EWM30075.1, cds598 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|585112708|gb|EWM30075.1| (major facilitator superfamily domain-containing protein [Nannochloropsis gaditana] >gi|585112709|gb|EWM30076.1| major facilitator superfamily domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1010.36 bits (2611), Expect = 0.000e+0 Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0 Query: 1 MPSPDPTNQNPVKDAALSQGQPSLRTAHTTWGGSYIMPKAPPSLSGPNSAAEGGTSASRIGSQLRSSFINEINTLTKPTLSRLAVSYVGSAPFSDPPGLARIPTTTELFPEGVKGNKEAQALCVPGTAGNVFILGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPMLGKLKHLEPFLKAAPVVVGEEEGEEVILMKSNLEMEQVEEEEDGQSEDKGKSASGEGSWRGWRAYFQGLCNLDFFVWLVGYEGKGRVCEFDGLSHSKPSSCSLSFSRWPHAPCTSPSSSFRPLRSSICRQIIISARDKQPLPPHSSTFLEFSLAHFWGDVWTENWAKGKEMSGYACLADLGLPDLC 497 MPSPDPTNQNPVKDAALSQGQPSLRTAHTTWGGSYIMPKAPPSLSGPNSAAEGGTSASRIGSQLRSSFINEINTLTKPTLSRLAVSYVGSAPFSDPPGLARIPTTTELFPEGVKGNKEAQALCVPGTAGNVFILGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPMLGKLKHLEPFLKAAPVVVGEEEGEEVILMKSNLEMEQVEEEEDGQSEDKGKSASGEGSWRGWRAYFQGLCNLDFFVWLVGYEGKGRVCEFDGLSHSKPSSCSLSFSRWPHAPCTSPSSSFRPLRSSICRQIIISARDKQPLPPHSSTFLEFSLAHFWGDVWTENWAKGKEMSGYACLADLGLPDLC Sbjct: 1 MPSPDPTNQNPVKDAALSQGQPSLRTAHTTWGGSYIMPKAPPSLSGPNSAAEGGTSASRIGSQLRSSFINEINTLTKPTLSRLAVSYVGSAPFSDPPGLARIPTTTELFPEGVKGNKEAQALCVPGTAGNVFILGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPMLGKLKHLEPFLKAAPVVVGEEEGEEVILMKSNLEMEQVEEEEDGQSEDKGKSASGEGSWRGWRAYFQGLCNLDFFVWLVGYEGKGRVCEFDGLSHSKPSSCSLSFSRWPHAPCTSPSSSFRPLRSSICRQIIISARDKQPLPPHSSTFLEFSLAHFWGDVWTENWAKGKEMSGYACLADLGLPDLC 497
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|585103286|gb|EWM22710.1| (major facilitator superfamily domain-containing protein 1 isoform 1 [Nannochloropsis gaditana]) HSP 1 Score: 184.882 bits (468), Expect = 6.585e-48 Identity = 114/310 (36.77%), Postives = 178/310 (57.42%), Query Frame = 0 Query: 65 RSSFINEINTLTKPTLSRLAVSYVGSAPFSDPPGLARIPTTTELFPEGVKGNKEAQALCVPGTAGNVFILGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPMLGKLKHLEPFLKAAPVVVGEEEGEEVILMKSNLEME----QVEEEEDGQSEDKGKSASGEGSW 370 +S + ++ +L P+LSR+A+S AP SD P + + +L VK +EA+ LC+PGT ++ ++ AC I G ++ +L AVS +M M+ TYG +SGLP++ +IFA +GG ++D +GADK+CVL++ I +LG+ + +V +RS+ LL Q++LG+G L Q VF++LA DP + F FA++ + A F F LSPL+ ++S YG+ AS+W T + LSFL P+LGKL+H+ P L+A EE E + + E + + EE G + EGSW Sbjct: 74 QSFMVRQLESLRAPSLSRVALS---GAP-SDIPDVGLMLPHVDL---DVK-TEEAKMLCIPGTRWHMLLVVLACSIAFGPSFSRSILSAVSADVMLAFGMTKATYGALSGLPAIPNIFASPIGGAIVDRLGADKSCVLYSGITVLGSICLSTAVYIRSVHLLAAAQILLGIGRGTLVIAQKVFLKLAADPKETSFLFALSFSISHAGMFMAFFLSPLIEDNSPYGYLASVWASTGITVLSFLCTIPLLGKLRHILPLLRA-------EEQESFLADEEEEEEDGKAGEAEERGGGPTASSRWDRREEGSW 368
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|553193835|ref|XP_005855840.1| (major facilitator superfamily domain-containing protein 1 isoform 1 [Nannochloropsis gaditana CCMP526] >gi|422293213|gb|EKU20513.1| major facilitator superfamily domain-containing protein 1 isoform 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 183.341 bits (464), Expect = 2.158e-47 Identity = 103/260 (39.62%), Postives = 162/260 (62.31%), Query Frame = 0 Query: 65 RSSFINEINTLTKPTLSRLAVSYVGSAPFSDPPGLARIPTTTELFPEGVKGNKEAQALCVPGTAGNVFILGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPMLGKLKHLEPFLKA 324 +S + ++ +L P+LSR+A+S AP SD P + + +L VK +EA+ LC+PGT ++ ++ AC I G ++ +L AVS +M M+ TYG +SGLP++ +IFA +GG ++D +GADK+CVL++ I +LG+ + +V +RS+ LL Q++LG+G L Q VF++LA DP + F FA++ + A F F LSPL+ ++S YG+ AS+W T + LSFL P+LGKL+H+ P L+A Sbjct: 74 QSFMVRQLESLRAPSLSRVALS---GAP-SDIPDVGLMLPHVDL---DVK-TEEAKMLCIPGTRWHMLLVVLACSIAFGPSFSRSILSAVSADVMLAFGMTKATYGALSGLPAIPNIFASPIGGAIVDRLGADKSCVLYSGITVLGSICLSTAVYIRSVHLLAAAQILLGIGRGTLVIAQKVFLKLAADPKETSFLFALSFSISHAGMFMAFFLSPLIEDNSPYGYLASVWASTGITVLSFLCTIPLLGKLRHILPLLRA 325
