EWM30010.1, cds663 (CDS) Nannochloropsis gaditana

Overview
NameEWM30010.1
Unique Namecds663
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:105950..106318 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30010.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101878g1.1196.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:105950..106318 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0065009regulation of molecular function
GO:0007049cell cycle
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
[Close]
BLAST of EWM30010.1 vs. NCBI_GenBank
Match: gi|585112629|gb|EWM30010.1| (hypothetical protein Naga_101878g1 [Nannochloropsis gaditana])

HSP 1 Score: 248.054 bits (632), Expect = 2.679e-83
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 MSSRISPYPSCFATLPPSPLQMFIAPSTYASTYFELCSLMPSDAEIRRQLHRMIELAGATVRVTVLRKEGGEGGRERGGGGGGGVGGGGNGGKGCHHHHTAEVLDDGEGRRNPMMFMERLHA 122
            MSSRISPYPSCFATLPPSPLQMFIAPSTYASTYFELCSLMPSDAEIRRQLHRMIELAGATVRVTVLRKEGGEGGRERGGGGGGGVGGGGNGGKGCHHHHTAEVLDDGEGRRNPMMFMERLHA
Sbjct:    1 MSSRISPYPSCFATLPPSPLQMFIAPSTYASTYFELCSLMPSDAEIRRQLHRMIELAGATVRVTVLRKEGGEGGRERGGGGGGGVGGGGNGGKGCHHHHTAEVLDDGEGRRNPMMFMERLHA 122
[Close]
BLAST of EWM30010.1 vs. NCBI_GenBank
Match: gi|553186656|ref|XP_005854462.1| (hypothetical protein NGA_0233900 [Nannochloropsis gaditana CCMP526] >gi|422294595|gb|EKU21895.1| hypothetical protein NGA_0233900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 87.4261 bits (215), Expect = 7.407e-20
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0 
Query:   21 QMFIAPSTYASTYFELCSLMPSDAEIRRQLHRMIELAGAT 60
            QMFIAPSTYASTYFELCSLMPSDAEIRRQLHRMIELAGAT
Sbjct:   84 QMFIAPSTYASTYFELCSLMPSDAEIRRQLHRMIELAGAT 123
The following BLAST results are available for this feature:
BLAST of EWM30010.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585112629|gb|EWM30010.1|2.679e-83100.00hypothetical protein Naga_101878g1 [Nannochloropsi... [more]
gi|553186656|ref|XP_005854462.1|7.407e-20100.00hypothetical protein NGA_0233900 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna663rna663Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications