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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100003g6.1869.mrna |
| Orig protein id | gnl|cribi|Naga_100003g6.1869 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1172212..1175260 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna469 ID=rna469|Name=rna469|organism=Nannochloropsis gaditana|type=mRNA|length=612bp
ATGCCGCCGGAGCCACCCAGTGCCCGTGCGCGCCTGCCCTGGTGGTGGAG
CCTGGCGGATACCCAGGGCGAGAACGTGTTGGCGTTCCTGGGGGCCGCCT
CGTTCCTGACGTACGTTTTGCACATGCCCACGGTGGTGCGTGCCGTCGAG
GAAGGGAAGTGGGGGAAAGTGGAGCGGTTTGCGGGCATGGTGTCGGGCGT
CCTGGGCGTGGTGTCGGAAAACGACTCCCTGCGCATGCTCGCTGACGTGG
CCGGCATGACCGAGCAACTGGACGGGATGTGGCGCGATGCTCAGAGGGTA
CAAGGGGTTCTGCGAGATACCACCCCGGAGGACATTGTGGCCGTTCTCCC
GGCGTCTCACATAGCGGGGCTGGTTCGGCGGAAGCGAAAGAGGGCCTCGC
GGGCGCTTAAAGGGCAAATGCGCGATATCTTGATTTGGATGCGGTCGAAT
GAGTTGCCAGCACGAGTGGTATATCCACTTTTGACTCCATTGTGTGTGTA
CGCAACTGACGCATTGATGGGCTTTGAAGAGGATGAACATGCCGGGGATG
AAGAGGAAGAGGAGGAGCAGGAGGTTGCTGGGCATTTGGGGTTGTATGAA
ATTGGCTTGTAG back to topprotein sequence of rna469 >rna469-protein ID=rna469-protein|Name=rna469|organism=Nannochloropsis gaditana|type=polypeptide|length=206bp
MPALLASTQHPSDHIHLRFIFANHDGVSVELSVPLGIRVSELKSRLREAW
PEELHTDTSSGGGVSSGNQGTCFDYCSCSPEYDEEGEDRSDSEAEEDYQE
EGRAIQAGVSPPRIKAPEVARLRFICMGQGLLRDTCTLQECRIPCFDTHP
TPVNVSIRPAPPRPPRHGDRGHGQKKKKKTLGEDVGGLDGTRGSSLPTAC
VSCSIM back to topmRNA from alignment at CM002455.1:1172212..1175260+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna469 ID=rna469|Name=rna469|organism=Nannochloropsis gaditana|type=mRNA|length=3049bp|location=Sequence derived from alignment at CM002455.1:1172212..1175260+ (Nannochloropsis gaditana)
gcgcgaaaacgCCGACCAGAAAAAGGAGACACAGGAGGCTCGATGCCCGG
GCTTCCGTGTGGTCTTGCCATGGCATCTATGCGAGTCTGACGTCCGTCCT
GGTTGCCCCGTTTGCGTCACGCTTTTTTGGAATGATAGGGAGGCCTTGAG
ATCCGCTTGCTTGCCACTGGACGGCCCCTGCACCACTCCCTCGTCCAGCG
TGTCCTCCATCCTCGTGTCATCGGCAGAAAAAGGCGGCCCGCCGAGCGTG
CACCACAGTCAACCAACACTGTTCCATGCCTGCATTACTGGCCTCTACCC
AACATCCTTCCGACCACATCCATCTACGGTAAGGGAACTGCGAGTTGTGG
CTCGAAGTGTGATGATGCCGTCATGCCAGAAAATTTGAACAAGTTGATGT
TTTTTGTGATATCGCCGCTACTTTGCTGGAGAGCGTGCAATAATTACCTC
CGACATACCTACATACAGATTTATTTTTGCTAACCATGATGGTGTATCTG
TGGAGCTTTCAGTTCCGCTCGGCATAAGGGTGTCGGAGCTGAAAAGCCgc
ctgagggaggcatggCCAGAAGAGCTGCATACCGACACGAGTAGTGGCGG
TGGCGTTTCAAGCGGGAATCAAGGCACATGTTTTGATTACTGCTCGTGTA