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|224001012|ref|XP_002290178.1| (transporter belonging to the MFS superfamily [Thalassiosira pseudonana CCMP1335] >gi|220973600|gb|EED91930.1| transporter belonging to the MFS superfamily [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 74.3294 bits (181), Expect = 1.698e-10 Identity = 50/180 (27.78%), Postives = 85/180 (47.22%), Query Frame = 0 Query: 132 FILGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIK---TYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSA 308 +LG C +M GS A ++ A+ QL +MP S + ++ + S+ ++ L GG +D GA + LF F V G+ + ++ V+ +S L+ G+ G+G + L Q + +V F + + R S I+SP VA S+ + S W+G +L +S L A Sbjct: 52 LVLGLTCVVMTGSYYAYDIPSALHEQLQEYMPQSASFETRFNLLYTVYSIPNVILPLFGGNFVDRFGAPRCLALFAFTVFCGSVLLSIGVANKSWHLMYFGRFTFGLGAESLCVAQSTITSEWFEGKEVAFAMGIGLSVSRLGSIWNNIVSPKVANSA--NIEISFWIGAVLTLVSLLLA 229
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|403346132|gb|EJY72450.1| (Major facilitator superfamily protein (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 72.0182 bits (175), Expect = 8.018e-10 Identity = 50/180 (27.78%), Postives = 93/180 (51.67%), Query Frame = 0 Query: 133 ILGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLV---AESSTYGFQASMWMGTILCFLSFLSAF 309 IL CF+ + +++ +L+ ++ YG++ + S+ +IF LV G VID +G K+ + F FI+L G + +S + S L L+G+++LG+ + LG ++ I L ++GF A+ +A + + +LSP + A+S TY + G +L ++F+ AF Sbjct: 52 ILALVCFMKFSTYFLTNTPGSITQELLEKYEITNVEYGMLFSIYSIPNIFLSLVTGLVIDRMGIRKSTICFNFIILFGQGLFALSSYIESYYLALIGRLILGIATESLGVAVVIIINLWFQNKEIGFACAILITISKAGTSMSNLLSPQIMVAADSITY----VLCFGFLLQSIAFICAF 227
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|1160562377|ref|XP_020430078.1| (hypothetical protein PPL_08595 [Polysphondylium pallidum PN500] >gi|281203754|gb|EFA77950.1| hypothetical protein PPL_08595 [Polysphondylium pallidum PN500]) HSP 1 Score: 68.5514 bits (166), Expect = 1.251e-8 Identity = 55/218 (25.23%), Postives = 102/218 (46.79%), Query Frame = 0 Query: 161 HMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPMLGKLKHLEPFLKAAPVVVGEEEGEEVILMKSNLEMEQVEEEEDGQSEDKGKSASGEGSWRGWRAYFQ 378 H M + + + +L ++F ++GG ++D G +K ++F I+ L + +SVS S LLL +V+LG+G + + FI V F + S+ + AS +F + P + +S Q +MW TI+ ++ +S F + K L+ F V VG++ E + +N+ E+ E++D E+ K E + R ++ Sbjct: 140 HYNMDSSQFSKLYTVYALPNLFMVILGGILVDLFGPNKCSLVFQTILFLSTVLTAISVSNASYGLLLFSKVLLGIGGETILVCISAFIAKWFSANDVPFVLGLESSWVQIASLMSFAVLPSLYNAS--NLQFTMWFITIVSIIALVSNFVFVIFQKRLK-FRDEVYVSVGDDIENEKVNQTNNINNERDNEKDD---EELAKQKELESMTKTERLVYE 351
