EWM30352.1, cds469 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|585113011|gb|EWM30352.1| (hypothetical protein Naga_100003g6 [Nannochloropsis gaditana]) HSP 1 Score: 422.935 bits (1086), Expect = 7.735e-150 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0 Query: 1 MPALLASTQHPSDHIHLRFIFANHDGVSVELSVPLGIRVSELKSRLREAWPEELHTDTSSGGGVSSGNQGTCFDYCSCSPEYDEEGEDRSDSEAEEDYQEEGRAIQAGVSPPRIKAPEVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDRGHGQKKKKKTLGEDVGGLDGTRGSSLPTACVSCSIM 206 MPALLASTQHPSDHIHLRFIFANHDGVSVELSVPLGIRVSELKSRLREAWPEELHTDTSSGGGVSSGNQGTCFDYCSCSPEYDEEGEDRSDSEAEEDYQEEGRAIQAGVSPPRIKAPEVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDRGHGQKKKKKTLGEDVGGLDGTRGSSLPTACVSCSIM Sbjct: 1 MPALLASTQHPSDHIHLRFIFANHDGVSVELSVPLGIRVSELKSRLREAWPEELHTDTSSGGGVSSGNQGTCFDYCSCSPEYDEEGEDRSDSEAEEDYQEEGRAIQAGVSPPRIKAPEVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDRGHGQKKKKKTLGEDVGGLDGTRGSSLPTACVSCSIM 206
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|553178974|ref|XP_005852630.1| (hypothetical protein NGA_0731210 [Nannochloropsis gaditana CCMP526] >gi|422295904|gb|EKU23203.1| hypothetical protein NGA_0731210 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 419.468 bits (1077), Expect = 1.765e-148 Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0 Query: 1 MPALLASTQHPSDHIHLRFIFANHDGVSVELSVPLGIRVSELKSRLREAWPEELHTDTSSGGGVSSGNQGTCFDYCSCSPEYDEEGEDRSDSEAEEDYQEEGRAIQAGVSPPRIKAPEVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDRGHGQKKKKKTLGEDVGGLDGTRGSSLPTACVSCSIM 206 MPALLASTQHPSDHIHLRFIFANHDGVSVELSVPLGIRVSELKSRLREAWPEELHTDTSSGGGVSSGNQGTCFDYCSCSPEYDEEGEDRSDSEAEEDYQE+GRAIQAGVSPPRIKAPEVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDR HGQKKKKKTLGEDVGGLDGTRGSSLPTACVSCSIM Sbjct: 1 MPALLASTQHPSDHIHLRFIFANHDGVSVELSVPLGIRVSELKSRLREAWPEELHTDTSSGGGVSSGNQGTCFDYCSCSPEYDEEGEDRSDSEAEEDYQEKGRAIQAGVSPPRIKAPEVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDREHGQKKKKKTLGEDVGGLDGTRGSSLPTACVSCSIM 206
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|673035304|ref|XP_008871613.1| (hypothetical protein H310_07878 [Aphanomyces invadans] >gi|574472833|gb|ETV99837.1| hypothetical protein H310_07878 [Aphanomyces invadans]) HSP 1 Score: 67.3958 bits (163), Expect = 3.760e-11 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 0 Query: 83 DEEGEDRSDSEAEEDYQEEGRAIQAGVSPPRIKAPE-VARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRP 159 ++EG + + + + E + + PP + PE + +R ICMG G+L+DT TL EC++P F HPTPVNVSI P Sbjct: 12 NKEGVKITLATTRDQHVSEVKTQLLALWPPGLAKPEAITSIRLICMGLGVLQDTKTLVECKVPIFPGHPTPVNVSILP 89
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|298712416|emb|CBJ33195.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 67.3958 bits (163), Expect = 7.298e-11 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 0 Query: 118 EVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDRGHGQKKKKKTLGEDVGGL 188 +++ +R +CMG G+L D +L ECR+P FD HPTPVNV+IRP + P+ G R H K+ + +D GG+ Sbjct: 65 DLSHVRLVCMGFGILPDAKSLTECRVPHFDAHPTPVNVAIRPKNIQVPQSGWRLH--KQSSRLPWQDWGGV 133
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|698804612|ref|XP_009835335.1| (hypothetical protein H257_10471 [Aphanomyces astaci] >gi|574109785|gb|ETV75287.1| hypothetical protein H257_10471 [Aphanomyces astaci]) HSP 1 Score: 63.5438 bits (153), Expect = 1.031e-9 Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0 Query: 83 DEEGEDRSDSEAEEDYQEEGRAIQAGVSPPRIKAPE-VARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRP 159 ++EG + + + + + + V P + PE + +R ICMG G+L+DT TL EC++P F HPTPVNVSI P Sbjct: 12 NKEGVKITLASTRDKHVSDVKQQLLAVWPADLAKPESLTSIRLICMGLGVLQDTKTLVECKVPIFPGHPTPVNVSILP 89
