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Properties
| Property Name | Value |
|---|
| Product | cation-transporting atpase |
| Orig transcript id | gnl|cribi|Naga_100346g8.7653.mrna |
| Orig protein id | gnl|cribi|Naga_100346g8.7653 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:70793..72035 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna642 ID=rna642|Name=rna642|organism=Nannochloropsis gaditana|type=mRNA|length=1088bp
ATGCACAGAAGGAAGCCTCAAGCTGCCTCCTCCGGCTGGCAATCGATATC
TCTTGGCACTCATCGTTTGTATCCTCTCTTCCCTCCGCCCTTCCTCGCCT
CCTGCCTTCCTCCCCCCCCTCCCCCTGCTCTTCCTAGGAGCGTGGACCTG
GCCAAGGCCGCCGCCGGCATTGTGGTAGCTCCTGAGGACTTCACGGCGCT
GGTCGAGACCTTGAGGGAGGGCCGGAGGCTCCACGCCAATTTCCGCAAGG
CCCTAGCCTTCTACCTGGGCGCCAAGGCCGCCCTCCTCCTCATCTTCCTC
CTCGCCCCTTTCCCCCTCTCCCCCATGCAGATCATCCTCCTTGAGCTCTT
CATGGACGTGGGCGCCTCCGTCACCTTCACCCTGGAGCCGGCAGACGGCG
ACCTGATGCTTCGCCCCCCCCACGGCCTCTCCCCGTTCTTTGACCGGGAG
CTCCTCCACGCCATTGCCGGCGGAGGGATCTCCCTTCTGGCCATCGTCCT
GCTGGCTGGGTGGGGAGGACGGGGGGGGCGGGGGGGAACGACCTCAAGGC
GCACGAGGAGTATCGGCAGTCATTGTATTTCAACGGCTGGCTCCTCGGGC
ATGTATTCCTTGCCTGGCAACTCCGCTCCCTCCATCAGCCCCTCCTCCTT
AAAGGCTTGGCCTCCAATCCTGCCTTCCTGGTCTGGGCAGGGGCGGTGCT
CGGTCTCCTCCTCCTCCTCCTCCTCCTCCCCTCCCTCGCCAAGACCTTGG
GAGTCGTACCTCTACCCCCAAGGGAGTGGGGCCGTCTGTTCCTCCTCTCC
TTGATCGGGACCGGGTGGATGGAGGGATGGAAGCTGTTTCGTTGGTATGG
TGGGGACGGCGGGAGGGTGAGGCAGGCGAGGAGTCTAGCGCGCTTACACC
AAGGAAGCGAGAAGACAGTAACGAGGGAGGGGGCGGGAAGGATTGTGGAG
GCAGAAGCCCGGGTGGTCGATGGGGAAGAGAGTCGTTTGTTAGGCTGAGG
CCCTCAAGATGTGGCGGAGGAAGAGAACAAGAGGGAGGTGAGGGTGGGAA
AAGGAAGATTCGGACACAAGTAACGGTGTATATTCGGC back to topprotein sequence of rna642 >rna642-protein ID=rna642-protein|Name=rna642|organism=Nannochloropsis gaditana|type=polypeptide|length=255bp
MFFFSFPATTLLTWGAAGLIGVLLLADGLYSALAPVPLHSSLFYNKHMVF
GLILAGVLLILISLPPLHSYFRESNVGGKRSLPPLAPLPPQFAEVVARAG
EGGGEQSRQGSAHPTLPLLSLDAAIHILGADVSHGLYSVEARARLLQCGP
NEVSTSDAPSYLSIFLKELYEGPQLLLMVVGVAYALVGSVHESCTALVVI
FLMINAEIITEYRAKRALSRLQSTVPKLAAVLRDEGQEMEVAAATVVPGD
LVVLR back to topmRNA from alignment at CM002456.1:70793..72035- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna642 ID=rna642|Name=rna642|organism=Nannochloropsis gaditana|type=mRNA|length=1243bp|location=Sequence derived from alignment at CM002456.1:70793..72035- (Nannochloropsis gaditana)
TCACCGCAGGCTAGTCGAAGTGCCCGTCTACACGTTCGCATTACCACGTG
CCACAACACGGACGCATCATACCTTTTTGTTAGCTCATTTATTGAAAAGC
ATCCTTCTCAATCAAGATTCTTCGCCTTAGAACATTGTCCGGGCGCCGCT
CTGATCGCTTTTCGCACGTTCACCATCTCCTCTCTGGCCTGCAGCATGTT
CTTTTTCTCCTTTCCCGCTACCACTCTTCTCACGTGGGGTGCAGCGGGTC
TCATTGGAGTCCTTTTACTGGCCGATGGCTTGTACAGTGCTCTTGCACCT
GTTCCACTCCATTCTTCCCTCTTCTATAATAAACATATGGTCTTCGGTCT
CATCTTGGCGGGCGTCCTGCTGATTTTAATCTCCCTGCCCCCGCTTCATT
CTTATTTTCGCGAAAGCAACGTCGGAGGAAAGAGGTCTTTGCCACCTTTA