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|661179430|emb|CDH57922.1| (predicted protein [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 67.781 bits (164), Expect = 2.294e-8 Identity = 52/195 (26.67%), Postives = 92/195 (47.18%), Query Frame = 0 Query: 134 LGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIR--LACD-------PAKVGFYFAVASAAYRAASF-GTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPMLGKLKHL 318 L CA F+ VGS A L A+ + ++ YGV+ S+ + + GG +DA G K ++ T ++ +GN + ++S +S+S +++G+++ G+ GSG +V ++ + C +GF V+ R ASF + P+ + YG+ W +LC S + LG +KHL Sbjct: 170 LACALFLAVGSHFAAHTLGAMKNIIKEEFGITNSEYGVLQSSVSIVNTILPVFGGVFLDAFGTAKGSIITTALITIGNVLVSLSTHSKSMSTMVMGRILYGI-----GSGNVVIVQETILCQWFHGRDLAGVIGFMLTVS----RLASFMAQATVIPIAESTGWYGY--GFWFSALLCLFSLVINLVYLGLMKHL 353
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|1183504706|gb|ORZ28274.1| (major facilitator superfamily domain-containing protein [Lobosporangium transversale]) HSP 1 Score: 65.4698 bits (158), Expect = 1.298e-7 Identity = 62/283 (21.91%), Postives = 129/283 (45.58%), Query Frame = 0 Query: 34 SYIMPKAPPSLSGPNSAAEGGTSASRIGSQLRSSFINEINTLTKPTLSRLAVSYVGSAPFSDPPGLARIPTTTELFPEGVKGNKEAQALCVPGTAGNVFILGCACFIMVGSVAAKEVLMAVSVQLMAHMPMSIKTY----GVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAK---VGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAF 309 S++ + P L N + GG R + +++++ T+ P + A ++ P + + V+ +++A + T + +L AC ++ G+ ++ A++VQL + T+ ++ SL +I ++GG +ID + A + VLF+ + LG ++ + VS++S+ ++++G+++ G+G + L Q ++ D K +GF + ++ R A+ LSP +A G + W G +C LS L F Sbjct: 2 SFLDEQTP--LISSNRESIGGDRLGRNTKNNKGLYVSDLGTIHCPDNNNFA-PHLQHDDILPRPNRQHLQQLLHQRFDRVRRHEQAHVI----TTRHWVVLTLACLLLFGNYYCYDIPAALNVQLEEWLGADYATHQYHLNLLYSAYSLPNIVLPVLGGYLIDRLSASRMLVLFSLCICLGQSIFAIGVSVKSIWVMVLGRLIFGIGGECLEIAQ---AKITTDWFKARWLGFALGMNLSSARIATAINDNLSPAIATHGG-GVIGASWAGVGICVLSLLCGF 273
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|1134869639|gb|OMJ68155.1| (hypothetical protein SteCoe_34476 [Stentor coeruleus]) HSP 1 Score: 64.6994 bits (156), Expect = 1.523e-7 Identity = 44/159 (27.67%), Postives = 80/159 (50.31%), Query Frame = 0 Query: 153 AVSVQLMAHMPMSIKTYGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPM 311 A+ QL + + Y + + S +I ++GG ++D IG ++FT ++LLG A+ T SV + + + L G+ + G+G + L Q I +V F +A+ R ++ P++ E ++ GF S+ +G ILC +SF+SA + Sbjct: 58 ALQTQLQHTLGIDSIKYNLFYSVYSFPNIIIPILGGYLVDRIGNRNCNIVFTLLILLGQALFTFSVIIDNYPMALAGRCLFGIGGESLNISQYNVIIGWAHAKEVSFVLGLAATLNRLSTAANDNAIPIIQEKTSLGF--SLCIGVILCGISFMSAIIL 214
BLAST of EWM30075.1 vs. NCBI_GenBank
Match: gi|673023934|ref|XP_008865928.1| (hypothetical protein H310_03735 [Aphanomyces invadans] >gi|574479156|gb|ETW06151.1| hypothetical protein H310_03735 [Aphanomyces invadans]) HSP 1 Score: 62.7734 bits (151), Expect = 6.959e-7 Identity = 46/186 (24.73%), Postives = 88/186 (47.31%), Query Frame = 0 Query: 132 FILGCACFIMVGSVAAKEVLMAVSVQLMAH---MPMSIKT--YGVVSGLPSLSSIFACLVGGPVIDAIGADKACVLFTFIVLLGNAMATVSVSLRSLSLLLVGQVVLGVGEKPLGSGQLVFIRLACDPAKVGFYFAVASAAYRAASFGTFILSPLVAESSTYGFQASMWMGTILCFLSFLSAFPML 312 IL +C +M+G+ + A+ QL H +P Y ++ L S+ +I GG ++D +GA +LF I+ G + + S +++L+G+V+ G+G + LG Q + ++ + + R S LSP +A S Y +++W+G I+C +S ++A ++ Sbjct: 11 LILFLSCTLMIGNYYCFDNPAALKSQLQQHFNNLPADRYEFLYNLLYTLYSIPNIILPFCGGFLVDRLGARVTLLLFAGIITTGQVVFAIGCSTTQFNIMLLGRVLFGLGGESLGVAQSTLVASWFKNKELAMALGINLSIARLGSVFNNELSPEIA--SEYNVSSALWVGVIMCGVSLIAALTLI 194 The following BLAST results are available for this feature:
BLAST of EWM30075.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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