EWM30039.1, cds634 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|585112667|gb|EWM30039.1| (hnh endonuclease [Nannochloropsis gaditana]) HSP 1 Score: 1315.83 bits (3404), Expect = 0.000e+0 Identity = 646/646 (100.00%), Postives = 646/646 (100.00%), Query Frame = 0 Query: 1 MEDCEDEDLIDLTGTGEGNFCVTARAQKQLRLRNTAVRNGTGTDCAAKALTQNHVPKLVSIDGDFSKAPCIFAVAAPCSRTEGPFQGERVPVNRLHEDAGTASTNVTECSLNQGERESGGEEKEDYDEKKGARLGDAVWIGDATPKAFSLSPVDLTSPPYDTRASKRRKSEHGRISDVDISPASWTRRSAGCDGAQDTYLGESTLPVTSGGKMCVEDPRPGEGGVSETIKRGTTNRRARELSVDGGETRVEHSGAGKALGCGDDIDYLGPPSPISISSSSSTSSPSSPPFPPSRQPLPAALRLHPDSPSIHAENGEENPEELATRPAAELRAHLRALGVPATGRTKAQLAIRLHACLRARRLANFPSHSTDRYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRRRQGEIAGGRNAGSKERLNSQAGSERREEDKEAEEDGEKETEDLEDEDAKDEGEGGAQKTGKGDCVEIKQQK 646 MEDCEDEDLIDLTGTGEGNFCVTARAQKQLRLRNTAVRNGTGTDCAAKALTQNHVPKLVSIDGDFSKAPCIFAVAAPCSRTEGPFQGERVPVNRLHEDAGTASTNVTECSLNQGERESGGEEKEDYDEKKGARLGDAVWIGDATPKAFSLSPVDLTSPPYDTRASKRRKSEHGRISDVDISPASWTRRSAGCDGAQDTYLGESTLPVTSGGKMCVEDPRPGEGGVSETIKRGTTNRRARELSVDGGETRVEHSGAGKALGCGDDIDYLGPPSPISISSSSSTSSPSSPPFPPSRQPLPAALRLHPDSPSIHAENGEENPEELATRPAAELRAHLRALGVPATGRTKAQLAIRLHACLRARRLANFPSHSTDRYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRRRQGEIAGGRNAGSKERLNSQAGSERREEDKEAEEDGEKETEDLEDEDAKDEGEGGAQKTGKGDCVEIKQQK Sbjct: 1 MEDCEDEDLIDLTGTGEGNFCVTARAQKQLRLRNTAVRNGTGTDCAAKALTQNHVPKLVSIDGDFSKAPCIFAVAAPCSRTEGPFQGERVPVNRLHEDAGTASTNVTECSLNQGERESGGEEKEDYDEKKGARLGDAVWIGDATPKAFSLSPVDLTSPPYDTRASKRRKSEHGRISDVDISPASWTRRSAGCDGAQDTYLGESTLPVTSGGKMCVEDPRPGEGGVSETIKRGTTNRRARELSVDGGETRVEHSGAGKALGCGDDIDYLGPPSPISISSSSSTSSPSSPPFPPSRQPLPAALRLHPDSPSIHAENGEENPEELATRPAAELRAHLRALGVPATGRTKAQLAIRLHACLRARRLANFPSHSTDRYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRRRQGEIAGGRNAGSKERLNSQAGSERREEDKEAEEDGEKETEDLEDEDAKDEGEGGAQKTGKGDCVEIKQQK 646
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|553189592|ref|XP_005855034.1| (hnh endonuclease, partial [Nannochloropsis gaditana CCMP526] >gi|422294032|gb|EKU21332.1| hnh endonuclease, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 537.339 bits (1383), Expect = 0.000e+0 Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 0 Query: 300 ALRLHPDSPSIHAENGEENPEELATRPAAELRAHLRALGVPATGRTKAQLAIRLHACLRARRLANFPSHSTDRYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTL 560 ALRLHPDSPSIHAENGEENPEELATRPAAELRAHLRALGVPATGRTKAQLAIRLHACLRARRLANFPSHSTDRYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALC IDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTL Sbjct: 1 ALRLHPDSPSIHAENGEENPEELATRPAAELRAHLRALGVPATGRTKAQLAIRLHACLRARRLANFPSHSTDRYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCTIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTL 261
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|299117036|emb|CBN73807.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 152.91 bits (385), Expect = 1.442e-37 Identity = 89/204 (43.63%), Postives = 109/204 (53.43%), Query Frame = 0 Query: 369 STDRYSDRRGKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAEL 572 + R++ G V++A + RG+ G LCR C +E P TFCS ACVHEHR+RT GSYVRKCLLVRD G+CA C +DA LY R A W +G + +AV E V GT EGK+ +G+ RRP G FWHADHI+PVV GGG L+N+RTLCV CH AT L Sbjct: 133 AQQRWNPEAGWVDRATMERGERGYPLCRFCNEEVPSARRTFCSDACVHEHRIRTQGSYVRKCLLVRDGGQCAECGVDAAGLYKRAR-----AAWICEGSVVVKR-EAVALEMV-GTPFEGKMPTKGMT----------------------------RRP----TQGKFWHADHIVPVVRGGGQCSLKNYRTLCVPCHAAATKRL 297
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|1124362858|ref|WP_074652879.1| (HNH endonuclease [Terriglobus roseus] >gi|1089034896|emb|SEB61230.1| HNH endonuclease [Terriglobus roseus]) HSP 1 Score: 104.76 bits (260), Expect = 1.635e-22 Identity = 73/206 (35.44%), Postives = 96/206 (46.60%), Query Frame = 0 Query: 378 GKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRR-RQGEIAG 582 G V++ D RG +GR LCR C E PK+ TFCS CVHE +LR+ SY+R+ + RDKGRC C ID + +R LK+ + + + + W G +TR R W ADHI+PVVEGGG L N RTLC+ CH+TATA LR R R+ ++A Sbjct: 10 GWVDRKDHPRGPNGRGLCRWCNLEVPKRRFTFCSDFCVHEWKLRSQPSYLREHVYKRDKGRCCGCGIDTMS------------------------------------------ALRSLKRSRGPRREELMRHW------GFKTRIRKS----------LWDADHIVPVVEGGGECDLANIRTLCLRCHRTATAALRERLRKAKVAA 157
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|504597641|ref|WP_014784743.1| (HNH endonuclease [Terriglobus roseus] >gi|390411670|gb|AFL87174.1| HNH endonuclease [Terriglobus roseus DSM 18391]) HSP 1 Score: 103.99 bits (258), Expect = 3.072e-22 Identity = 73/206 (35.44%), Postives = 95/206 (46.12%), Query Frame = 0 Query: 378 GKVNKADLARGDHGRALCRLCQQECPKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRR-RQGEIAG 582 G V++ D RG +GR LCR C E PK+ TFCS CVHE +LR+ +Y+R + RDKGRC C ID A ++R+ RG K+ + + +G +TR R W ADHI+PVVEGGG L N RTLCV CH+T TA LR R R+ ++A Sbjct: 10 GWVDRKDHPRGPNGRGLCRWCNLEVPKRRFTFCSDFCVHEWKLRSQPAYLRDHVYKRDKGRCCGCGIDTMAALRALKRS------------------------------------RGAKREELMLH------------WGFKTRMRKS----------LWDADHIVPVVEGGGECDLANIRTLCVRCHRTVTAALRERIRKAKVAA 157
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|551213969|ref|WP_022841911.1| (HNH endonuclease [Acidobacteriaceae bacterium TAA166]) HSP 1 Score: 103.605 bits (257), Expect = 5.548e-22 Identity = 74/205 (36.10%), Postives = 93/205 (45.37%), Query Frame = 0 Query: 378 GKVNKADLARGDHGRALCRLCQQEC-PKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRR-RQGEI 580 G +ADL G +G LCR CQ E K+ TFCS CVH+ RLRT Y+R + RD+GRCA+C ID A Y ++R G + GL+ +YG +T R W ADHILPV EGGG L+N RTLC+ CH+ AT++LR R RQ EI Sbjct: 10 GSARRADLPTGPNGLPLCRWCQLEILAKRRRTFCSDYCVHQWRLRTDPGYLRDQVFARDRGRCAVCRIDTVAAYAALKRA------------------------------RGPARAAGLR------------------LYGMKTIASRRS---------LWDADHILPVAEGGGQCDLDNLRTLCLLCHREATSQLRSRLRQIEI 157