GCTCCACTTCCCCCTCAATTCGCTGAGGTTGTTGCCCGGGCGGGTGAGGG
AGGAGGAGAACAAAGTCGGCAAGGCTCTGCGCACCCCACCCTCCCACTGC
TGTCTTTGGATGCTGCCATCCATATCTTAGGGGCAGATGTATCCCACGGC
TTATACTCTGTCGAGGCACGAGCACGACTCCTTCAATGCGGTCCCAACGA
GGTCAGCACGTCCGACGCGCCCTCCTATTTATCGATCTTCTTGAAAGAAC
TCTACGAAGGACCGCAGTTGTTGTTGATGGTGGTCGGGGTGGCTTATGCC
CTGGTCGGGTCCGTGCACGAATCTTGCACGGCTCTGGTGGTGATTTTCTT
GATGATTAACGCAGAGATAATCACAGAATATCGGGCGAAGCGGGCCCTGT
CCAGGCTGCAATCAACGGTGAGGAAGGGGATGGAAGGGAGGGAGGAAGGA
AGGGAAAGAGGGACGGACGGATGAAAGAACGGGAGGAGAAGATGACAACA
ATTCTGTAATCCGAGACCTATTCTAATATCCGGTGCCCTCCCCGCATCCT
GCTCCCTGTGTTTCTCGTCCTCCTCCCCTCCCTCCTCCCCCCCTCCAGGT
GCCCAAACTTGCCGCTGTGCTTCGAGACGAAGGGCAAGAGATGGAGGTTG
CGGCGGCCACGGTGGTGCCAGGTGACCTCGTAGTCCTCAGGTAGGACCTC
ACGCCCCCTCTCATCCACGTTTGTCTCCTCTCTACGCAGACGGAGCCCAT
AGCCACCGAGCTCGGGGAGGGGCTCGTGTTCTTTAATCCTGCC back to topCoding sequence (CDS) from alignment at CM002456.1:70793..72035- >rna642 ID=rna642|Name=rna642|organism=Nannochloropsis gaditana|type=CDS|length=1536bp|location=Sequence derived from alignment at CM002456.1:70793..72035- (Nannochloropsis gaditana)
GTGCCCAAACTTGCCGCTGTGCTTCGAGACGAAGGGCAAGAGATGGAGGT
TGCGGCGGCCACGGTGGTGCCAGGTGACCTCGTAGTCCTCAGGTAGATGT
TCTTTTTCTCCTTTCCCGCTACCACTCTTCTCACGTGGGGTGCAGCGGGT
CTCATTGGAGTCCTTTTACTGGCCGATGGCTTGTACAGTGCTCTTGCACC
TGTTCCACTCCATTCTTCCCTCTTCTATAATAAACATATGGTCTTCGGTC
TCATCTTGGCGGGCGTCCTGCTGATTTTAATCTCCCTGCCCCCGCTTCAT
TCTTATTTTCGCGAAAGCAACGTCGGAGGAAAGAGGTCTTTGCCACCTTT
AGCTCCACTTCCCCCTCAATTCGCTGAGGTTGTTGCCCGGGCGGGTGAGG
GAGGAGGAGAACAAAGTCGGCAAGGCTCTGCGCACCCCACCCTCCCACTG
CTGTCTTTGGATGCTGCCATCCATATCTTAGGGGCAGATGTATCCCACGG
CTTATACTCTGTCGAGGCACGAGCACGACTCCTTCAATGCGGTCCCAACG
AGGTCAGCACGTCCGACGCGCCCTCCTATTTATCGATCTTCTTGAAAGAA
CTCTACGAAGGACCGCAGTTGTTGTTGATGGTGGTCGGGGTGGCTTATGC
CCTGGTCGGGTCCGTGCACGAATCTTGCACGGCTCTGGTGGTGATTTTCT
TGATGATTAACGCAGAGATAATCACAGAATATCGGGCGAAGCGGGCCCTG
TCCAGGCTGCAATCAACGGTGCCCAAACTTGCCGCTGTGCTTCGAGACGA
AGGGCAAGAGATGGAGGTTGCGGCGGCCACGGTGGTGCCAGGTGACCTCG
TAGTCCTCAGGTAGATGTTCTTTTTCTCCTTTCCCGCTACCACTCTTCTC
ACGTGGGGTGCAGCGGGTCTCATTGGAGTCCTTTTACTGGCCGATGGCTT
GTACAGTGCTCTTGCACCTGTTCCACTCCATTCTTCCCTCTTCTATAATA
AACATATGGTCTTCGGTCTCATCTTGGCGGGCGTCCTGCTGATTTTAATC
TCCCTGCCCCCGCTTCATTCTTATTTTCGCGAAAGCAACGTCGGAGGAAA
GAGGTCTTTGCCACCTTTAGCTCCACTTCCCCCTCAATTCGCTGAGGTTG
TTGCCCGGGCGGGTGAGGGAGGAGGAGAACAAAGTCGGCAAGGCTCTGCG
CACCCCACCCTCCCACTGCTGTCTTTGGATGCTGCCATCCATATCTTAGG
GGCAGATGTATCCCACGGCTTATACTCTGTCGAGGCACGAGCACGACTCC
TTCAATGCGGTCCCAACGAGGTCAGCACGTCCGACGCGCCCTCCTATTTA
TCGATCTTCTTGAAAGAACTCTACGAAGGACCGCAGTTGTTGTTGATGGT
GGTCGGGGTGGCTTATGCCCTGGTCGGGTCCGTGCACGAATCTTGCACGG
CTCTGGTGGTGATTTTCTTGATGATTAACGCAGAGATAATCACAGAATAT
CGGGCGAAGCGGGCCCTGTCCAGGCTGCAATCAACG back to top
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