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|1173947735|gb|OQR95936.1| (hypothetical protein THRCLA_22047 [Thraustotheca clavata]) HSP 1 Score: 62.7734 bits (151), Expect = 2.596e-9 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 111 PPRIKAPE-VARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDRGHGQKKKKKT 180 P + PE ++ +RFICMG G L+D TL+EC++P F THPTPVNVS+ P+ +H + H Q + +T Sbjct: 42 PEDVPRPESISNIRFICMGLGALQDGKTLRECKVPSFPTHPTPVNVSVTPS-----KHPVQQHTQSEGGRT 107
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|635370863|emb|CCI40940.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 61.6178 bits (148), Expect = 6.058e-9 Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0 Query: 115 KAPEVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDRGHGQKKKKKTLGEDVGGLDGTRGSSLPTACVSCSIM 206 +A +V+++RFICMG+GLL+D TL RIP F THPTP+NV + R + KK + +V + R ++ P C +C +M Sbjct: 44 RAQDVSQIRFICMGRGLLQDRQTLSSARIPSFPTHPTPINVVV------------RSNVLAAKKDSTARNVAAI---RTATSPIDC-NCVMM 119
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|325186448|emb|CCA20953.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 60.8474 bits (146), Expect = 1.332e-8 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0 Query: 111 PPRI-KAPEVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIR 158 PP + K V+++RFICMG+GLL+D TL RIP F THPTP+NV +R Sbjct: 42 PPDVPKVDNVSQIRFICMGRGLLQDRQTLSSARIPSFPTHPTPINVVVR 90
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|219119915|ref|XP_002180708.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408181|gb|EEC48116.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 62.3882 bits (150), Expect = 2.002e-8 Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 0 Query: 121 RLRFICMGQG-LLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDRGHGQK-KKKKTLGEDVGGLDGTRGSSLPT 198 R+R ICMG+G L+ DT TL++C+IP F THPTPVNVS+ P + HG+K +KK GG T + PT Sbjct: 124 RVRLICMGKGYLMPDTRTLEDCQIPVFKTHPTPVNVSVLPV----DNAVEEAHGKKDTRKKKESTHTGGHARTNAARSPT 199
BLAST of EWM30352.1 vs. NCBI_GenBank
Match: gi|675175633|ref|XP_008896701.1| (hypothetical protein PPTG_05006 [Phytophthora parasitica INRA-310] >gi|566011759|gb|ETI34670.1| hypothetical protein F443_18854 [Phytophthora parasitica P1569] >gi|567949285|gb|ETK75017.1| hypothetical protein L915_18316 [Phytophthora parasitica] >gi|567977946|gb|ETL28440.1| hypothetical protein L916_18223 [Phytophthora parasitica] >gi|568007451|gb|ETL81690.1| hypothetical protein L917_18041 [Phytophthora parasitica] >gi|568037309|gb|ETM34895.1| hypothetical protein L914_18127 [Phytophthora parasitica] >gi|568102441|gb|ETN17112.1| hypothetical protein PPTG_05006 [Phytophthora parasitica INRA-310] >gi|570315520|gb|ETO63468.1| hypothetical protein F444_18843 [Phytophthora parasitica P1976] >gi|570939313|gb|ETP04570.1| hypothetical protein F441_18697 [Phytophthora parasitica CJ01A1] >gi|570969576|gb|ETP32695.1| hypothetical protein F442_18670 [Phytophthora parasitica P10297] >gi|970618747|gb|KUF66795.1| hypothetical protein AM587_10013580 [Phytophthora nicotianae] >gi|970649273|gb|KUF88588.1| hypothetical protein AM587_10016020 [Phytophthora nicotianae]) HSP 1 Score: 58.9214 bits (141), Expect = 6.338e-8 Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 0 Query: 116 APEVARLRFICMGQGLLRDTCTLQECRIPCFDTHPTPVNVSIRPAPPRPPRHGDRGHGQKKKKKTLG 182 A + +R ICMG+G+L+DT TL +P FDTHPTPVNVS+ + R RGH K ++ G Sbjct: 50 AEDAKSVRLICMGRGILQDTHTLGSA-VPAFDTHPTPVNVSVFHKSQQAVREPTRGHATAKTVESAG 115 The following BLAST results are available for this feature:
BLAST of EWM30352.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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