EWM30277.1, cds429 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|585112936|gb|EWM30277.1| (protein of unknown function DUF4392 [Nannochloropsis gaditana]) HSP 1 Score: 714.916 bits (1844), Expect = 0.000e+0 Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0 Query: 1 MVSSASRIIYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTDQCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLGCEVGFVVAIERAGPARDGHYYTMRGRCMDTFVAPLEQLMSLTRPAIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMPGAVSLQMLRRLRETAREHVELMGERSEV 354 MVSSASRIIYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTDQCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLGCEVGFVVAIERAGPARDGHYYTMRGRCMDTFVAPLEQLMSLTRPAIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMPGAVSLQMLRRLRETAREHVELMGERSEV Sbjct: 1 MVSSASRIIYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTDQCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLGCEVGFVVAIERAGPARDGHYYTMRGRCMDTFVAPLEQLMSLTRPAIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMPGAVSLQMLRRLRETAREHVELMGERSEV 354
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|1072235763|gb|OEU20491.1| (hypothetical protein FRACYDRAFT_234119 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 216.853 bits (551), Expect = 1.742e-64 Identity = 135/343 (39.36%), Postives = 186/343 (54.23%), Query Frame = 0 Query: 3 SSASRIIYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSP--IAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTDQCNAAVIQAAVAADS-PYISASLQIETFPAKSEWTDVEICRLRRLGCEVGFVVAIERAGPARDGHYYTMRGRCMDT--FVAPLEQLMSLTRPAIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAA-EIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMPGAVSLQMLRRLRE 339 ++ S I +++ I+ D G RG+K LI P G+LE AA L R P + +L+GFPC + +PPTETDGPPG AI RA G ++TD CN AV AA+ S P + +ETFP+ E D E R R+ +++ ERAGP RDG YTMR M+ +APL + + + + IGDGGNELGMGK ++I+ + I + +I CV +L+AASVSNWGGYAL+ A A+V E+ ET D V +WVDR +P+ + L VA G RDG++G+ + VDGMP SLQ L+ +R+ Sbjct: 6 TTPSNIHEKIQAIIGTDAGDRGMKSLIVP-GDLEKAAETLGRLRPPSNVLVLSGFPCCVNESPPTETDGPPGTFAIARAAAAFGHIVTVVTDDCNKAVFAAALNGLSLPENCGKISVETFPSTFEICDEE--RFRKFAKICDLLISCERAGPGRDGKCYTMREIDMNEKGLIAPLHRFVEEVD--CKMISIGDGGNELGMGKVIDKIINNPKISNGQKIGCVVPADFLIAASVSNWGGYALAAASAMVHVDELNNNET-----------DSVP----------------KWVDRCLPTNEDEIALLDRCVAVGCRDGVSGKMESTVDGMPLETSLQCLQDIRK 316
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|224001736|ref|XP_002290540.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973962|gb|EED92292.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 201.445 bits (511), Expect = 2.172e-58 Identity = 122/348 (35.06%), Postives = 181/348 (52.01%), Query Frame = 0 Query: 9 IYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSP-------IAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTDQCNAAVIQAAVAA-------DSPYISASLQIETFPAKSEWTDVEICRLRRLGCEVGFVVAIERAGPARDGHYYTMRGRCMD--TFVAPLEQLMSLTRP-AIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMPGAVSLQMLRRLRE 339 I +++ + D G RG+K+L+ P G+L + + R S + IL+GFPC ++H PPTETDGPPGA +I A +GLG ++TD CN V +AA A + +Q+ FP + +D + L+ L ++A ERAGPA DG+ YTMR M+ + +APL ++ + R ++ L IGDGGNE+GMGK + + IP+ +++ VTA L+AASVSNWGGYAL+ A+V A E TG W ++ VP+E L V AG RDG++G++ VDGM + ++ LR +R+ Sbjct: 15 IDKIQATITTDPGKRGMKNLVVP-GDLLESGKIFARLQSKDPKSPPHVVILSGFPCCVDHDPPTETDGPPGAYSIALAAVGLGYRVTVVTDACNEKVFEAAREALLDGSLKNVEQADGLVQLVAFPGEHNMSDQDHDDLKVLAKSADLLIACERAGPAADGNCYTMRAINMNEKSLIAPLHLMVDVVRDNNVKFLAIGDGGNEMGMGKVIDAVY--QHIPNGAKVGAVTAADHLIAASVSNWGGYALAGVAALVRATDENATTGAGLLG--------------------------WTEKCVPTEEAELELLQRCVDAGCRDGVSGQKEATVDGMSASENMDYLREIRD 333
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|551645748|ref|XP_005825662.1| (hypothetical protein GUITHDRAFT_115230 [Guillardia theta CCMP2712] >gi|428169751|gb|EKX38682.1| hypothetical protein GUITHDRAFT_115230 [Guillardia theta CCMP2712]) HSP 1 Score: 184.882 bits (468), Expect = 2.165e-52 Identity = 130/345 (37.68%), Postives = 175/345 (50.72%), Query Frame = 0 Query: 9 IYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTDQCN-AAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLGCEVGFVVAIERAGPARDGHYYTMRGRCMDTFV--APLEQLMSLTRPAIESL---GIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMPGAVSLQMLRRLRETAREHVEL 347 + RLE D+GGRG+ L++ GELE A R+LQ + +AILTG+PC +PPTETDGPPGALAI RA + +GK +L+TD+ N ++ A Y + + +FP S E+ L C ++AIERAGPA DG YYTMRGR M V A LE L + T +SL G+GDGGNE+GMGK + + A +P +IAC L+ A VSNWGG+AL+ AL + ++ T P S E L M+AAGARDG+T VDGMP ++L+ + A + E+ Sbjct: 5 LQRLEEAAAEDKGGRGIGPLLR-EGELEEATRSLQHVRA-VAILTGYPCC-SSSPPTETDGPPGALAIARALMRMGKRVMLMTDEINREPIVAAEEEGRRSYGCDPVPVLSFPGGS-VNAQELVESLELDC----LIAIERAGPAEDGGYYTMRGRDMSLSVPIAKLESLFACTSKDGKSLVTIGVGDGGNEVGMGKRIKLV--RAHVPLGDKIACTVKADHLIVAGVSNWGGWALALALMIS----QQSHTDPHVLSLDGE----------------------------------KRILQAMIAAGARDGVTSSDQLSVDGMPWETHEELLKTMLSIASDEEEM 301
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|1173940530|gb|OQR89919.1| (hypothetical protein ACHHYP_05944 [Achlya hypogyna]) HSP 1 Score: 177.948 bits (450), Expect = 6.692e-48 Identity = 121/333 (36.34%), Postives = 166/333 (49.85%), Query Frame = 0 Query: 14 TIVQHDEGGRGLKDLI---QPAGELEMAARALQRA--SSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKT-CILLTDQCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLGCEVGFVVAIERAGPARDGHYYTMRGRCMDTFVAPLEQLMSLTRP-AIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMPGAVSLQMLRRLRE 339 ++V HD GGRG+ L+ + A AL R S +AILTGFPCLL++TPPTETDG GA A+I A +G+ +LTD+ NA V+++ + A + A+ + +FP +EWT +L L +G VAIERAG A DG YYTMR R M VAPL+Q + + I ++ IGDGGNELGMG A + + IA L+ A +S+WG YAL LA+ R+ D L+ E + M+AAGARDGI G + T VDG+P +L ++ +R Sbjct: 6 SLVHHDIGGRGMTHLLDGPRDRAHFSEAIEALSRLPPGSDVAILTGFPCLLDYTPPTETDGLGGACALIHALHVIGRHRAHILTDEVNAVVLKSCIEAAA---VAATVLHSFPPANEWTHATQVKLEALYSTMGAYVAIERAGAAEDGRYYTMRARDMTAIVAPLDQCFAYAKSHGIPTIAIGDGGNELGMGNV--SAATKAKVRNGETIAAKLGCDHLIVACISDWGAYALCAGLAL---------------------------------------RHRNSDALLTRET-VVAIANAMIAAGARDGILGCQDTFVDGLPLVETLNLVHAMRH 293
