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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100718g1.10598.mrna |
| Orig protein id | gnl|cribi|Naga_100718g1.10598 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:62863..64263 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna639 ID=rna639|Name=rna639|organism=Nannochloropsis gaditana|type=mRNA|length=654bp
ATGATGATCCATGTAAATATCACCCCACAGATCGAAAGCATGAAAGCCTC
CGTGTCCTCCTCCCCGCCCTCCCTCGGCTCCGCCTTCCTGACCCTGGCTG
TCAACACCTCCGCAGCCTTCGATACACAGCATCCTGTCGAGGCATTTCAG
GTCTCACCACAGGGAGTGCAGATGGTCTGGGATGGATTGATTCAGGACGG
AGGGGCGGGGGCTTTGCTGTCCACGACGAGCGACGTCTTTGTCTCGGGGA
AAACACGGCGGGAGGTAGATGCGGCCCTCTTCACCCTCCCTCTAGCCATC
ACCCCTGACTCCACCCCGTCCTCCCTGCCGCCCTCCATCGCATCCTCCAT
TGTGCGAAACGCCTTGCCGGCTCTGAAGGACGACGAGGATCTTCGAGCGG
CCCTCCTGGGGCGAGAAAGAGGGAATAGATGGCTGGAGACGCGCGACAAG
AAGCTTCTGAGCAAGCTAGCGGACTTCCATCTTCTAATCTACCTATCCAA
GTACCTTAGGTCAGATGACCTAGCGAAGCTATCCTCTGCCATTGTGTCTT
TGGGTGAGAAGAAAAAAAGAACCAAAGAAAAGAAGGGGGTAGCAAGTCCA
ACCGTCCCTCCCGCGGTCCGCGCGCTTTTGGAGGCGTTGTGTGACGAGGC
ATAG back to topprotein sequence of rna639 >rna639-protein ID=rna639-protein|Name=rna639|organism=Nannochloropsis gaditana|type=polypeptide|length=225bp
MLVTDSTSGEASWPPQRRNTVSPSISPRKHITLTSLFVFGLLSCLVLLPV
EAIKRASTPAGNKASRPSPSPPNPKTRPTDDEKSPSPHPPLRQAKRRDTC
ENHSHGEALTIHLLLSDGQDRVLSLPPATTPQTLRHHLLAQGLVASHQAD
GLRVRRQKPGGRPFTKGLATLTGLQEGDTILLPPSSSPSSPPSSSSSSFV
PYPDCIRLSARTPLSWPGSLSIPPP back to topmRNA from alignment at CM002456.1:62863..64263- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna639 ID=rna639|Name=rna639|organism=Nannochloropsis gaditana|type=mRNA|length=1401bp|location=Sequence derived from alignment at CM002456.1:62863..64263- (Nannochloropsis gaditana)
ATGCTGGTGACGGACAGCACTTCCGGGGAGGCTAGCTGGCCTCCACAAAG
ACGAAATACCGTCTCCCCTAGTATTTCACCCCGAAAACACATCACGCTTA
CCTCTCTATTTGTTTTTGGGCTCCTATCGTGTCTGGTACTCTTGCCAGTA
GAGGCCATCAAGCGTGCTTCCACCCCTGCCGGAAACAAAGCCTCGCGACC
