EWM29980.1, cds692 (CDS) Nannochloropsis gaditana

Overview
NameEWM29980.1
Unique Namecds692
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:171592..173400 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29980.1
ProductImportin-beta
Orig transcript idgnl|cribi|Naga_101042g2.10360.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:171592..173400 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO:0008536Ran GTPase binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR001494Importin-beta_N
Homology
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|585112587|gb|EWM29980.1| (Importin-beta [Nannochloropsis gaditana])

HSP 1 Score: 1206.43 bits (3120), Expect = 0.000e+0
Identity = 602/602 (100.00%), Postives = 602/602 (100.00%), Query Frame = 0
Query:    1 MEAALAHIEHACELLQTDPMRASEILLALRSNPEALGVARHVLEHSTNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEAARSLEEDAEEEAEAIATANVEEQVVNMAGLGRLAPAASVLDLHGRLLAPLGGTDNGGGAPRPGV 602
            MEAALAHIEHACELLQTDPMRASEILLALRSNPEALGVARHVLEHSTNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEAARSLEEDAEEEAEAIATANVEEQVVNMAGLGRLAPAASVLDLHGRLLAPLGGTDNGGGAPRPGV
Sbjct:    1 MEAALAHIEHACELLQTDPMRASEILLALRSNPEALGVARHVLEHSTNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEAARSLEEDAEEEAEAIATANVEEQVVNMAGLGRLAPAASVLDLHGRLLAPLGGTDNGGGAPRPGV 602          
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|298710876|emb|CBJ26385.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 185.652 bits (470), Expect = 2.527e-46
Identity = 176/585 (30.09%), Postives = 259/585 (44.27%), Query Frame = 0
Query:    2 EAALAHIEHACELLQTDPMRASEILLALRSNPEALGVARHVLEHSTNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRL-HLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEAARSLEEDAEEEAEAIATANVEEQVVNMAGLGR--LAPAASVLDLHGR 583
            E A+  +E  C    T+P  A   L  L  +  A  V++ +LE S   +AQFHA   LQ A+L RW  +P  +R A + YL   L     R    V SQ L+TF V W+RGW+ E  + K   F  +Q      +    GG A+ +  K       L +LV EFS+ ++ ALGLPLEF R  H AF   GL   L + M +L   V+   VA P +            +D    L  +  +V +C E LSW+F   +  Q P  +    I P   WR YL+R D L  + +VY R+R        G L H LRQLL QL+S+ G +F   ++R  YA FL+      L+    +A   +  +++    +     E    E  G  S     VSNF+L  L     F    Q L+A++  +L  +  +A+  R  ++D       GW    F  L+E W  +  D  + G                                    GE    R+ + +A  P+Y  Y    +T+S+VEA  S+  + ++E E I  A+ +EQ+ + A LGR  LA A + +D+  R
Sbjct:    9 EEAVVWMESLCRAFPTNPKEAEVALTELHRSDHAAEVSKIILERSQMPMAQFHALLALQEAVLARWDSVPPADRRALKGYLWEFLCREWARLERSVVSQALRTFCVFWRRGWSAETEEAKLSLFALLQ------QGASEGGAAALRSAKA------LFSLVSEFSSTRATALGLPLEFFRATHAAFNKLGLDQSLALSMELLGETVKA--VATPEA-----------LSDT-SVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQ--LIRPGPRWRAYLVRPDFLGAVFNVYHRVRLRGTAGPGGTLPHALRQLLLQLSSVHGDIFENDDQRKAYASFLVEGAAAVLAAPFSSAGVRQEGVHQ--GAAEAAAEEAQADEYIGIASMAVRLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHES--KALAGRDDDED------VGWRRETFALLLEAWVAMAEDFEVTG------------------------------------GENQGMRKGMQDATFPLYEQYLEHELTVSRVEAEASVGHEEDDEEEEIGAADKDEQMCSAACLGRLSLARALAAVDVQVR 519          
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|695395990|ref|XP_009521321.1| (hypothetical protein PHYSODRAFT_486369 [Phytophthora sojae] >gi|348686218|gb|EGZ26033.1| hypothetical protein PHYSODRAFT_486369 [Phytophthora sojae])