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|873233067|emb|CEM04142.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 172.94 bits (437), Expect = 4.376e-47 Identity = 136/365 (37.26%), Postives = 177/365 (48.49%), Query Frame = 0 Query: 12 LETIVQHDEGGRGLKDLIQPAGE--LEMAARAL-QRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACI-GLGKTCILLTDQCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEIC------------------------RLRRLGCEVGFVVAIERAGPARDGHYYTMRGRCMDTFVAPLEQLM--SLTRP--AIESL--GIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGY---ALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMPGAVSLQMLRRLRE 339 LE + Q DEGGRG++ L+ P + L +A L Q + ILTGFPC + PPTETDGPPGALA+ + + G + +LLTD N A + AAVAA PY+ +L + +S + E C RLR L E+ +VA+ER+G A DG YYTMRG M + VAPL+ L SLT P I L IGDGGNELG+GK R + IP ++IAC + L+ ASVSNWG Y AL+ AL V A G ++SF D L ++A + AG RDG T E VDG P + + + R+RE Sbjct: 23 LEHLTQKDEGGRGIRQLLGPETDDGLRRSAFLLSQPHVRRVGILTGFPCNRDSHPPTETDGPPGALAVAKCLLRGHKEAVVLLTDGINEAPLLAAVAA-HPYLHKALANKRLTVES-FHPAEFCENGSCIASVPLHKLADRRQLPGVRRLRALWEELDHLVAVERSGRAADGRYYTMRGLDMTSDVAPLDILFHWSLTGPQDGIRPLTTAIGDGGNELGLGKVAHRT--AQHIPKGAQIACAVSCHSLIVASVSNWGAYALAALTSALMVFA--------GDGSFSF---------------------------DELFTTDADERQVAAALCEAGVRDGATKELAMTVDGFPMHETFKRVDRMRE 348
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|1169024837|ref|XP_020464349.1| (UPF0317 protein C14orf159 homolog, mitochondrial [Monopterus albus]) HSP 1 Score: 170.244 bits (430), Expect = 5.426e-44 Identity = 121/327 (37.00%), Postives = 167/327 (51.07%), Query Frame = 0 Query: 9 IYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTD----QCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLGCE----VGFVVAIERAGPARDGHYYTMRGRCMDTFVAPLEQLMSLTR--PAIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGM 325 I LE I+ D G RG++ L+ EL + AL +SS +AI TGFP H+PP ETDGPPGA+AI + LGK ++TD + N A+I AV + ++ + TF + D + L G + +VAIER+G A DG+YY MRG + V P++ L + P I + GIGDGGNELGMGK E++ + +P+ S IAC +LLAA VSNWGGYA++C L ++ T P + +G G+ A W A +PS + S L +V G R G TG VDG+ Sbjct: 317 IRELEMIIGEDPGQRGIRALLV-QDELLHSCLALSHSSS-VAITTGFPTHYMHSPPDETDGPPGAIAIATMLLALGKQVTMVTDRRALEMNQAIIAEAVKTG--VLKTAIPLITF--EDSGPDSALHFLCHHGDQSKPRYDHLVAIERSGRAGDGNYYNMRGINIKHLVDPIDNLFIAAQDIPGITTTGIGDGGNELGMGKVKEKV--KSLMPNGSLIACDVPAFFLLAAGVSNWGGYAVACGLHLL-------HTCPSHQRYLKKGLGMEYTPAREQLQDWTAN--------LPSVDKEESFLSTLVRFGIRSGKTGHLAMEVDGL 620
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|974113357|ref|XP_015255988.1| (PREDICTED: UPF0317 protein C14orf159 homolog, mitochondrial isoform X1 [Cyprinodon variegatus]) HSP 1 Score: 167.933 bits (424), Expect = 3.157e-43 Identity = 123/351 (35.04%), Postives = 175/351 (49.86%), Query Frame = 0 Query: 1 MVSSAS-RIIYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTD----QCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLGC----EVGFVVAIERAGPARDGHYYTMRGRCMDTFVAPLEQLMSLTR--PAIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMP-GAVSLQMLRRLRE 339 +VS A+ I +LE ++ D G RG+K L+ EL ++ AL ASS +AI TGFP H+PP ETDGPPGA+AI + LGK LLTD + N A++ AV + A++ + T+ + D + L G ++AIER+G A DG+YY MR + V P++ L R P + + GIGDGGNELGMGK E++ +P IAC A + + A VSNWGGYA++C L ++ T P + G G+ P + W+ +PS + + LG + + G R G TG VDG+ M+ RL E Sbjct: 297 LVSKAAVEKIRQLERVIGDDPGQRGIKALLV-QDELLLSCLALSHASS-VAITTGFPTNYMHSPPDETDGPPGAIAIATMLLSLGKQVTLLTDSRATEMNGALVDEAVRTG--VLKAAIPLVTY--EDHGPDSALHFLCHHGNPRKPRFDHLLAIERSGRAEDGNYYNMREVNIKHLVDPIDDLFIAARNIPGVTTTGIGDGGNELGMGKVKEKV--KNLMPRGDVIACDVAADFAVTAGVSNWGGYAVACGLYLL-------NTCPAHQRYLRRGLGLQPLASDQQLQDWRTN--------LPSVQKEEAFLGTLQSFGIRSGKTGNLAMEVDGLTFHPTHSDMIHRLLE 624