GTCCCCGTCCCCTCCTAACCCAAAAACCAGACCGACCGACGACGAAAAAT
CTCCCAGCCCGCATCCACCCTTACGCCAAGCAAAAAGAAGAGACACGTGT
GAAAACCACAGGTATGACTTTTTCTTGCGGTCTCGAAGGAATTTACCTGT
ATCAACCTCCTGCTCTCAGGGTACCTCGATGCACTCCTCACGCCGTCGTC
TCACAAAGCCTGCACCTCTTCCACACACGTGCCCGCCTGCCTGTCAGCCA
CGGTGAGGCATTGACCATCCATTTACTCCTGAGCGACGGTCAGGATCGCG
TGCTCTCCCTCCCCCCAGCCACCACGCCGCAGACCCTCCGGCATCACCTG
CTCGCTCAAGGCCTGGTCGCTTCCCATCAAGCCGACGGTAAGCCCATCGC
CTTGCTGCTTCTCGACCTCTCTCTCCCCTCCCTCGGGCTACGGTGTCCGG
TCGGTGGCAGTGGGACGTTTTCGAAAGGCTGTACTTTTGTCAAAGGTAAT
TGACCTGCTCTCCCCCTCACGCTAGGACTCCGGGTGAGAAGACAAAAACC
TGGCGGGCGGCCCTTCACGAAAGGTGCGGCGGGATGGGAGGGAAGACGCG
TAAGAAAGCAGGGGGAAATGTCCGCGCTGAGAGCACCGCGACACAGCGTG
GGGGGTCTCACGACATGTTTCCCCCCAGGCCTAGCTACTCTGACCGGCCT
TCAAGAGGGAGACACGATCCTCCTGCCCCCCTCCTCCTCCCCCTCCTCCC
CGCCTTCCTCCTCCTCCTCCTCCTTCGTGCCCTACCCCGAGTATGCATAC
ACGCCCGCAATGGATGGGAAAACCACCAGCTTTCGGGAAATGGAGCTGTA
TAAGGTTGGCAAGGGCGGGGGGAAGGGGAGGAAGGAGGGAGGGAGGGAAG
GAGGACGAGGCGGAGGGCTGCGGGAGGAATCGAAAGATTTATCCTAGGAC
GGCCTCCCACGCGCCACCCCCAAAAAACGTTTCGCGCCCCTGTCCTCTCA
CTGGCAAAACGCGCCGCGTCCCCACCCCCCAACGTCCTTCCCCTGCAAGG
ACCCCGCGCCACTCCCCCTCCCCCTCGTATCTCGCCCAGAATCTGCAGCC
CCCTCCCTGCTATCCTTATCATTCTCTCCCTATCATTGAGCAGGTTAAGC
GCCCGGACTCCCCTTTCCTGGCCCGGGTCTCTGTCAATCCCTCCGCCGTA
A back to topCoding sequence (CDS) from alignment at CM002456.1:62863..64263- >rna639 ID=rna639|Name=rna639|organism=Nannochloropsis gaditana|type=CDS|length=4068bp|location=Sequence derived from alignment at CM002456.1:62863..64263- (Nannochloropsis gaditana)
GTTAAGCGCCCGGACTCCCCTTTCCTGGCCCGGGTCTCTGTCAATCCCTC
CGCCGTAACTGTATAAGGCCTAGCTACTCTGACCGGCCTTCAAGAGGGAG
ACACGATCCTCCTGCCCCCCTCCTCCTCCCCCTCCTCCCCGCCTTCCTCC
TCCTCCTCCTCCTTCGTGCCCTACCCCGAGACTCCGGGTGAGAAGACAAA
AACCTGGCGGGCGGCCCTTCACGAAAGCCACGGTGAGGCATTGACCATCC
ATTTACTCCTGAGCGACGGTCAGGATCGCGTGCTCTCCCTCCCCCCAGCC
ACCACGCCGCAGACCCTCCGGCATCACCTGCTCGCTCAAGGCCTGGTCGC
TTCCCATCAAGCCGACGATGCTGGTGACGGACAGCACTTCCGGGGAGGCT
