EWM29980.1, cds692 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|585112587|gb|EWM29980.1| (Importin-beta [Nannochloropsis gaditana]) HSP 1 Score: 1206.43 bits (3120), Expect = 0.000e+0 Identity = 602/602 (100.00%), Postives = 602/602 (100.00%), Query Frame = 0 Query: 1 MEAALAHIEHACELLQTDPMRASEILLALRSNPEALGVARHVLEHSTNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEAARSLEEDAEEEAEAIATANVEEQVVNMAGLGRLAPAASVLDLHGRLLAPLGGTDNGGGAPRPGV 602 MEAALAHIEHACELLQTDPMRASEILLALRSNPEALGVARHVLEHSTNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEAARSLEEDAEEEAEAIATANVEEQVVNMAGLGRLAPAASVLDLHGRLLAPLGGTDNGGGAPRPGV Sbjct: 1 MEAALAHIEHACELLQTDPMRASEILLALRSNPEALGVARHVLEHSTNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEAARSLEEDAEEEAEAIATANVEEQVVNMAGLGRLAPAASVLDLHGRLLAPLGGTDNGGGAPRPGV 602
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|298710876|emb|CBJ26385.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 185.652 bits (470), Expect = 2.527e-46 Identity = 176/585 (30.09%), Postives = 259/585 (44.27%), Query Frame = 0 Query: 2 EAALAHIEHACELLQTDPMRASEILLALRSNPEALGVARHVLEHSTNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRL-HLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEAARSLEEDAEEEAEAIATANVEEQVVNMAGLGR--LAPAASVLDLHGR 583 E A+ +E C T+P A L L + A V++ +LE S +AQFHA LQ A+L RW +P +R A + YL L R V SQ L+TF V W+RGW+ E + K F +Q + GG A+ + K L +LV EFS+ ++ ALGLPLEF R H AF GL L + M +L V+ VA P + +D L + +V +C E LSW+F + Q P + I P WR YL+R D L + +VY R+R G L H LRQLL QL+S+ G +F ++R YA FL+ L+ +A + +++ + E E G S VSNF+L L F Q L+A++ +L + +A+ R ++D GW F L+E W + D + G GE R+ + +A P+Y Y +T+S+VEA S+ + ++E E I A+ +EQ+ + A LGR LA A + +D+ R Sbjct: 9 EEAVVWMESLCRAFPTNPKEAEVALTELHRSDHAAEVSKIILERSQMPMAQFHALLALQEAVLARWDSVPPADRRALKGYLWEFLCREWARLERSVVSQALRTFCVFWRRGWSAETEEAKLSLFALLQ------QGASEGGAAALRSAKA------LFSLVSEFSSTRATALGLPLEFFRATHAAFNKLGLDQSLALSMELLGETVKA--VATPEA-----------LSDT-SVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQ--LIRPGPRWRAYLVRPDFLGAVFNVYHRVRLRGTAGPGGTLPHALRQLLLQLSSVHGDIFENDDQRKAYASFLVEGAAAVLAAPFSSAGVRQEGVHQ--GAAEAAAEEAQADEYIGIASMAVRLVSNFKLSTLGQLDSFAAFAQHLAALSSRMLHES--KALAGRDDDED------VGWRRETFALLLEAWVAMAEDFEVTG------------------------------------GENQGMRKGMQDATFPLYEQYLEHELTVSRVEAEASVGHEEDDEEEEIGAADKDEQMCSAACLGRLSLARALAAVDVQVR 519
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|695395990|ref|XP_009521321.1| (hypothetical protein PHYSODRAFT_486369 [Phytophthora sojae] >gi|348686218|gb|EGZ26033.1| hypothetical protein PHYSODRAFT_486369 [Phytophthora sojae]) HSP 1 Score: 146.747 bits (369), Expect = 4.477e-33 Identity = 146/536 (27.24%), Postives = 225/536 (41.98%), Query Frame = 0 Query: 25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPL-------------QEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538 +L + +P AL A +L + T V QFH ++ L RW L L +++ A +L LLL G FV++ LQT +L KRGW + + QQ+ + + G A R +LA+ +LLA V EFS+A A+ + P+EFH ++ + E GL + + + +L + T A +G AG L L+A QLC+E L+W F DP + S P ++P +WRP L+R DL+ + Y R ++ + E LHL RQ L QLASLQGP+F E+ Q+ + R V + A+ + GY RE+ + V+N L L + F + L+++T LL R R + A +E W + + L++ W L+ DP + E G G + P E E A+A ++++A APV Y ++ L VEA Sbjct: 30 