTQIQ-SPLIVRMHHTFQDPYNCYVIMDLLLGGDLKYHL-RSRKDGFQETEAKFYTAGILLSLEYLHSLKILHRDVKPENVILDDKGYPRLTDLGISVQTAN------LRFQSRSGTVAYMAPEIFRGSTEHGTPSDFFSLGVLTYELLFGRRPW 225
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|566016199|gb|ETI39110.1| (CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica P1569] >gi|568041781|gb|ETM39156.1| CILIATE-E2/CILIATE-E2-UNCLASSIFIED protein kinase [Phytophthora parasitica]) HSP 1 Score: 197.593 bits (501), Expect = 3.741e-57 Identity = 101/225 (44.89%), Postives = 142/225 (63.11%), Query Frame = 0 Query: 18 DESSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPF 242 D+++ DP + +HF+I R +G+GGFGKVNAVI+K KW AMK L K ++ + + E +LL ++ S + H+ FQD N Y+++DL LGG+L+YHL ++ + FY A +LL+L++LHS +LHRD+KPENV++DD GY LTDLG+S + A L + SGT YMAPEIF + +HG PS+ FSLGVL YEL G RP+ Sbjct: 10 DDNAPYDPKVISIKHFEIHRIVGQGGFGKVNAVIRKKATPV-KWLAMKTLSKAAVINRNCVSMIWNERNLLTQIQ-SPLIVRMHHTFQDPYNCYVIMDLLLGGNLKYHL-RSRKDGFQETEAKFYTAGILLSLEYLHSLKILHRDVKPENVILDDKGYPRLTDLGISVQTAN------LRFQSRSGTVAYMAPEIFRGSTEHGTPSDFFSLGVLTYELLFGRRPW 225
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|970633734|gb|KUF79267.1| (serine/threonine-protein kinase [Phytophthora nicotianae]) HSP 1 Score: 193.741 bits (491), Expect = 3.937e-53 Identity = 99/215 (46.05%), Postives = 136/215 (63.26%), Query Frame = 0 Query: 28 VDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPF 242 + +HF+I R +G+GGFGKVNAVI+K KW AMK L K ++ + + E +LL ++ S + H+ FQD N Y+++DL LGGDL+YHL ++ + FY A +LL+L++LHS +LHRD+KPENV++DD GY LTDLG+S + A L + SGT YMAPEIF + +HG PS+ FSLGVL YEL G RP+ Sbjct: 308 ISIKHFEIHRIVGQGGFGKVNAVIRKKA-TPVKWLAMKTLSKAAVINRNCVSMIWNERNLLTQIQ-SPLIVRMHHTFQDPYNCYVIMDLLLGGDLKYHL-RSRKDGFQETEAKFYTAGILLSLEYLHSLKILHRDVKPENVILDDKGYPRLTDLGISVQTAN------LRFQSRSGTVAYMAPEIFRGSTEHGTPSDFFSLGVLTYELLFGRRPW 513
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|145485303|ref|XP_001428660.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124395747|emb|CAK61262.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 186.808 bits (473), Expect = 9.995e-53 Identity = 108/273 (39.56%), Postives = 156/273 (57.14%), Query Frame = 0 Query: 28 VDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPFPHDLFEKLYHHGEEAAYYKNATTAAGQHSLFTSHTGKGTSKEAQALIRQLLRMHPEHR 300 + +HF +Q +G GGFGKV V KS ++YAMK + K +++ K+ V+ EL LL L S F+ NA AFQD N+YLVLD GGDLRYHL + R+ + Q F +L+ L++LHSR ++HRD+KPEN+++D GY+ +TDLGV+ K+ + TSGTPGYMAPE+ +HGIP++ +SLGV+ YEL G RP+ +G+ ++A A +G S +A I +L++ P HR Sbjct: 71 LSKKHFQLQYVIGIGGFGKVWKVTYKS-----QYYAMKEMSKALVIYKRSVASVINELRLLQNLNHS-FIVNAIAAFQDKQNIYLVLDYLQGGDLRYHLGRN--RRFNEEQTKFIVCCVLVGLEYLHSRRIIHRDLKPENLVLDSKGYVRITDLGVARKLDN-------MQIDTSGTPGYMAPEVMCGL-EHGIPADYYSLGVIAYELMLGKRPY----------YGQNRKEIRDAILAKQAQ---IKQKLEGWSLDAIDFINKLIQRKPSHR 314
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|145509783|ref|XP_001440830.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124408058|emb|CAK73433.1| unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 184.882 bits (468), Expect = 1.431e-52 Identity = 114/300 (38.00%), Postives = 163/300 (54.33%), Query Frame = 0 Query: 1 MGNCCCKSLRVRDGSAFDESSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPFPHDLFEKLYHHGEEAAYYKNATTAAGQHSLFTSHTGKGTSKEAQALIRQLLRMHPEHR 300 MGNC + D+ R+++I LG+GGFGKV V +K + + YAMK + K IV KK V+ E +LL +L F+ N H AFQD NLYLVLDL GGDLRYHL K ++ S + F+ A ++++L++LH G+LHRD+KPEN++ D+ GY+ LTD+G+ A+V + TSGTPGYMAPE+ + +HGI + F+LGV+LYE G RP+ +++ + Q + S S EA I QL++ PE+R Sbjct: 1 MGNC----------NVLDKKEEFQEAMQSIRNYEILDILGKGGFGKVIRVRRKK---NNQLYAMKIMSKAKIVEKKCVSSVLNEKNLLKQLHHP-FIVNMHSAFQDRENLYLVLDLLSGGDLRYHLFKN--KRFSEEEAQFFAACIIVSLEYLHQNGILHRDLKPENLVFDEQGYLRLTDMGI-ARVWRPDN-----ASDTSGTPGYMAPEVMCKL-KHGIAVDFFALGVILYECMLGKRPYVGKTRQEIRDQ-----------ILSKQIQIKRSQLPVAWSIEAGDFINQLIQRKPENR 266
