EWM30025.1, cds642 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|585112651|gb|EWM30025.1| (cation-transporting atpase [Nannochloropsis gaditana]) HSP 1 Score: 505.368 bits (1300), Expect = 0.000e+0 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0 Query: 1 MFFFSFPATTLLTWGAAGLIGVLLLADGLYSALAPVPLHSSLFYNKHMVFGLILAGVLLILISLPPLHSYFRESNVGGKRSLPPLAPLPPQFAEVVARAGEGGGEQSRQGSAHPTLPLLSLDAAIHILGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVLR 255 MFFFSFPATTLLTWGAAGLIGVLLLADGLYSALAPVPLHSSLFYNKHMVFGLILAGVLLILISLPPLHSYFRESNVGGKRSLPPLAPLPPQFAEVVARAGEGGGEQSRQGSAHPTLPLLSLDAAIHILGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVLR Sbjct: 1 MFFFSFPATTLLTWGAAGLIGVLLLADGLYSALAPVPLHSSLFYNKHMVFGLILAGVLLILISLPPLHSYFRESNVGGKRSLPPLAPLPPQFAEVVARAGEGGGEQSRQGSAHPTLPLLSLDAAIHILGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVLR 255
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|553183367|ref|XP_005853886.1| (hypothetical protein NGA_0429700, partial [Nannochloropsis gaditana CCMP526] >gi|422295175|gb|EKU22474.1| hypothetical protein NGA_0429700, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 366.311 bits (939), Expect = 2.149e-125 Identity = 184/189 (97.35%), Postives = 186/189 (98.41%), Query Frame = 0 Query: 1 MFFFSFPATTLLTWGAAGLIGVLLLADGLYSALAPVPLHSSLFYNKHMVFGLILAGVLLILISLPPLHSYFRESNVGGKRSLPPLAPLPPQFAEVVARAGEGGGEQSRQGSAHPTLPLLSLDAAIHILGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGS 189 MFFFSFPATTLLTWGAAGLIGVLLLADGLYSALAPVPLH SLFYNKHMVFGLILAGVLLILISLPPLHSYFRES VGGKRSLPPLAPLPPQFAEVVARAGEGGGEQSRQGSAHPTLP LSLDAAIHILGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLL+VVGVAYALVG+ Sbjct: 1 MFFFSFPATTLLTWGAAGLIGVLLLADGLYSALAPVPLHYSLFYNKHMVFGLILAGVLLILISLPPLHSYFRESTVGGKRSLPPLAPLPPQFAEVVARAGEGGGEQSRQGSAHPTLPPLSLDAAIHILGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLVVVGVAYALVGA 189
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|1026776344|gb|OAE35074.1| (hypothetical protein AXG93_763s1070 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 115.546 bits (288), Expect = 1.440e-25 Identity = 78/209 (37.32%), Postives = 113/209 (54.07%), Query Frame = 0 Query: 47 HMVFGLILAGVLLILISLPPLHSYFRESNVGGKRSLPPLAPLPPQFAEVVARAGEGGGEQSRQGSAHPTLPLLSLDAAIHILGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVLR 255 ++ G+ AG+L+ L+ +P L+ + GK+ PP + A+ V LP + A + + +D GL EA R + G NE P Y S FLKEL+E QLLL+ VGV Y G++ E+ TA +VIFLM +AE+ TE+RAKRAL+ L+ + P A V R EGQ M++ A ++VPGD+V+LR Sbjct: 78 NLFLGVTAAGILMFLLMIPVLNKRRLKGKHNGKKK-PPRTVVDDDLAKKVW-----------------ALPAEKVCADLRV--SD-RVGLSHAEAETRYRRYGGNESVIYSEPGYWSFFLKELHEPAQLLLLCVGVLYLTFGTMEEAITAFLVIFLMASAEVGTEWRAKRALNSLEHSSPPEATVKR-EGQHMKLDARSLVPGDIVILR 264
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|971511410|dbj|GAQ86811.1| (p-type atpase [Klebsormidium nitens]) HSP 1 Score: 102.834 bits (255), Expect = 3.276e-21 Identity = 59/115 (51.30%), Postives = 75/115 (65.22%), Query Frame = 0 Query: 141 ARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVLR 255 A ARL + GPN V P Y + F KE+YE PQLLL+ VGV YAL G + E+ TA VI LM AE+ TE+RAKRA+ L S+ PK A V R G+ +E+ VVPGD+V+L+ Sbjct: 120 AEARLREYGPNAVDLGKGPGYWAFFFKEIYEPPQLLLLGVGVLYALFGGLSEAATAFAVIILMATAEVFTEWRAKRAVGALASSTPKYARVRRG-GRTLEIGRTDVVPGDVVLLK 233