VLEHFKRSPSALADAMALLRDAQTPQVVQFHCVATIREVTLQRWPLLALADKSQALDFLMQLLLERGAALPRFVAASALQTAVLLVKRGWLDRLESERAAVLQQMGVML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMSQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGAAGNVPAEQLEL--------LDAAFQLCVELLNWQFE--DPRAGNLTWSLSASANDDDSGNRPV-LTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFLGEIFRGVVTVVHNPF-------------LDLVAQSDFTGYELATRELIDCCQLLFRLVNNIGLEALLQANSGQLFSSFIEELASLTSKLLHSALDRI--QRHLREHPNEAIDELWELEGVDILLDAWVALINDPQLL-EVGAPGTSKP-------------------------EAEQALA--LLSKASAPVLELYLQVQLELCAVEA 500
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|568008615|gb|ETL82832.1| (hypothetical protein L917_17080, partial [Phytophthora parasitica]) HSP 1 Score: 145.976 bits (367), Expect = 6.895e-33 Identity = 147/535 (27.48%), Postives = 227/535 (42.43%), Query Frame = 0 Query: 25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538 +L + +P ALG A +L + T V QFH ++ L RW L L +++ A +L LLL G FV++ LQT +L KRGW + +T QQ+ A+ + G A R +LA+ +LLA V EFS+A A+ + P+EFH ++ + E GL + + + +L + T A +G AG L L+A +LC+E L+W F DP + ++P +WRP L+R DL+ + Y R ++ + E LHL RQ L QLASLQGP+F E+ Q+ + R GV V + L A+ ++ GY RE+ + V+N L L + F + L+++T LL R + N + A +E W + + L++ W L DP + G + E E A+A +++EA APV Y ++ L VEA Sbjct: 42 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDHLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFR-GV------VTVVHNPFLDLL------AQSDITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 511
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|567950460|gb|ETK76171.1| (hypothetical protein L915_17353, partial [Phytophthora parasitica] >gi|567979128|gb|ETL29610.1| hypothetical protein L916_17246, partial [Phytophthora parasitica] >gi|568038541|gb|ETM36068.1| hypothetical protein L914_17151, partial [Phytophthora parasitica]) HSP 1 Score: 145.976 bits (367), Expect = 7.214e-33 Identity = 147/535 (27.48%), Postives = 227/535 (42.43%), Query Frame = 0 Query: 25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538 +L + +P ALG A +L + T V QFH ++ L RW L L +++ A +L LLL G FV++ LQT +L KRGW + +T QQ+ A+ + G A R +LA+ +LLA V EFS+A A+ + P+EFH ++ + E GL + + + +L + T A +G AG L L+A +LC+E L+W F DP + ++P +WRP L+R DL+ + Y R ++ + E LHL RQ L QLASLQGP+F E+ Q+ + R GV V + L A+ ++ GY RE+ + V+N L L + F + L+++T LL R + N + A +E W + + L++ W L DP + G + E E A+A +++EA APV Y ++ L VEA Sbjct: 42 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDRLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFR-GV------VTVVHNPFLDLL------AQSDITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 511
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|675174911|ref|XP_008896340.1| (hypothetical protein PPTG_04224 [Phytophthora parasitica INRA-310] >gi|566013020|gb|ETI35931.1| hypothetical protein F443_17827 [Phytophthora parasitica P1569] >gi|568104049|gb|ETN18706.1| hypothetical protein PPTG_04224 [Phytophthora parasitica INRA-310] >gi|570316706|gb|ETO64654.1| hypothetical protein F444_17864 [Phytophthora parasitica P1976] >gi|570940497|gb|ETP05754.1| hypothetical protein F441_17701 [Phytophthora parasitica CJ01A1] >gi|570970747|gb|ETP33866.1| hypothetical protein F442_17682 [Phytophthora