rna692, rna692 (mRNA) Nannochloropsis gaditana

Overview
Namerna692
Unique Namerna692
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length330
Alignment locationCM002456.1:171592..173529 -

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Properties
Property NameValue
ProductImportin-beta
Orig transcript idgnl|cribi|Naga_101042g2.10360.mrna
Orig protein idgnl|cribi|Naga_101042g2.10360
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:171592..173529 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101042g2gene663Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29980.1cds692Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna692rna692-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna692 ID=rna692|Name=rna692|organism=Nannochloropsis gaditana|type=mRNA|length=330bp
ATGGAAGATGAAGGAAACCCGACGCTGGATCCTTCCCCGCCCCAAAAACT
GCATCGTGTGCCCTCCCTCGTGCTCCCAGAGGAGGCTATCTTCGGCACCT
CTACGGCAGCTCCGTGTCTGGAATGTCGTGATTATCACGAGCGGCATCAC
AAAGTGACCTTGCAAAGTCCTAGCCAGGCTGGACAAGTCAAATCAGACGG
CGAACATTTCTCCTTCTTGACGGGAACAGGCCGGGAGGGCGAGGCGGACA
AGACCCCGCGGACGGAGGAGAGCGGGAGCGAGGAAGCGCCCAAGTTGCTC
CTGTCTCAGTCTCTCCTCGCCCCCTCGTGA
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protein sequence of rna692

>rna692-protein ID=rna692-protein|Name=rna692|organism=Nannochloropsis gaditana|type=polypeptide|length=602bp
MEAALAHIEHACELLQTDPMRASEILLALRSNPEALGVARHVLEHSTNAV
AQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQ
LLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNK
VVLASAFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGM
GMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETL
SWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGL
SVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQ
SVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVL
AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAA
FETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGG
NGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEAARSLEEDAEEEA
EAIATANVEEQVVNMAGLGRLAPAASVLDLHGRLLAPLGGTDNGGGAPRP
GV
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mRNA from alignment at CM002456.1:171592..173529-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna692 ID=rna692|Name=rna692|organism=Nannochloropsis gaditana|type=mRNA|length=1938bp|location=Sequence derived from alignment at CM002456.1:171592..173529- (Nannochloropsis gaditana)
GCGCAGGAGTGTTTAACGGGCTTGATCGTCGCTGTTGTTTTCCTTGCAGC
ACGAGCGCCGCTCAGAGAGCGGCTCTAACCTCTACCCTGCACAGGAAGTT
ATTGTGTGACCACCTACACCAACCTTCCTATGGAAGCTGCACTCGCACAC
ATCGAGCATGCCTGTGAGCTGTTGCAGACGGATCCGATGAGAGCCTCGGA
AATCCTCCTTGCTCTACGCAGTAATCCGGAGGCTTTGGGTGTAGCCAGGC
ATGTCCTCGAGCACTCCACCAACGCCGTCGCACAATTTCATGCCACGGGC
CTTTTACAGGCAGCCTTACTTGGCCGGTGGACTGAATTGCCTTTGGAAGA
GCGTGCGGCCGCACGAAGTTACCTGGCTACCCTCCTCTTAAACCACGGAG
AGCGCTACTCCCATTTCGTAAGCTCTCAGCTCCTGCAAACATTTGCTGTT
CTTTGGAAACGGGGGTGGGCCGAAGAAGGACCCGATGGGAAGACACACTT
TTTCCAGCAAGTACAAGCCCTGACGCATGCGCCTGAGGAGAAGGATGGCG
GCGGGGAGGCTTCACGGAAAAAAAATAAAGTGGTGTTGGCCAGTGCGTTC
TTGCTCGCGTTGGTTGGGGAGTTCAGCACCGCCAAATCGGCCGCGCTGGG
GCTTCCTTTGGAGTTTCATAGGCAGGCACATAAGGCTTTCGAAGACTACG
GCCTCTTGCCCTGCTTGGAAATCGGGATGGGCATGCTGGCGCGTGGGGTC
GAGGAGACCTTGGTGGCCCTCCCCCCGAGCGGGCAAGCGGGAAGGGAGGG
GGGAAGCGGGTTGACAGCTGACGCCCATGGATGCCTACTGAGGTTGAATG
CGATTGTCCAGTTGTGCTTGGAGACGCTATCGTGGGATTTTACCGGCTTT
GACCCCTTGCAAGAGCCTTCCATGAAGACGCCCTGCTTCATCTCCCCCCC
GATAGCCTGGCGCCCGTACTTGCTGCGGCTGGACCTTCTGGAAGGTCTCG
TCAGCGTCTACACCCGCCTGCGGGGCCTCTCTGTCCAGGAAGGGGAAGGC
CGCTTGCATTTGTTGCGACAACTTCTGACCCAGCTGGCATCCCTGCAAGG
ACCGGTCTTCCCGACAGGAGAGGAACGATCCCAGTACGCGCTCTTCCTCC
TCCGCGTGGGCGTGGATTTCCTGTCCCAGAGCGTGGAAGCCGCCTCGTCC
GCGGAAGCAGCCCTTTACGAAAGGAGACAGGGGTCAGCCGAGGACGAGGT
GGAAGGCTACGGTCGAGAGGTGGATGGATGGGTCAGCTTCGTCCACGTCT
GCGTGAGCAATTTCCGCTTGCCTGTCTTGGCGGCTTTCCCATTCTTCCCG
GACCTCTGCCAGCGCTTGAGTGCGGTGACCTGCCTCTTGTTGCGGGTCAC
TGCGGGACGCGCAGTGAACTACCGGGGCTCCAACCAGGACTGGACAGCGG
CGTGCGAAGAAGGATGGGCGATGGCGGCGTTCGAGACGTTGATCGAGACG
TGGGGTGTGTTGGTCGCCGACCCCATGATCGCCGGGGAAGGTGGCGGCAG
CGGGGGCACCTCCCCGGTGGGACCGATGGGGATGGAGGGAGGAGGAGGGG
GGGTGGAGGGGGGAGGAGGGAAGGGAGGGAATGGGGGGAGGGAGGGGGAG
GGGGCCATGGCCCGGCGGGTGGTGACCGAGGCCGTCGCACCTGTCTACCA
CGCGTACCAAAGCTGCCGTGTCACCCTTTCCCAAGTGGAAGCGGCACGTT
CGTTGGAGGAGGACGCCGAGGAAGAGGCAGAAGCCATTGCCACCGCCAAC
GTGGAAGAGCAAGTAGTGAACATGGCGGGATTGGGGCGCTTGGCCCCTGC
GGCCTCTGTCCTGGATTTGCACGGGCGGTTGCTCGCTCCCTTGGGGGGTA
CCGACAACGGGGGGGGGGCACCCAGGCCGGGTGTTTGA
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Coding sequence (CDS) from alignment at CM002456.1:171592..173529-