AGCTGGCCTCCACAAAGACGAAATACCGTCTCCCCTAGTATTTCACCCCG
AAAACACATCACGCTTACCTCTCTATTTGTTTTTGGGCTCCTATCGTGTC
TGGTACTCTTGCCAGTAGAGGCCATCAAGCGTGCTTCCACCCCTGCCGGA
AACAAAGCCTCGCGACCGTCCCCGTCCCCTCCTAACCCAAAAACCAGACC
GACCGACGACGAAAAATCTCCCAGCCCGCATCCACCCTTACGCCAAGCAA
AAAGAAGAGACACGTGTGAAAACCACAGGTTAAGCGCCCGGACTCCCCTT
TCCTGGCCCGGGTCTCTGTCAATCCCTCCGCCGTAACTGTATAAGGCCTA
GCTACTCTGACCGGCCTTCAAGAGGGAGACACGATCCTCCTGCCCCCCTC
CTCCTCCCCCTCCTCCCCGCCTTCCTCCTCCTCCTCCTCCTTCGTGCCCT
ACCCCGAGACTCCGGGTGAGAAGACAAAAACCTGGCGGGCGGCCCTTCAC
GAAAGCCACGGTGAGGCATTGACCATCCATTTACTCCTGAGCGACGGTCA
GGATCGCGTGCTCTCCCTCCCCCCAGCCACCACGCCGCAGACCCTCCGGC
ATCACCTGCTCGCTCAAGGCCTGGTCGCTTCCCATCAAGCCGACGATGCT
GGTGACGGACAGCACTTCCGGGGAGGCTAGCTGGCCTCCACAAAGACGAA
ATACCGTCTCCCCTAGTATTTCACCCCGAAAACACATCACGCTTACCTCT
CTATTTGTTTTTGGGCTCCTATCGTGTCTGGTACTCTTGCCAGTAGAGGC
CATCAAGCGTGCTTCCACCCCTGCCGGAAACAAAGCCTCGCGACCGTCCC
CGTCCCCTCCTAACCCAAAAACCAGACCGACCGACGACGAAAAATCTCCC
AGCCCGCATCCACCCTTACGCCAAGCAAAAAGAAGAGACACGTGTGAAAA
CCACAGGTTAAGCGCCCGGACTCCCCTTTCCTGGCCCGGGTCTCTGTCAA
TCCCTCCGCCGTAACTGTATAAGGCCTAGCTACTCTGACCGGCCTTCAAG
AGGGAGACACGATCCTCCTGCCCCCCTCCTCCTCCCCCTCCTCCCCGCCT
TCCTCCTCCTCCTCCTCCTTCGTGCCCTACCCCGAGACTCCGGGTGAGAA
GACAAAAACCTGGCGGGCGGCCCTTCACGAAAGCCACGGTGAGGCATTGA
CCATCCATTTACTCCTGAGCGACGGTCAGGATCGCGTGCTCTCCCTCCCC
CCAGCCACCACGCCGCAGACCCTCCGGCATCACCTGCTCGCTCAAGGCCT
GGTCGCTTCCCATCAAGCCGACGATGCTGGTGACGGACAGCACTTCCGGG
GAGGCTAGCTGGCCTCCACAAAGACGAAATACCGTCTCCCCTAGTATTTC
ACCCCGAAAACACATCACGCTTACCTCTCTATTTGTTTTTGGGCTCCTAT
CGTGTCTGGTACTCTTGCCAGTAGAGGCCATCAAGCGTGCTTCCACCCCT
GCCGGAAACAAAGCCTCGCGACCGTCCCCGTCCCCTCCTAACCCAAAAAC
CAGACCGACCGACGACGAAAAATCTCCCAGCCCGCATCCACCCTTACGCC
AAGCAAAAAGAAGAGACACGTGTGAAAACCACAGGTTAAGCGCCCGGACT
CCCCTTTCCTGGCCCGGGTCTCTGTCAATCCCTCCGCCGTAACTGTATAA
GGCCTAGCTACTCTGACCGGCCTTCAAGAGGGAGACACGATCCTCCTGCC
CCCCTCCTCCTCCCCCTCCTCCCCGCCTTCCTCCTCCTCCTCCTCCTTCG
TGCCCTACCCCGAGACTCCGGGTGAGAAGACAAAAACCTGGCGGGCGGCC