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|974113359|ref|XP_015255989.1| (PREDICTED: UPF0317 protein C14orf159 homolog, mitochondrial isoform X2 [Cyprinodon variegatus]) HSP 1 Score: 167.162 bits (422), Expect = 5.389e-43 Identity = 123/351 (35.04%), Postives = 175/351 (49.86%), Query Frame = 0 Query: 1 MVSSAS-RIIYRLETIVQHDEGGRGLKDLIQPAGELEMAARALQRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTD----QCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLGC----EVGFVVAIERAGPARDGHYYTMRGRCMDTFVAPLEQLMSLTR--PAIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGMP-GAVSLQMLRRLRE 339 +VS A+ I +LE ++ D G RG+K L+ EL ++ AL ASS +AI TGFP H+PP ETDGPPGA+AI + LGK LLTD + N A++ AV + A++ + T+ + D + L G ++AIER+G A DG+YY MR + V P++ L R P + + GIGDGGNELGMGK E++ +P IAC A + + A VSNWGGYA++C L ++ T P + G G+ P + W+ +PS + + LG + + G R G TG VDG+ M+ RL E Sbjct: 286 LVSKAAVEKIRQLERVIGDDPGQRGIKALLV-QDELLLSCLALSHASS-VAITTGFPTNYMHSPPDETDGPPGAIAIATMLLSLGKQVTLLTDSRATEMNGALVDEAVRTG--VLKAAIPLVTY--EDHGPDSALHFLCHHGNPRKPRFDHLLAIERSGRAEDGNYYNMREVNIKHLVDPIDDLFIAARNIPGVTTTGIGDGGNELGMGKVKEKV--KNLMPRGDVIACDVAADFAVTAGVSNWGGYAVACGLYLL-------NTCPAHQRYLRRGLGLQPLASDQQLQDWRTN--------LPSVQKEEAFLGTLQSFGIRSGKTGNLAMEVDGLTFHPTHSDMIHRLLE 613
BLAST of EWM30277.1 vs. NCBI_GenBank
Match: gi|1079736454|ref|XP_018537447.1| (PREDICTED: LOW QUALITY PROTEIN: UPF0317 protein C14orf159 homolog, mitochondrial-like, partial [Lates calcarifer]) HSP 1 Score: 164.851 bits (416), Expect = 6.544e-43 Identity = 122/328 (37.20%), Postives = 169/328 (51.52%), Query Frame = 0 Query: 9 IYRLETIVQHDEGGRGLKDL-IQPAGELEMAARALQRASSPIAILTGFPCLLEHTPPTETDGPPGALAIIRACIGLGKTCILLTD----QCNAAVIQAAVAADSPYISASLQIETFPAKSEWTDVEICRLRRLG----CEVGFVVAIERAGPARDGHYYTMRGRCMDTFVAPLEQLMSLTR--PAIESLGIGDGGNELGMGKAWERIVGSASIPHASRIACVTATTWLLAASVSNWGGYALSCALAVVAAEIEEKETGPRTWSFTSEGDGVGPWKAGTDPDQWQARRNEWVDRLVPSEAQASSTLGGMVAAGARDGITGERTTRVDGM 325 I +LE I+ D G RG++ L +Q EL + AL +SS +AI TGFP H+PP ETDGPPGA+A+ + LGK ++TD + N A+I AV + ++ + TF + D + L G +VAIER+G A DG+YY MRG + V P++ L + P I + GIGDGGNELGMGK E++ + +P+ S IAC + A VSNWGGYA++CAL ++ T P + +G GV P Q Q + +W L PS + S L +V G R G TG VDG+ Sbjct: 166 IRQLEIIIGEDPGQRGIRALSVQ--DELLCSCLALSHSSS-VAITTGFPTHYMHSPPDETDGPPGAIAMATMLLALGKQVTMVTDRRAVEMNQAIIDEAVKTG--VLKTAIPLVTF--EDHGPDSALHFLCHHGDPNRPRYDHLVAIERSGRAEDGNYYNMRGVNIKHLVDPIDNLFIAAKNIPGITTTGIGDGGNELGMGKVKEKV--KSLMPNGSLIACDIPADNAVTAGVSNWGGYAVACALYLL-------HTCPSHQRYLRKGLGVEHI-----PPQEQLQ--DWTANL-PSVDKEESFLSTLVRFGIRSGKTGNLAMEVDGL 469 The following BLAST results are available for this feature:
BLAST of EWM30277.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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