GCCCGGAAtacgacgaggaaggggaggatagGTCAGActcagaggcggag
gaagactaccaagaggagggcagggcaaTACAGGCTGGGGTTAGTCCTCC
TCGTATCAAAGCACCTGAGGTGGCGCGTCTCCGTTTCATTTGCATGGGTC
AAGGCCTGCTCCGAGATACGTGTACATTACAAGGTAGGTAGGTAGTGGTA
GCGGAGCGGAGGATTGGGGTGTCGACTGCAGGAATGCCCTCGATATCTCG
CCAGCCAGCACTTTGCGCAGCTTTGTATTTAGGCTAGTGTGCTTACGCTG
ATTCTGCCAAAGTGGAGCCTTGTTTCTCATTATGTCGTCCATTGAACCCA
CAGAATGTCGCATTCCTTGTTTCGACACCCACCCCACGCCTGTCAACGTC
TCCATCCGACCCgccccgccgcgtcctcctcgacatgGAGATAGAGGGCA
TggacaaaaaaagaaaaagaaaacacTTGGTGAAGACGTGGGGGGACTTG
ATGGGACACGGGGTTCGTCTTTGCCGACAGCATGTGTGTCTTGCAGTATC
ATGTAAAAAACAAGGGGGTTCGACACACATGACGGGATAAgactggaggg
ggagggggcctgCTTGGAGAGGTCCTTCGCGGGATTGACTGATCATATGA
GCTGGCGCTTACGTGCTATCACCGAGCACATTGGAGACGCCTTTGAAACC
TGAAATCAAATTTGTACAAGCCTGGCACCGTCATCTCAATTTATACGCCA
GTCTTGAAATCTGACAGTCACTCGTTTGAAATCTTGTAGCTCTCTACGGA
AACTACAGACTCCATGTTGTTAGTTCATGCGTGGAATATCAAACAATCTA
TGTCGTGAATTTCAGACCACACGTGAGATAGAGAACCCTCGGGCGGATGA
GATACACAgcatcttttccttccactcgACGGGTAAGCAACCTCCCTGCA
AAAAATTATCGACATGAATAAGATCTTGCGATTTGCTTGCTTTCTTAGTT
TAAAATGGCTGTCCCTTTGTCATTGTTTGCGTTTTAAGTTACTCTGGACA
TCACTTATGcaagaggtggggaggttacaTTTTCCACCTGTGTATCCCGC
CCGGTATCAGCCCCGTCCAAATGTCGCGCTCTGCGGGAAGAAGTGAGTGT
ACGGCAGTTTCAAAGGATAGTGTTCATCCGCATGTACATCGATCCTTCTT
GATGGGGAACAAGCACGTTCAGCACCGATCACTAAGAAAGGACCACGCCG
CACGACAAATGAATGCGGAAgtcctcttctttcaaatTTAATAATCTGCA
CATAATGAAAATGATTACAACTGAGAGGAATGTAAAGATCTATAGGAGAT
CGGGCATAAGCCACCTCTTGAGCAATTTAATTTGACCAACGCGAACAAAA
GAAATAGGATGGCGTCTCTCAAACCGATGTAGTAGTCGACGAATTTTTTA
CTGCACACTGTTTGTTACTTTGTGAGCGCTTTCCACTTTGATAATTGTGT
CTGGAATGATGCAAATAAAGATTTACTGACCTTTACGCGAACTTCTTTCA
AAATATCACTTTGGCAGGACGCGTGTCACGACGGAATACAACAAAAGGGA
GGCCGCGATGCGTCGGTCCCCCAACGGTACGGCCCACGCATCGAAGGAGA
ATAATTGATCTGAAAACAGCTACCAACATCTCAGGATGAGAAAAGTGGAA
GCATATGGCTTTGCGGGGTGGATTGGCACATTTGTGGTTTCTGGTACGTC
TTGATGACATTTTTTCGCGTTATCGACCTgcatctcccttcctgcctagA
TCACACACCCCGTTGCCTGGGGTCAGGTCCCCATAGTTATCTGCAGCGTT
ATTTTTGACGTTTGGGCCAACATCTTTGTCCATGCACATGAACAGGGCTC
TTTCTCATGTGGGTTTACATTCCGGAGGCCTGGCTTCATGCAATGGGCGT
CACCTATTACCCGCACAAGGAGTGGGCCCTCTCATTACCAGCTTTCCTGT
GCGTCTCCTACGCGCTCTCCAGCATTGTGTACGTGGCATTGAATCTAATG
AGTACGCCGCCGCTGCATTCATACGAGACGATCACAGACCGATGGGCTCG
AAGGCCGCAGACATGCCTCAATAGTGAGGTGCCAGGGCGAAGTGATTCAC
CTTCAGTGCCGTATTTCGCCGATTTGGACATTGGGGTTGTGAATCAGTAT
ATGTACACAGACGAGTGTTGCGAAGTGATCAACGCGGACAATTGAAAAGG
CGAAATTTGGCCAGATGTTGGTGTGTGAATGCAGATGTACGGGTACAGCC