CTTCACGAAAGCCACGGTGAGGCATTGACCATCCATTTACTCCTGAGCGA
CGGTCAGGATCGCGTGCTCTCCCTCCCCCCAGCCACCACGCCGCAGACCC
TCCGGCATCACCTGCTCGCTCAAGGCCTGGTCGCTTCCCATCAAGCCGAC
GATGCTGGTGACGGACAGCACTTCCGGGGAGGCTAGCTGGCCTCCACAAA
GACGAAATACCGTCTCCCCTAGTATTTCACCCCGAAAACACATCACGCTT
ACCTCTCTATTTGTTTTTGGGCTCCTATCGTGTCTGGTACTCTTGCCAGT
AGAGGCCATCAAGCGTGCTTCCACCCCTGCCGGAAACAAAGCCTCGCGAC
CGTCCCCGTCCCCTCCTAACCCAAAAACCAGACCGACCGACGACGAAAAA
TCTCCCAGCCCGCATCCACCCTTACGCCAAGCAAAAAGAAGAGACACGTG
TGAAAACCACAGGTTAAGCGCCCGGACTCCCCTTTCCTGGCCCGGGTCTC
TGTCAATCCCTCCGCCGTAACTGTATAAGGCCTAGCTACTCTGACCGGCC
TTCAAGAGGGAGACACGATCCTCCTGCCCCCCTCCTCCTCCCCCTCCTCC
CCGCCTTCCTCCTCCTCCTCCTCCTTCGTGCCCTACCCCGAGACTCCGGG
TGAGAAGACAAAAACCTGGCGGGCGGCCCTTCACGAAAGCCACGGTGAGG
CATTGACCATCCATTTACTCCTGAGCGACGGTCAGGATCGCGTGCTCTCC
CTCCCCCCAGCCACCACGCCGCAGACCCTCCGGCATCACCTGCTCGCTCA
AGGCCTGGTCGCTTCCCATCAAGCCGACGATGCTGGTGACGGACAGCACT
TCCGGGGAGGCTAGCTGGCCTCCACAAAGACGAAATACCGTCTCCCCTAG
TATTTCACCCCGAAAACACATCACGCTTACCTCTCTATTTGTTTTTGGGC
TCCTATCGTGTCTGGTACTCTTGCCAGTAGAGGCCATCAAGCGTGCTTCC
ACCCCTGCCGGAAACAAAGCCTCGCGACCGTCCCCGTCCCCTCCTAACCC
AAAAACCAGACCGACCGACGACGAAAAATCTCCCAGCCCGCATCCACCCT
TACGCCAAGCAAAAAGAAGAGACACGTGTGAAAACCACAGGTTAAGCGCC
CGGACTCCCCTTTCCTGGCCCGGGTCTCTGTCAATCCCTCCGCCGTAACT
GTATAAGGCCTAGCTACTCTGACCGGCCTTCAAGAGGGAGACACGATCCT
CCTGCCCCCCTCCTCCTCCCCCTCCTCCCCGCCTTCCTCCTCCTCCTCCT
CCTTCGTGCCCTACCCCGAGACTCCGGGTGAGAAGACAAAAACCTGGCGG
GCGGCCCTTCACGAAAGCCACGGTGAGGCATTGACCATCCATTTACTCCT
GAGCGACGGTCAGGATCGCGTGCTCTCCCTCCCCCCAGCCACCACGCCGC
AGACCCTCCGGCATCACCTGCTCGCTCAAGGCCTGGTCGCTTCCCATCAA
GCCGACGATGCTGGTGACGGACAGCACTTCCGGGGAGGCTAGCTGGCCTC
CACAAAGACGAAATACCGTCTCCCCTAGTATTTCACCCCGAAAACACATC
ACGCTTACCTCTCTATTTGTTTTTGGGCTCCTATCGTGTCTGGTACTCTT
GCCAGTAGAGGCCATCAAGCGTGCTTCCACCCCTGCCGGAAACAAAGCCT
CGCGACCGTCCCCGTCCCCTCCTAACCCAAAAACCAGACCGACCGACGAC
GAAAAATCTCCCAGCCCGCATCCACCCTTACGCCAAGCAAAAAGAAGAGA
CACGTGTGAAAACCACAG back to top
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