parasitica P10297]) HSP 1 Score: 145.976 bits (367), Expect = 7.707e-33 Identity = 147/535 (27.48%), Postives = 227/535 (42.43%), Query Frame = 0 Query: 25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538 +L + +P ALG A +L + T V QFH ++ L RW L L +++ A +L LLL G FV++ LQT +L KRGW + +T QQ+ A+ + G A R +LA+ +LLA V EFS+A A+ + P+EFH ++ + E GL + + + +L + T A +G AG L L+A +LC+E L+W F DP + ++P +WRP L+R DL+ + Y R ++ + E LHL RQ L QLASLQGP+F E+ Q+ + R GV V + L A+ ++ GY RE+ + V+N L L + F + L+++T LL R + N + A +E W + + L++ W L DP + G + E E A+A +++EA APV Y ++ L VEA Sbjct: 30 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDRLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFR-GV------VTVVHNPFLDLL------AQSDITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 499
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|970642311|gb|KUF84023.1| (Exportin-4 [Phytophthora nicotianae]) HSP 1 Score: 145.591 bits (366), Expect = 8.232e-33 Identity = 147/535 (27.48%), Postives = 227/535 (42.43%), Query Frame = 0 Query: 25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538 +L + +P ALG A +L + T V QFH ++ L RW L L +++ A +L LLL G FV++ LQT +L KRGW + +T QQ+ A+ + G A R +LA+ +LLA V EFS+A A+ + P+EFH ++ + E GL + + + +L + T A +G AG L L+A +LC+E L+W F DP + ++P +WRP L+R DL+ + Y R ++ + E LHL RQ L QLASLQGP+F E+ Q+ + R GV V + L A+ ++ GY RE+ + V+N L L + F + L+++T LL R + N + A +E W + + L++ W L DP + G + E E A+A +++EA APV Y ++ L VEA Sbjct: 30 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDRLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFR-GV------VTVVHNPFLDLL------AQSDITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 499
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|970629605|gb|KUF76819.1| (Exportin-4 [Phytophthora nicotianae]) HSP 1 Score: 145.591 bits (366), Expect = 8.771e-33 Identity = 148/543 (27.26%), Postives = 227/543 (41.80%), Query Frame = 0 Query: 25 ILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDP------------LQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLR--VGV------DFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVEA 538 +L + +P ALG A +L + T V QFH ++ L RW L L +++ A +L LLL G FV++ LQT +L KRGW + +T QQ+ A+ + G A R +LA+ +LLA V EFS+A A+ + P+EFH ++ + E GL + + + +L + T A +G AG L L+A +LC+E L+W F DP + ++P +WRP L+R DL+ + Y R ++ + E LHL RQ L QLASLQGP+F E+ Q+ + R V V D L+QS ++ GY RE+ + V+N L L + F + L+++T LL R + N + A +E W + + L++ W L DP + G + E E A+A +++EA APV Y ++ L VEA Sbjct: 30 VLEHFKRSPSALGDAMTLLHDTQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAALPRFVAAAALQTAVLLVKRGWLDRLESERTAVLQQMGAML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKNIVALAVPLLEDSIRSTTTACGDAGSAGDVPVEQLEL--------LDAAFRLCVELLNWQFE--DPRVGNLTWSLSVSANDDDTGNRPVLTPQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFMGEIFRGIVTVVHNPFLDLLAQS---------------------DITGYELATRELIDCCQLLFRLVNNIGLTALLQANSGQLFSSFIEELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLLEVGVSTSKP---------------------------EAEQALA--LLSEASAPVVELYLQVQLELCAVEA 499