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|1180594021|ref|WP_084080171.1| (HNH endonuclease [Edaphobacter aggregans]) HSP 1 Score: 99.7525 bits (247), Expect = 1.317e-20 Identity = 70/209 (33.49%), Postives = 94/209 (44.98%), Query Frame = 0 Query: 378 GKVNKADLARGDHGRALCRLCQQEC-PKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRRRQGEIAGGRN 585 G+ ++ +L G +G LCR C E K+ TFCS CVH+ RLRT Y+R + RD+GRCA+C ID A Y ++R G + GL+ +YG +T R W ADHILPV EGGG L+N RTLC+ CH+ ATA+LR R + + + GR Sbjct: 10 GRASRHELPTGPNGLPLCRWCDLEILAKRRRTFCSDYCVHQWRLRTDPGYLRDQVFARDRGRCAVCHIDTVAAYAALKRA------------------------------RGPARAAGLR------------------LYGMKTVTSRRS---------LWDADHILPVAEGGGQCDLDNIRTLCLLCHREATAQLRARMKRQNSPGRT 161
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|503344516|ref|WP_013579177.1| (HNH endonuclease [Granulicella tundricola] >gi|321162146|gb|ADW67851.1| HNH endonuclease [Granulicella tundricola MP5ACTX9]) HSP 1 Score: 98.2117 bits (243), Expect = 4.058e-20 Identity = 67/199 (33.67%), Postives = 87/199 (43.72%), Query Frame = 0 Query: 378 GKVNKADLARGDHGRALCRLCQQEC-PKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRR 575 G++ L G G+ LCR C+ E K+ TFCS CVH+HRLRT Y+R + RD G CALC D A+Y ++R +G L G+ ++YG +T R W ADHILPV EGGG L+N RTLC+ CH+ TA+LR R Sbjct: 26 GRIKPKALPIGPLGKPLCRWCELEILAKRRRTFCSDYCVHQHRLRTDPGYLRDQVFARDHGLCALCQADTPAIYAALKR--------ARGASRLAGL----------------------------------------SLYGMKTITSRRS---------LWDADHILPVAEGGGQCDLDNLRTLCLPCHREVTAQLRLR 167
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|504030253|ref|WP_014264247.1| (HNH endonuclease [Granulicella mallensis] >gi|358751975|gb|AEU35365.1| HNH endonuclease [Granulicella mallensis MP5ACTX8]) HSP 1 Score: 92.0485 bits (227), Expect = 4.867e-18 Identity = 64/199 (32.16%), Postives = 85/199 (42.71%), Query Frame = 0 Query: 378 GKVNKADLARGDHGRALCRLCQQEC-PKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATAELRRR 575 G+ +A L+ G +G LCR CQ E ++ TFCS CVH+ RLR+ Y+R + RD+G C C D A Y ++R+ GK +V L W TV ++ W ADHI PV EGGG L+N RTLC+ CH+ ATA+LR R Sbjct: 13 GRAQRATLSLGPNGLPLCRWCQMEILARRRRTFCSEYCVHQWRLRSDPGYLRDQVFARDRGICTDCGTDTVAAYAALKRS------------------------------RGKARVEAL------------AVWGLKTVQARRS---------------LWDADHIRPVAEGGGQCDLDNLRTLCLPCHREATADLRLR 154
BLAST of EWM30039.1 vs. NCBI_GenBank
Match: gi|1098154044|emb|SFS20966.1| (HNH endonuclease [Granulicella pectinivorans]) HSP 1 Score: 89.3521 bits (220), Expect = 2.995e-17 Identity = 63/194 (32.47%), Postives = 83/194 (42.78%), Query Frame = 0 Query: 378 GKVNKADLARGDHGRALCRLCQQEC-PKKANTFCSPACVHEHRLRTSGSYVRKCLLVRDKGRCALCAIDAHALYLHVRRTCWAAGWGGKGEKALGGIQAVVDEKVAGTILEGKVKVRGLKQGKCQVGDGVGKAWVTSTVYGAQTRPRPRRPRRPFNSGLFWHADHILPVVEGGGLRGLENFRTLCVACHQTATA 570 G+ ++A L G +G LCR C+ E K+ TFCS CVH+ RLRT Y+R + RDKG CALC D A+Y ++R +G ++AG L G + + W ADHILPV EGGG L+N RTLC+ CH+ TA Sbjct: 4 GRAHRASLPVGPNGLPLCRWCELEILAKRRRTFCSEYCVHQWRLRTDPGYLRDQVFARDKGVCALCQADTLAIYNALKR--------ARGA-----------NRIAGLSLYGLASIDARRS--------------------------------------LWDADHILPVAEGGGQCDLDNLRTLCLPCHREVTA 140 The following BLAST results are available for this feature:
BLAST of EWM30039.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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