HSP 1 Score: 146.747 bits (369), Expect = 4.477e-33
Identity = 146/536 (27.24%), Postives = 225/536 (41.98%), Query Frame = 0
Query:   25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPL-------------QEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538
            +L   + +P AL  A  +L  + T  V QFH    ++   L RW  L L +++ A  +L  LLL  G     FV++  LQT  +L KRGW +     +    QQ+  +      + G   A R     +LA+ +LLA V EFS+A  A+ +  P+EFH ++ +  E   GL   + + + +L   +  T  A   +G AG      L          L+A  QLC+E L+W F   DP               + S   P  ++P  +WRP L+R DL+    + Y   R ++ +  E  LHL RQ L QLASLQGP+F    E+ Q+   + R  V  +                     A+ +  GY    RE+      +   V+N  L  L    +   F    + L+++T  LL     R    R   +    A +E W +   + L++ W  L+ DP +  E G  G + P                         E E A+A  ++++A APV   Y   ++ L  VEA
Sbjct:   30 VLEHFKRSPSALADAMALLRDAQTPQVVQFHCVATIREVTLQRWPLLALADKSQALDFLMQLLLERGAALPRFVAASALQTAVLLVKRGWLDRLESERAAVLQQMGVML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMSQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGAAGNVPAEQLEL--------LDAAFQLCVELLNWQFE--DPRAGNLTWSLSASANDDDSGNRPV-LTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFLGEIFRGVVTVVHNPF-------------LDLVAQSDFTGYELATRELIDCCQLLFRLVNNIGLEALLQANSGQLFSSFIEELASLTSKLLHSALDRI--QRHLREHPNEAIDELWELEGVDILLDAWVALINDPQLL-EVGAPGTSKP-------------------------EAEQALA--LLSKASAPVLELYLQVQLELCAVEA 500          
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|568008615|gb|ETL82832.1| (hypothetical protein L917_17080, partial [Phytophthora parasitica])

HSP 1 Score: 145.976 bits (367), Expect = 6.895e-33
Identity = 147/535 (27.48%), Postives = 227/535 (42.43%), Query Frame = 0
Query:   25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538
            +L   + +P ALG A  +L  + T  V QFH    ++   L RW  L L +++ A  +L  LLL  G     FV++  LQT  +L KRGW +     +T   QQ+ A+      + G   A R     +LA+ +LLA V EFS+A  A+ +  P+EFH ++ +  E   GL   + + + +L   +  T  A   +G AG      L          L+A  +LC+E L+W F   DP              +        ++P  +WRP L+R DL+    + Y   R ++ +  E  LHL RQ L QLASLQGP+F    E+ Q+   + R GV      V    +    L       A+ ++ GY    RE+      +   V+N  L  L    +   F    + L+++T  LL     R   +   N +   A +E W +   + L++ W  L  DP +   G  +                              E E A+A  +++EA APV   Y   ++ L  VEA
Sbjct:   42 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDHLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFR-GV------VTVVHNPFLDLL------AQSDITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 511          
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|567950460|gb|ETK76171.1| (hypothetical protein L915_17353, partial [Phytophthora parasitica] >gi|567979128|gb|ETL29610.1| hypothetical protein L916_17246, partial [Phytophthora parasitica] >gi|568038541|gb|ETM36068.1| hypothetical protein L914_17151, partial [Phytophthora parasitica])

HSP 1 Score: 145.976 bits (367), Expect = 7.214e-33
Identity = 147/535 (27.48%), Postives = 227/535 (42.43%), Query Frame = 0
Query:   25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538
            +L   + +P ALG A  +L  + T  V QFH    ++   L RW  L L +++ A  +L  LLL  G     FV++  LQT  +L KRGW +     +T   QQ+ A+      + G   A R     +LA+ +LLA V EFS+A  A+ +  P+EFH ++ +  E   GL   + + + +L   +  T  A   +G AG      L          L+A  +LC+E L+W F   DP              +        ++P  +WRP L+R DL+    + Y   R ++ +  E  LHL RQ L QLASLQGP+F    E+ Q+   + R GV      V    +    L       A+ ++ GY    RE+      +   V+N  L  L    +   F    + L+++T  LL     R   +   N +   A +E W +   + L++ W  L  DP +   G  +                              E E A+A  +++EA APV   Y   ++ L  VEA
Sbjct:   42 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDRLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFR-GV------VTVVHNPFLDLL------AQSDITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 511          
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|675174911|ref|XP_008896340.1| (hypothetical protein PPTG_04224 [Phytophthora parasitica INRA-310] >gi|566013020|gb|ETI35931.1| hypothetical protein F443_17827 [Phytophthora parasitica P1569] >gi|568104049|gb|ETN18706.1| hypothetical protein PPTG_04224 [Phytophthora parasitica INRA-310] >gi|570316706|gb|ETO64654.1| hypothetical protein F444_17864 [Phytophthora parasitica P1976] >gi|570940497|gb|ETP05754.1| hypothetical protein F441_17701 [Phytophthora parasitica CJ01A1] >gi|570970747|gb|ETP33866.1| hypothetical protein F442_17682 [Phytophthora parasitica P10297])