>rna692 ID=rna692|Name=rna692|organism=Nannochloropsis gaditana|type=CDS|length=1809bp|location=Sequence derived from alignment at CM002456.1:171592..173529- (Nannochloropsis gaditana)
ATGGAAGCTGCACTCGCACACATCGAGCATGCCTGTGAGCTGTTGCAGAC
GGATCCGATGAGAGCCTCGGAAATCCTCCTTGCTCTACGCAGTAATCCGG
AGGCTTTGGGTGTAGCCAGGCATGTCCTCGAGCACTCCACCAACGCCGTC
GCACAATTTCATGCCACGGGCCTTTTACAGGCAGCCTTACTTGGCCGGTG
GACTGAATTGCCTTTGGAAGAGCGTGCGGCCGCACGAAGTTACCTGGCTA
CCCTCCTCTTAAACCACGGAGAGCGCTACTCCCATTTCGTAAGCTCTCAG
CTCCTGCAAACATTTGCTGTTCTTTGGAAACGGGGGTGGGCCGAAGAAGG
ACCCGATGGGAAGACACACTTTTTCCAGCAAGTACAAGCCCTGACGCATG
CGCCTGAGGAGAAGGATGGCGGCGGGGAGGCTTCACGGAAAAAAAATAAA
GTGGTGTTGGCCAGTGCGTTCTTGCTCGCGTTGGTTGGGGAGTTCAGCAC
CGCCAAATCGGCCGCGCTGGGGCTTCCTTTGGAGTTTCATAGGCAGGCAC
ATAAGGCTTTCGAAGACTACGGCCTCTTGCCCTGCTTGGAAATCGGGATG
GGCATGCTGGCGCGTGGGGTCGAGGAGACCTTGGTGGCCCTCCCCCCGAG
CGGGCAAGCGGGAAGGGAGGGGGGAAGCGGGTTGACAGCTGACGCCCATG
GATGCCTACTGAGGTTGAATGCGATTGTCCAGTTGTGCTTGGAGACGCTA
TCGTGGGATTTTACCGGCTTTGACCCCTTGCAAGAGCCTTCCATGAAGAC
GCCCTGCTTCATCTCCCCCCCGATAGCCTGGCGCCCGTACTTGCTGCGGC
TGGACCTTCTGGAAGGTCTCGTCAGCGTCTACACCCGCCTGCGGGGCCTC
TCTGTCCAGGAAGGGGAAGGCCGCTTGCATTTGTTGCGACAACTTCTGAC
CCAGCTGGCATCCCTGCAAGGACCGGTCTTCCCGACAGGAGAGGAACGAT
CCCAGTACGCGCTCTTCCTCCTCCGCGTGGGCGTGGATTTCCTGTCCCAG
AGCGTGGAAGCCGCCTCGTCCGCGGAAGCAGCCCTTTACGAAAGGAGACA
GGGGTCAGCCGAGGACGAGGTGGAAGGCTACGGTCGAGAGGTGGATGGAT
GGGTCAGCTTCGTCCACGTCTGCGTGAGCAATTTCCGCTTGCCTGTCTTG
GCGGCTTTCCCATTCTTCCCGGACCTCTGCCAGCGCTTGAGTGCGGTGAC
CTGCCTCTTGTTGCGGGTCACTGCGGGACGCGCAGTGAACTACCGGGGCT
CCAACCAGGACTGGACAGCGGCGTGCGAAGAAGGATGGGCGATGGCGGCG
TTCGAGACGTTGATCGAGACGTGGGGTGTGTTGGTCGCCGACCCCATGAT
CGCCGGGGAAGGTGGCGGCAGCGGGGGCACCTCCCCGGTGGGACCGATGG
GGATGGAGGGAGGAGGAGGGGGGGTGGAGGGGGGAGGAGGGAAGGGAGGG
AATGGGGGGAGGGAGGGGGAGGGGGCCATGGCCCGGCGGGTGGTGACCGA
GGCCGTCGCACCTGTCTACCACGCGTACCAAAGCTGCCGTGTCACCCTTT
CCCAAGTGGAAGCGGCACGTTCGTTGGAGGAGGACGCCGAGGAAGAGGCA
GAAGCCATTGCCACCGCCAACGTGGAAGAGCAAGTAGTGAACATGGCGGG
ATTGGGGCGCTTGGCCCCTGCGGCCTCTGTCCTGGATTTGCACGGGCGGT
TGCTCGCTCCCTTGGGGGGTACCGACAACGGGGGGGGGGCACCCAGGCCG
GGTGTTTGA
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Synonyms
Publications