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|145539790|ref|XP_001455585.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124423393|emb|CAK88188.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 185.267 bits (469), Expect = 1.863e-52 Identity = 110/300 (36.67%), Postives = 160/300 (53.33%), Query Frame = 0 Query: 1 MGNCCCKSLRVRDGSAFDESSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPFPHDLFEKLYHHGEEAAYYKNATTAAGQHSLFTSHTGKGTSKEAQALIRQLLRMHPEHR 300 MGNC KS D + S +F + +G+GGFGKV V K S YAMK + K I+ KK + VM EL LL +L +F+ N AFQD NLYLV+DL GGDLRYHL K R+ + Q F+ ++L+L++LH G+LHRD+KPEN++ DD GY+ LTD+G++ + + ++ TSGTPGYMAPE+ + HG+ + ++LGV++YE G RP+ +++ A Q + + G S EA +L++ P +R Sbjct: 1 MGNCTLKSTESEDQTVISIS-----------NFTQKSVIGKGGFGKVWMVENKK---SKSLYAMKIMSKAKIIAKKSVQSVMNELQLLSQLK-HNFIINMQAAFQDRDNLYLVMDLLTGGDLRYHLCKQ--RKFTEEQTKFFVVCIILSLEYLHVNGILHRDVKPENLVFDDKGYLKLTDMGIARQWKPENAQD------TSGTPGYMAPEVMCRQN-HGVGVDYYALGVIVYECIMGKRPYVGKSRQEIRDQ-----------VIAKQVQIKNNDIPTGWSLEAVDFANKLIQRKPANR 265
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|1134892591|gb|OMJ89848.1| (hypothetical protein SteCoe_7930 [Stentor coeruleus]) HSP 1 Score: 184.496 bits (467), Expect = 2.350e-52 Identity = 105/281 (37.37%), Postives = 155/281 (55.16%), Query Frame = 0 Query: 20 SSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPFPHDLFEKLYHHGEEAAYYKNATTAAGQHSLFTSHTGKGTSKEAQALIRQLLRMHPEHR 300 + + P + FD Q +G GGFGKV +++ G + YAMK ++K IV K+ V+ E LL L F+ N +AFQD NLYL +DL GGDLRYH+ + +LS Q F+ A ++ L++LH ++HRDIKPEN+++D GY+ +TD G++ ++ ++R+ TSGTPGYMAPE+ +HGI + F+LGV++YE TG RP+ +++ H A Q L S +G S EA + +LL PE R Sbjct: 7 TEIIKPSQLSRSDFDFQYAIGRGGFGKV-WIVEFRG--DHQIYAMKEMMKLRIVSKQSVNSVLNEQKLLSVLRHP-FLVNMKFAFQDRENLYLAMDLMKGGDLRYHINQQE--RLSEEQTKFFAACIVTGLEYLHVNSIIHRDIKPENLVLDSKGYLRITDFGIARIISSDNSRD------TSGTPGYMAPEVL-NRQRHGIAVDYFALGVIVYEFMTGRRPYLGRSRKEIKEH-----------IMARQARLVKSQVPEGWSLEAVDFVNKLLERKPEER 263
BLAST of EWM29965.1 vs. NCBI_GenBank
Match: gi|1134872903|gb|OMJ71070.1| (hypothetical protein SteCoe_30827 [Stentor coeruleus]) HSP 1 Score: 181.8 bits (460), Expect = 3.071e-51 Identity = 104/281 (37.01%), Postives = 154/281 (54.80%), Query Frame = 0 Query: 20 SSALDPGNVDSRHFDIQRTLGEGGFGKVNAVIKKSGPDSGKWYAMKALVKEVIVRKKMHEEVMRELSLLCELGGSHFVCNAHYAFQDSANLYLVLDLYLGGDLRYHLEKASPRQLSAAQVCFYGASLLLALDFLHSRGVLHRDIKPENVLMDDTGYIALTDLGVSAKVAGASTREKLICTTTSGTPGYMAPEIFWETHQHGIPSEAFSLGVLLYELCTGSRPFPHDLFEKLYHHGEEAAYYKNATTAAGQHSLFTSHTGKGTSKEAQALIRQLLRMHPEHR 300 + + P ++ F Q +G GGFGKV V++ G + YAMK ++K I+ K+ V+ E LL L F+ N +AFQD NLYLV+DL GGDLRYH+ + + S F+ A ++ L++LH ++HRDIKPEN+++D+ GY+ +TD G++ + +TR+ TSGTPGYMAPE+ +H IP + F+LGV++YE TG RP+ G K++ Q L S KG S E+ + +LL PE+R Sbjct: 7 TEIITPTHLSKSDFAFQYAIGRGGFGKV-WVVEFRGDEQD--YAMKEMMKLRIISKQSVNSVLNEQKLLSVLRHP-FIVNMKFAFQDRDNLYLVMDLMKGGDLRYHINQHE--RFSEEITKFFTACIVTGLEYLHINSIIHRDIKPENLVLDNKGYLRITDFGIARIITSDNTRD------TSGTPGYMAPEVL-NRQRHSIPVDYFALGVIIYEFMTGRRPY----------LGRSRKEIKDSIMGR-QAKLVKSQVPKGWSLESVDFVNKLLERKPENR 263 The following BLAST results are available for this feature:
BLAST of EWM29965.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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