HSP 1 Score: 145.976 bits (367), Expect = 7.707e-33
Identity = 147/535 (27.48%), Postives = 227/535 (42.43%), Query Frame = 0
Query:   25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538
            +L   + +P ALG A  +L  + T  V QFH    ++   L RW  L L +++ A  +L  LLL  G     FV++  LQT  +L KRGW +     +T   QQ+ A+      + G   A R     +LA+ +LLA V EFS+A  A+ +  P+EFH ++ +  E   GL   + + + +L   +  T  A   +G AG      L          L+A  +LC+E L+W F   DP              +        ++P  +WRP L+R DL+    + Y   R ++ +  E  LHL RQ L QLASLQGP+F    E+ Q+   + R GV      V    +    L       A+ ++ GY    RE+      +   V+N  L  L    +   F    + L+++T  LL     R   +   N +   A +E W +   + L++ W  L  DP +   G  +                              E E A+A  +++EA APV   Y   ++ L  VEA
Sbjct:   30 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDRLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFR-GV------VTVVHNPFLDLL------AQSDITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 499          
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|970642311|gb|KUF84023.1| (Exportin-4 [Phytophthora nicotianae])

HSP 1 Score: 145.591 bits (366), Expect = 8.232e-33
Identity = 147/535 (27.48%), Postives = 227/535 (42.43%), Query Frame = 0
Query:   25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538
            +L   + +P ALG A  +L  + T  V QFH    ++   L RW  L L +++ A  +L  LLL  G     FV++  LQT  +L KRGW +     +T   QQ+ A+      + G   A R     +LA+ +LLA V EFS+A  A+ +  P+EFH ++ +  E   GL   + + + +L   +  T  A   +G AG      L          L+A  +LC+E L+W F   DP              +        ++P  +WRP L+R DL+    + Y   R ++ +  E  LHL RQ L QLASLQGP+F    E+ Q+   + R GV      V    +    L       A+ ++ GY    RE+      +   V+N  L  L    +   F    + L+++T  LL     R   +   N +   A +E W +   + L++ W  L  DP +   G  +                              E E A+A  +++EA APV   Y   ++ L  VEA
Sbjct:   30 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDRLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFR-GV------VTVVHNPFLDLL------AQSDITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 499          
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|970629605|gb|KUF76819.1| (Exportin-4 [Phytophthora nicotianae])

HSP 1 Score: 145.591 bits (366), Expect = 8.771e-33
Identity = 148/543 (27.26%), Postives = 227/543 (41.80%), Query Frame = 0
Query:   25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLR--VGV------DFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538
            +L   + +P ALG A  +L  + T  V QFH    ++   L RW  L L +++ A  +L  LLL  G     FV++  LQT  +L KRGW +     +T   QQ+ A+      + G   A R     +LA+ +LLA V EFS+A  A+ +  P+EFH ++ +  E   GL   + + + +L   +  T  A   +G AG      L          L+A  +LC+E L+W F   DP              +        ++P  +WRP L+R DL+    + Y   R ++ +  E  LHL RQ L QLASLQGP+F    E+ Q+   + R  V V      D L+QS                     ++ GY    RE+      +   V+N  L  L    +   F    + L+++T  LL     R   +   N +   A +E W +   + L++ W  L  DP +   G  +                              E E A+A  +++EA APV   Y   ++ L  VEA
Sbjct:   30 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDRLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFRGIVTVVHNPFLDLLAQS---------------------DITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 499          
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|301112166|ref|XP_002905162.1| (exportin-4, putative [Phytophthora infestans T30-4] >gi|262095492|gb|EEY53544.1| exportin-4, putative [Phytophthora infestans T30-4])

