EWM29974.1, cds698 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29974.1 vs. NCBI_GenBank
Match: gi|585112577|gb|EWM29974.1| (hypothetical protein Naga_100383g2 [Nannochloropsis gaditana]) HSP 1 Score: 683.715 bits (1763), Expect = 0.000e+0 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0 Query: 1 MRWWHRLLTYLSSRRRDTTSHCSYMTQEQSPLSPSISIPAFVLQERGILSPAKPPPLESQSMNFDERKSNYEECDKETSETREEISDGTLSSVEGEQAQNSTGVPLRAPSFSTTQSVHSVMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEVVLSYMNRTDGGQQYTPLASAPLPRIQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQGRATFLNAAATLRLHVRALGFIRIVRRFEIDCSVATLWGEPTKADGSKDTVSDCFGAFV 330 MRWWHRLLTYLSSRRRDTTSHCSYMTQEQSPLSPSISIPAFVLQERGILSPAKPPPLESQSMNFDERKSNYEECDKETSETREEISDGTLSSVEGEQAQNSTGVPLRAPSFSTTQSVHSVMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEVVLSYMNRTDGGQQYTPLASAPLPRIQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQGRATFLNAAATLRLHVRALGFIRIVRRFEIDCSVATLWGEPTKADGSKDTVSDCFGAFV Sbjct: 1 MRWWHRLLTYLSSRRRDTTSHCSYMTQEQSPLSPSISIPAFVLQERGILSPAKPPPLESQSMNFDERKSNYEECDKETSETREEISDGTLSSVEGEQAQNSTGVPLRAPSFSTTQSVHSVMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEVVLSYMNRTDGGQQYTPLASAPLPRIQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQGRATFLNAAATLRLHVRALGFIRIVRRFEIDCSVATLWGEPTKADGSKDTVSDCFGAFV 330
BLAST of EWM29974.1 vs. NCBI_GenBank
Match: gi|585109033|gb|EWM26903.1| (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 102.449 bits (254), Expect = 5.239e-21 Identity = 69/212 (32.55%), Postives = 113/212 (53.30%), Query Frame = 0 Query: 120 VMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEV-VLSYMNRTDGGQQYTPLASAPLPRIQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQGRATFLNAAATLRLHVRALGFIRIVRRFEIDCSVATLWGEPTKADGSKDT-VSDCFGAF 329 ++ I + L+ +P+WKYR + +S+++ +I LLL VS+VYGFG+ H+ V + P + +G+ P+R+ + ++NPN F I +++ V S+ R+ G + L + +P LHAR + FV+ L + G + AVL G TF A L V +LGF+ I R + ++C+V WG KD +SDC+G F Sbjct: 180 IVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLP--LPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPG----SLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWG--------KDILLSDCYGRF 377
BLAST of EWM29974.1 vs. NCBI_GenBank
Match: gi|553181298|ref|XP_005853540.1| (hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526] >gi|422295520|gb|EKU22819.1| hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 100.138 bits (248), Expect = 1.204e-20 Identity = 67/204 (32.84%), Postives = 109/204 (53.43%), Query Frame = 0 Query: 128 LHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTT-PLAPNLVDAEGNAPMRATISLDNPNSFPITASASEVVLSYMNRTDGGQQYTPLASAPLPR-IQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQGRATFLNAAATLRLHVRALGFIRIVRRFEIDCSVATLWGEPTKADGSKDTVSDCFGAF 329 LHH+P+W+YR L ++++ + L L+L VS++YGF + H+ VT L P VD+ G+ P+ +TI NPNSF T+S S + + + + L + PR I+L + +F L + + G A + AVL+G+ L +T ++ V+ LG I R F+++C+V WGE + T+SDC+G F Sbjct: 112 LHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYAL----PSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEGQNCLLYTTSTSKITVKGLGLIPTSRNFKVECTVLRKWGE------NPLTLSDCYGRF 305
BLAST of EWM29974.1 vs. NCBI_GenBank
Match: gi|553181303|ref|XP_005853541.1| (hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526] >gi|422295521|gb|EKU22820.1| hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 73.559 bits (179), Expect = 5.743e-11 Identity = 73/271 (26.94%), Postives = 115/271 (42.44%), Query Frame = 0 Query: 120 VMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEVV----LSYMNR---------------------TDGGQQYTP-------LASAPLPRIQLHARHKDCMLTTDFVLAHLPT-----------KPEGKAI-----------------MGAVLQGRATFLNAAATLRLHVRALGFIRIVRRFEIDCSVATLWGEPTKADGSKDT-VSDCFGAF 329 ++ I + L+ +P+WKYR + +S+++ +I LLL VS+VYGFG+ H+ V + P + +G+ P+R+ + ++NPN F I S + + LS + R TD P L + +P LHAR + FV+ L + EG+ + AVL G TF A L V +LGF+ I R + ++C+V WG KD +SDC+G F Sbjct: 149 IVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLP--LPPDGSLPVRSLMRVNNPNRFSILHSPARNLGSGTLSQLTRFRRMLAPRVRLPFLVSGQVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEKSFGLSFRIDGEGRRVDVRFSYLSHPSQGGPDLAEAVLTGGPTFFYTRAKAELTVMSLGFMSIGRAYILECTVLKYWG--------KDILLSDCYGRF 409
BLAST of EWM29974.1 vs. NCBI_GenBank
Match: gi|585109034|gb|EWM26904.1| (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 64.6994 bits (156), Expect = 1.336e-8 Identity = 43/138 (31.16%), Postives = 77/138 (55.80%), Query Frame = 0 Query: 120 VMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEV-VLSYMNRTDGGQQYTPLASAPLPRIQLHARHKDCMLTTDFVLAHL 256 ++ I + L+ +P+WKYR + +S+++ +I LLL VS+VYGFG+ H+ V + P + +G+ P+R+ + ++NPN F I +++ V S+ R+ G + L + +P LHAR + FV+ L Sbjct: 56 IVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLP--LPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPG----SLLGVSTIPEHLLHAREGAHTTESVFVVRDL 187
BLAST of EWM29974.1 vs. NCBI_GenBank
Match: gi|585109030|gb|EWM26900.1| (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 62.003 bits (149), Expect = 3.342e-7 Identity = 47/146 (32.19%), Postives = 77/146 (52.74%), Query Frame = 0 Query: 128 LHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTT-PLAPNLVDAEGNAPMRATISLDNPNSFPITASASEVVLSYMNRTDGGQQYTPLASAPLPR-IQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQ 271 LHH+P+W+YR L ++++ + L L+L VS++YGF + H+ VT L P VD+ G+ P+ +TI NPNSF T+S S + + + + L + PR I+L + +F L + + G A + AVL+ Sbjct: 112 LHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALP----SRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLE 253 The following BLAST results are available for this feature:
BLAST of EWM29974.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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