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|301112166|ref|XP_002905162.1| (exportin-4, putative [Phytophthora infestans T30-4] >gi|262095492|gb|EEY53544.1| exportin-4, putative [Phytophthora infestans T30-4]) HSP 1 Score: 134.42 bits (337), Expect = 4.097e-29 Identity = 146/538 (27.14%), Postives = 226/538 (42.01%), Query Frame = 0 Query: 22 ASEILLALRSNPEALGVARHVLEHS-TNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDY-GLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPL-------------QEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGY---GREVDGWVSFVHVCVSNFRLPVL---AAFPFFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAGEGGGSGGTSPVGPMGMEGGGGGVEGGGGKGGNGGREGEGAMARRVVTEAVAPVYHAYQSCRVTLSQVE 537 A +L + +P AL A +L S T V QFH ++ L RW L L +++ A +L LLL G FV++ LQT +L KRGW + ++ QQ+ + + G A R +LA+ +LLA V EFS+A A+ + P+EFH ++ + E GL + + + +L + T A +G AG L L++ +LC+E L+W F DP + + P + P +WRP L+R DL+ + Y R ++ + E LHL RQ L QLASLQGP+F E+ Q+ + R GV V + L A ++ GY RE+ + V+N L L ++ L+++T LL R + N + A +E W + + L++ W L DP + E G S P E E A+A ++++A APV Y ++ L VE Sbjct: 27 AESVLEHFKRSPSALNDAMSLLRDSQTPPVVQFHCVATIREVTLQRWPLLALPDKSQALDFLMQLLLERGAAAPRFVAAAALQTAVLLVKRGWLDRLESERSAVLQQMGTML-----QPGNAIAHR-----LLAAKWLLAFVTEFSSASRASNMMQPVEFHTKSRRTLEKSGGLKDIVALAVPLLEDSIRSTTTACGDAGAAGDVPAEQLEL--------LDSAFRLCVELLNWQFE--DPRVGNLTWSLTVSASDDDTGNRPVLV-PQASWRPILVRPDLIHSAFNTYAFFRNVAAK-NETLLHLARQFLIQLASLQGPIFERKTEQVQFLGEIFR-GV------VTVVHNPFLDLL------AHSDITGYELATRELIDCCQLLFRLVNNIGLTALLQASSGQLLSSFIDELASLTSKLLHSALERIQRHLRENPN--EAIDELWELEGVDILLDAWVALANDPQLL-EVGVSKTAKP-------------------------EAEQALA--LLSKASAPVVELYLQVQLELCAVE 499
BLAST of EWM29980.1 vs. NCBI_GenBank
Match: gi|953495277|emb|CEG43184.1| (xpo4_danre ame: full=exportin-4 [Plasmopara halstedii]) HSP 1 Score: 128.642 bits (322), Expect = 2.663e-27 Identity = 109/465 (23.44%), Postives = 195/465 (41.94%), Query Frame = 0 Query: 21 RASEILLALRSNPEALGVARHVLEH-STNAVAQFHATGLLQAALLGRWTELPLEERAAARSYLATLLLNHGERYSHFVSSQLLQTFAVLWKRGWAEEGPDGKTHFFQQVQALTHAPEEKDGGGEASRKKNKVVLASAFLLALVGEFSTAKSAA-LGLPLEFHRQAHKAFEDYG-LLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGF----------DPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRLRGLSVQEGEGRLHLLRQLLTQLASLQGPVFPTGEERSQYALFLLRVGVDFLSQSVEAASSAEAALYERRQGSAEDEVEGYGREVDGWVSFVHVCVSNFRLPVLAAFP---FFPDLCQRLSAVTCLLLRVTAGRAVNYRGSNQDWTAACEEGWAMAAFETLIETWGVLVADPMIAG 469 +A L + N +AL + L++ T + QFH ++ L RW++L L +++ ++ LLL+ FV++ LQT +L KRGW + + QQ+ A+ + + +LA+ + L+ V EFS+A A+ + P+EFH ++ + E G L + + + +L + T A +G G + L+ QLC E L+W E + ++P +WRP ++R +L+ + Y R ++ + E LHL RQ L QLAS+QGP+F +E+ Q+ + R GV + ++ + + +E+ + +N L L FP + L+++TC LL R + + + T E W + + L++ W LV DP++ Sbjct: 26 QAENFLTKFKQNSDALSDSITFLQNRQTPPIVQFHCVATIREVTLQRWSQLALSDKSQVLDFIMQLLLDRYAELPKFVAATALQTAVLLVKRGWLDRLESERVAVLQQLGAML----------QPDKATTHRLLAAKWFLSFVNEFSSASRASNMMQPIEFHTRSRRMLEKSGELKDIVALAVSLLEDSIRSTTTACGVAGSTGNIPAEQIEL--------LDTAFQLCGELLNWQHEDLREGNLTWSLSTTTDESDISNRPTLTPQASWRPIIVRPELIHSAFNTYAFFRTVAAK-NETLLHLARQFLIQLASIQGPIFEDRKEQVQFLAEIFR-GV---------TTVVHDPFFDLVAKNDSIGCQMATQELVDCCQILLRLANNIGLDALLQVSSGQLFPSFIEELASLTCKLLHSALERTKCHLHEHPNDTIG--ELWELEGVDILLDAWIALVNDPLLTD 459 The following BLAST results are available for this feature:
BLAST of EWM29980.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|