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|504217725|ref|WP_014404827.1| (ATPase [Methanocella conradii] >gi|379320036|gb|AFC98988.1| cation-transporting P-type ATPase, HAD superfamily, subfamily IC [Methanocella conradii HZ254]) HSP 1 Score: 86.6557 bits (213), Expect = 1.068e-15 Identity = 52/123 (42.28%), Postives = 71/123 (57.72%), Query Frame = 0 Query: 132 VSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVL 254 + GL EAR RL GPN + S+L I +E+ E LLL+ VG Y+L G + ++ T VVI L++ AE+ EYRAK+A++ L +A VLRD G EV A VVPGD++ L Sbjct: 4 IERGLTEAEARGRLAIHGPNLIVKPREVSFLGIVAEEITEPMILLLLFVGAVYSLWGKLEDALTIFVVIILLVLAEVWNEYRAKKAIASLAKIAAPVAGVLRD-GAIKEVKAEEVVPGDVLAL 125
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|282157791|dbj|BAI62879.1| (cation-transporting ATPase [Methanocella paludicola SANAE]) HSP 1 Score: 85.5001 bits (210), Expect = 2.397e-15 Identity = 50/120 (41.67%), Postives = 72/120 (60.00%), Query Frame = 0 Query: 135 GLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVL 254 GL EAR RL + GPN ++ S+L I +E+ E LLL+ VGV Y+ G++ ++ T VVI L++ AE+ EYRAK+A++ L A V+R GQ E+ VVPGD++VL Sbjct: 9 GLTEAEARERLARYGPNRIARPREVSFLGIAAEEIREPMILLLLFVGVVYSFWGNLTDALTIFVVIVLLVLAEVWNEYRAKKAIASLSKIAAPRARVIRG-GQVEEIKTDDVVPGDVLVL 127
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|1175322479|ref|WP_081870272.1| (hypothetical protein [Lachnoclostridium phytofermentans]) HSP 1 Score: 85.5001 bits (210), Expect = 3.052e-15 Identity = 43/128 (33.59%), Postives = 78/128 (60.94%), Query Frame = 0 Query: 128 LGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVLR 255 L +D+S GL S EA RL + G N+++ S ++ I +E+ E LLL+ +GV Y++ G + ++ T + VI + E+ TEY+AK+++ L+ V+RD G+ +E+ + +VPGD+++L+ Sbjct: 19 LNSDISKGLSSAEAEKRLKESGLNKITQSKTITFWDILFEEIKEPLILLLLTIGVIYSVWGKIGDTITIIFVILTVTLVEVYTEYKAKKSIESLRKLALPTTWVMRD-GKAVEIETSLIVPGDILILK 145
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|938509518|gb|KPQ42589.1| (cation-transporting ATPase [Candidatus Methanoperedens sp. BLZ1]) HSP 1 Score: 84.7297 bits (208), Expect = 3.838e-15 Identity = 45/122 (36.89%), Postives = 75/122 (61.48%), Query Frame = 0 Query: 133 SHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVL 254 ++GL S EA+ +LL+ GPN + + S+ I E+ E LLL+VVG Y++ G + ++ T +VI L++ AE+ E+RAK+A++ L+ VLRD G+ E+ + VVP D+++L Sbjct: 6 NNGLSSSEAQEKLLKSGPNRIFKATEISFFGIARHEVTEPMILLLLVVGFFYSIWGKLEDAITIFIVIILLVFAEVYNEFRAKKAIASLEKIAAPRTRVLRD-GKITEIDSENVVPDDMLIL 126
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|1180000322|ref|WP_083522676.1| (hypothetical protein [Longilinea arvoryzae]) HSP 1 Score: 84.7297 bits (208), Expect = 5.587e-15 Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 0 Query: 120 SLDAAIHILGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVLR 255 S+D I L + ++GL EA RL Q GPN ++ S+ F +EL+E L+L+V GV YA+ G V E+ T V+I + E+ E R+KRA++ L+ A+V R G E+ +VPGD+++L+ Sbjct: 50 SVDETIARLQTNQTNGLTDPEAGRRLTQAGPNTLAVERPESFWHEFFEELHEPMVLMLLVTGVLYAIWGEVSEAITIFVIILTLNTVEVTNEQRSKRAIASLRKLAEPTASVRRG-GHFTELPVDQIVPGDVILLQ 184
BLAST of EWM30025.1 vs. NCBI_GenBank
Match: gi|902955261|dbj|GAP15713.1| (cation transport ATPase [Longilinea arvoryzae]) HSP 1 Score: 84.3445 bits (207), Expect = 6.198e-15 Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 0 Query: 120 SLDAAIHILGADVSHGLYSVEARARLLQCGPNEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVIFLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGDLVVLR 255 S+D I L + ++GL EA RL Q GPN ++ S+ F +EL+E L+L+V GV YA+ G V E+ T V+I + E+ E R+KRA++ L+ A+V R G E+ +VPGD+++L+ Sbjct: 16 SVDETIARLQTNQTNGLTDPEAGRRLTQAGPNTLAVERPESFWHEFFEELHEPMVLMLLVTGVLYAIWGEVSEAITIFVIILTLNTVEVTNEQRSKRAIASLRKLAEPTASVRRG-GHFTELPVDQIVPGDVILLQ 150 The following BLAST results are available for this feature:
BLAST of EWM30025.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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