CATCTGGCGATATTCACGAATATGCGCAGATATGAATGAGGTCCCTGGAC
CAAGCATCTGACGGAGATAAAGAAAGAATTTCTGTGCATCGAACGTACC back to topCoding sequence (CDS) from alignment at CM002455.1:1172212..1175260+ >rna469 ID=rna469|Name=rna469|organism=Nannochloropsis gaditana|type=CDS|length=1863bp|location=Sequence derived from alignment at CM002455.1:1172212..1175260+ (Nannochloropsis gaditana)
ATGCCTGCATTACTGGCCTCTACCCAACATCCTTCCGACCACATCCATCT
ACGATTTATTTTTGCTAACCATGATGGTGTATCTGTGGAGCTTTCAGTTC
CGCTCGGCATAAGGGTGTCGGAGCTGAAAAGCCgcctgagggaggcatgg
CCAGAAGAGCTGCATACCGACACGAGTAGTGGCGGTGGCGTTTCAAGCGG
GAATCAAGGCACATGTTTTGATTACTGCTCGTGTAGCCCGGAAtacgacg
aggaaggggaggatagGTCAGActcagaggcggaggaagactaccaagag
gagggcagggcaaTACAGGCTGGGGTTAGTCCTCCTCGTATCAAAGCACC
TGAGGTGGCGCGTCTCCGTTTCATTTGCATGGGTCAAGGCCTGCTCCGAG
ATACGTGTACATTACAAGAATGTCGCATTCCTTGTTTCGACACCCACCCC
ACGCCTGTCAACGTCTCCATCCGACCCgccccgccgcgtcctcctcgaca
tgGAGATAGAGGGCATggacaaaaaaagaaaaagaaaacacTTGGTGAAG
ACGTGGGGGGACTTGATGGGACACGGGGTTCGTCTTTGCCGACAGCATGT
GTGTCTTGCAGTATCATGTAAATGCCTGCATTACTGGCCTCTACCCAACA
TCCTTCCGACCACATCCATCTACGATTTATTTTTGCTAACCATGATGGTG
TATCTGTGGAGCTTTCAGTTCCGCTCGGCATAAGGGTGTCGGAGCTGAAA
AGCCgcctgagggaggcatggCCAGAAGAGCTGCATACCGACACGAGTAG
TGGCGGTGGCGTTTCAAGCGGGAATCAAGGCACATGTTTTGATTACTGCT
CGTGTAGCCCGGAAtacgacgaggaaggggaggatagGTCAGActcagag
gcggaggaagactaccaagaggagggcagggcaaTACAGGCTGGGGTTAG
TCCTCCTCGTATCAAAGCACCTGAGGTGGCGCGTCTCCGTTTCATTTGCA
TGGGTCAAGGCCTGCTCCGAGATACGTGTACATTACAAGAATGTCGCATT
CCTTGTTTCGACACCCACCCCACGCCTGTCAACGTCTCCATCCGACCCgc
cccgccgcgtcctcctcgacatgGAGATAGAGGGCATggacaaaaaaaga
aaaagaaaacacTTGGTGAAGACGTGGGGGGACTTGATGGGACACGGGGT
TCGTCTTTGCCGACAGCATGTGTGTCTTGCAGTATCATGTAAATGCCTGC
ATTACTGGCCTCTACCCAACATCCTTCCGACCACATCCATCTACGATTTA
TTTTTGCTAACCATGATGGTGTATCTGTGGAGCTTTCAGTTCCGCTCGGC
ATAAGGGTGTCGGAGCTGAAAAGCCgcctgagggaggcatggCCAGAAGA
GCTGCATACCGACACGAGTAGTGGCGGTGGCGTTTCAAGCGGGAATCAAG
GCACATGTTTTGATTACTGCTCGTGTAGCCCGGAAtacgacgaggaaggg
gaggatagGTCAGActcagaggcggaggaagactaccaagaggagggcag
ggcaaTACAGGCTGGGGTTAGTCCTCCTCGTATCAAAGCACCTGAGGTGG
CGCGTCTCCGTTTCATTTGCATGGGTCAAGGCCTGCTCCGAGATACGTGT
ACATTACAAGAATGTCGCATTCCTTGTTTCGACACCCACCCCACGCCTGT
CAACGTCTCCATCCGACCCgccccgccgcgtcctcctcgacatgGAGATA
GAGGGCATggacaaaaaaagaaaaagaaaacacTTGGTGAAGACGTGGGG
GGACTTGATGGGACACGGGGTTCGTCTTTGCCGACAGCATGTGTGTCTTG
CAGTATCATGTAA back to top
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