HSP 1 Score: 134.42 bits (337), Expect = 4.097e-29
Identity = 146/538 (27.14%), Postives = 226/538 (42.01%), Query Frame = 0
Query:   22 ASEILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPL-------------QEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVE 537
            A  +L   + +P AL  A  +L  S T  V QFH    ++   L RW  L L +++ A  +L  LLL  G     FV++  LQT  +L KRGW +     ++   QQ+  +      + G   A R     +LA+ +LLA V EFS+A  A+ +  P+EFH ++ +  E   GL   + + + +L   +  T  A   +G AG      L          L++  +LC+E L+W F   DP               + +   P  + P  +WRP L+R DL+    + Y   R ++ +  E  LHL RQ L QLASLQGP+F    E+ Q+   + R GV      V    +    L       A  ++ GY    RE+      +   V+N  L  L   ++          L+++T  LL     R   +   N +   A +E W +   + L++ W  L  DP +  E G S    P                         E E A+A  ++++A APV   Y   ++ L  VE
Sbjct:   27 AESVLEHFKRSPSALNDAMSLLRDSQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAAAPRFVAAAALQTAVLLVKRGWLDRLESERSAVLQQMGTML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKDIVALAVPLLEDSIRSTTTACGDAGAAGDVPAEQLEL--------LDSAFRLCVELLNWQFE--DPRVGNLTWSLTVSASDDDTGNRPVLV-PQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFLGEIFR-GV------VTVVHNPFLDLL------AHSDITGYELATRELIDCCQLLFRLVNNIGLTALLQASSGQLLSSFIDELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLL-EVGVSKTAKP-------------------------EAEQALA--LLSKASAPVVELYLQVQLELCAVE 499          
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|953495277|emb|CEG43184.1| (xpo4_danre ame: full=exportin-4 [Plasmopara halstedii])

HSP 1 Score: 128.642 bits (322), Expect = 2.663e-27
Identity = 109/465 (23.44%), Postives = 195/465 (41.94%), Query Frame = 0
Query:   21 RASEILLALRSNPEALGVARHVLEH-STNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDYG-LLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGF----------DPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFP---FFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAG 469
            +A   L   + N +AL  +   L++  T  + QFH    ++   L RW++L L +++    ++  LLL+       FV++  LQT  +L KRGW +     +    QQ+ A+           +  +     +LA+ + L+ V EFS+A  A+ +  P+EFH ++ +  E  G L   + + + +L   +  T  A   +G  G      +          L+   QLC E L+W                   E  +     ++P  +WRP ++R +L+    + Y   R ++ +  E  LHL RQ L QLAS+QGP+F   +E+ Q+   + R GV          +      ++    +     +   +E+      +    +N  L  L        FP   + L+++TC LL     R   +   + + T    E W +   + L++ W  LV DP++  
Sbjct:   26 QAENFLTKFKQNSDALSDSITFLQNRQTPPIVQFHCVATIREVTLQRWSQLALSDKSQVLDFIMQLLLDRYAELPKFVAATALQTAVLLVKRGWLDRLESERVAVLQQLGAML----------QPDKATTHRLLAAKWFLSFVNEFSSASRASNMMQPIEFHTRSRRMLEKSGELKDIVALAVSLLEDSIRSTTTACGVAGSTGNIPAEQIEL--------LDTAFQLCGELLNWQHEDLREGNLTWSLSTTTDESDISNRPTLTPQASWRPIIVRPELIHSAFNTYAFFRTVAAK-NETLLHLARQFLIQLASIQGPIFEDRKEQVQFLAEIFR-GV---------TTVVHDPFFDLVAKNDSIGCQMATQELVDCCQILLRLANNIGLDALLQVSSGQLFPSFIEELASLTCKLLHSALERTKCHLHEHPNDTIG--ELWELEGVDILLDAWIALVNDPLLTD 459          
The following BLAST results are available for this feature:
BLAST of EWM29980.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112587|gb|EWM29980.1|0.000e+0100.00Importin-beta [Nannochloropsis gaditana][more]
gi|298710876|emb|CBJ26385.1|2.527e-4630.09conserved unknown protein [Ectocarpus siliculosus][more]
gi|695395990|ref|XP_009521321.1|4.477e-3327.24hypothetical protein PHYSODRAFT_486369 [Phytophtho... [more]
gi|568008615|gb|ETL82832.1|6.895e-3327.48hypothetical protein L917_17080, partial [Phytopht... [more]
gi|567950460|gb|ETK76171.1|7.214e-3327.48hypothetical protein L915_17353, partial [Phytopht... [more]
gi|675174911|ref|XP_008896340.1|7.707e-3327.48hypothetical protein PPTG_04224 [Phytophthora para... [more]
gi|970642311|gb|KUF84023.1|8.232e-3327.48Exportin-4 [Phytophthora nicotianae][more]
gi|970629605|gb|KUF76819.1|8.771e-3327.26Exportin-4 [Phytophthora nicotianae][more]
gi|301112166|ref|XP_002905162.1|4.097e-2927.14exportin-4, putative [Phytophthora infestans T30-4... [more]
gi|953495277|emb|CEG43184.1|2.663e-2723.44xpo4_danre ame: full=exportin-4 [Plasmopara halste... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna692rna692Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications