|
|
Properties
| Property Name | Value |
|---|
| Product | 60s ribosomal protein l13a |
| Orig transcript id | gnl|cribi|Naga_100003g126.1737.mrna |
| Orig protein id | gnl|cribi|Naga_100003g126.1737 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:896065..901214 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna369 ID=rna369|Name=rna369|organism=Nannochloropsis gaditana|type=mRNA|length=576bp
GAACGCCACCGCACGGCCCGCCACCGTCACATGCCAGCTGGCGGTCCAGC
GAGCCTTCTGGATTTTGATGCTCTTCACCCACCACATCTGCATTTTGGGT
GATTGGAGAAAAAGAGAGGTATGTAAATAGAAACAATATGGGGCGAAAAC
GATTCATGACCATGCAGACAAGAAATTCACCGTTGCACACACACGGCATC
CTGAAATGCAGGAATACACAGCAAATGGACATCGCTTGGCGGTCCCTGTC
AGTGTCTCTTATGTTGCGATGGGCAAAGAAGGAAAAACGAAATTCAGGAG
ATAATATGGATGAAATTGGTTTGGTCTTTTTATATGTATCCTCCTTCGTA
CATTTACGTTTCCCAGTCTTCTTCTTTTTCTTTGTATTGTCGTGGCATGG
TTGCTTAAAACCTGTTGGCCCGAAAGAAGGAAACAAAAAGTCAAAGAGAG
CTATTCATGTCGTTGTTGCCAGGTGTAGCCATATTGCCAGGTTGTCTTAA
TCGTTGTGTTCATACGGGGACATACCACCTGCGAACCTGGTTGTCAAAAA
ATTTGTTTGCTCAGAGAAATGTTTTC back to topprotein sequence of rna369 >rna369-protein ID=rna369-protein|Name=rna369|organism=Nannochloropsis gaditana|type=polypeptide|length=213bp
MTFDSKEVVIDGRGHLLGRLSSIVAKELLSGQKVVVVRCEELMISGGLVR
NHTRYMQFLRKRTNTNPKRGPFHYRAPSRILWRTIRGMLPHKTFRGAQAL
ARLTTFEGIPAPYDTKKRVVVPQALKILRLKPGRRFCTLSRLAHEVGWGH
RDLVARLEAKRKIKAEAYYQQKKAGTAAKALAERKAASELSAVNNVLAGF
GYHVAPTPTAERI back to topmRNA from alignment at CM002455.1:896065..901214- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna369 ID=rna369|Name=rna369|organism=Nannochloropsis gaditana|type=mRNA|length=5150bp|location=Sequence derived from alignment at CM002455.1:896065..901214- (Nannochloropsis gaditana)
ATCAGTGGGACATGGCTTCACTCACTACATCAGCCAGCGCTTTGTATGTA
CTCACCCCGAAATAGTTAGGTCGTCCTTTCACCTAGTGCGAATACGAGAT
AAAATGTGCATTGAAGCAACACGCGGCGTTGATCTTATATCGAGAACTCT
CCAATAATAACCAAATCTATCAACCGCAGGCCTGGGGCATAATTTGCCCA
CTTCTGACAACAAACGACATGAAACTTTGCCGCGCATTCGTGTTTCTTTT
CCTCTTCGCATCTTTCGCCGACGCCTTTTTCAAGCCGTCCGTTGGCAGAA
GGTCACTTGAGCTAGGGGTAAGTATATCTTTTTCGGGTTCGGGACTTTTA
TTTACGTGTTATAGCTGCACGATTTAAACACGTACGAAAGCGCAACGAGT
GAGGTGAAAGATGTTTATTTAAAAATGATCTAGGAAAGAGGAACTTCGAA
GAGTAACGCATATTCATTAGACGACGCTTCTCGTTCATCTTTTTAGTCTA
AGATAAACACAAAAGTGGAATTGGAGAATCCCAAGGTTGTGACCATGACT
CAGCTTGCTCCTGGCGAGAAGAAGGTATTTTGCCGCTGCTGGTAAGTTGA
TGAAGGAGTAGACGTCAGTCAACGACAAAAAAATATATTCGATGTTATCA
TTCACGTGTGTATGCGTTTAATTTAAAATGTGAAAACAGGCAAAGCGGGA
CATTCCCATTGTGCGATGGCGCGCACATGAAGCATAATGAGGCCACTGGA
GACAATGTTGGGCCTCTCATTATCTCAAATCCGAAGCCAGCAACATAAGA
CATGATTTTTCATACCACCATACCGGGACCAGTTTTTGAAGAAATACCTC
AGGTTAACCGAAATGATGCTGTGCATGAAGATTTGATGATGGAGGGGAAC
ATAGCATATGACTTATACTGGGAAAACGTAAGCTCTGTGCTTGATCTTTT
TCGAATCCACTTTGCGTGACAGTTTGTGGAAATTTAACCTCACCTTTCGC
GAGGACCATTCCTCTTTTGCAAAAAACATTTGAACAAGTGTGACATGCCT
GATAACATGTGAATGACCAAAGTTTCTTTCAATTCTGAAGTGGTATAAAA
TTACTAAACAAGCTAATACATCGGTTCAATTGAATAAGGTTCATACTGGT
TCGTTCTTGTTTGCTTAGTTTTTGACTTTTGAGTCATATTCCACCAGTCA
CCTTGAGTACCACAGGCGTCGATCACGCAGCGGTAAATATTATAGCTCAC
TTCAAAGGGTTGATGCATTCAATGCACCACCTCTGCAAACCATATTATAA
GCTAGGGCTGCGGTCAAAAGTGCGTGGCCGCTCGAACACCGCCAGCACTT
GTGAAAGATATATCTTCAGTCTCGCAAATCGTGAACCTGTCTTCAAATGT
GTGAGAGGCGGACACCCTGGCAGCGTTCTAGAGCATTTTTTCCTGGAAGT
GGCGGTGAGAGCACGGTGGTCACAGGCAAACAAGCAGGGTTTTTCATGGA
ATAAGTAAGTGGCTTTTGTGGTGCTGAGTTGCCAGGCGCGACCGAGGCAG
GAGCTGAGGCGTGCAATCTCCGAGGGGCAAGGGTGCCATTCGTCCCACAA
AATGGTTGAAAATGCACGGGTGAGTGCAGTGTATGCTGAGAGGTCAGCTC
AGGGTGTACATGTCGCCTTGCGACGTCAAAAGGCGGGGTCACTGAAGATT
GTAGTGACTTCTGACAAATTCATTTCTGTGGGTGTACTGGACGATAACTT
CGCTTTGGTGGCGCGCTCTTTAAGGCGCGGGAACTGCATCGGCTTTTTCC
ATTGAGCTATTAGACATTGAGTTGAGAGCAAAACGCAAACTCGCTGACGA
CTCTTGAGCTCTTCGTGGTCCTCATGCTGTACTCCTACACGGCTTCCGAC
TTCTGACCTCGGGACGATACACGGGAATCAAAAAGTACAAACTGCGGTTG
CTGACAGCGTCTCGTTCTGATGTGAGGGCATGACGAAAACAAGTTAAGGT
TTAAAGGTGGGTTGCAGATCCAGGGCGGAATCTAAGTGGCCGAGAGGAGA
AGGAGCTTGATAAAATAAGTAATACAAAATAACCCGGGTAAACATTGGCA
GATTTCTCGGCCATCTTCTCAGTTGATGCGAAGCCTGGTAGACAGTGGTA
TGAGGAAAAAGCAAAAGGGGATAGCGACATGCGAATTCGCATGTTGGCAT
GTTACCTCATGTAGTCAGTGGGCTTCACTCAATTTCTCAAGCACGCGCTT
TTCCAGGGCTGCGAGTGCAGATTGGTGTCCATCCGATACGGGTAGGCTGG
AGCTGACAAATATCTGCTGCCCTGTCCGACTCGCAAGCCGGATGGCCATG
GATTGAGCCTGATCATTGTCTGGCGCGTCACGCAGCAGAGTAGATGTGAC
AGGGAGCGTATCGTACGGAGTCAGGGTTGCTACACACAAAGAGCCCATAA
GCGGGACGTTGCTCTTCTCTCCAAACCAAATGAAACAACATCCGTTTCCT
ATCAACACATGCATAACAATGACTGAATCAAGATCTTCTCTTTCCTCTGT
CTCCGTGTATAGTTGCATGCTTTGAAGATCCTGATGAGATGATGCTGTGA
AACAATTGTGAAGGAAACCGCGTTAGACCCATTAACTGAATCCTCCCGAA
AAAAAGCTTTTCTTCAGCCAAAGATCTTGATAAGCATACGTAACTTGGTT
TTGGCGAGAATCACACGAGGGATGCACGCTGAAGCGGGGCCGATAAGCCA
CACACAAATCAAACCAATACACTACATCGAAACATTCAAAGAAGTAAAGC
GAAAAGTCACACACATTGGCTAGGAGTAAGTATACGTGCTTGACAGGGGT
TTCTGTGCCGGGTAAACATGAGATGAGAAGCCGGGCGTGGACACGTACTA
CTCGTCGTTTATCCCTCAGGATGTGAAGGCCGGGGGATTGCTTGTGGTGG
GAGTGAGGACAAGTACGCGAATATAACACTTGTGATGCCGTCGCCCAGAA
AAGCAGTGATGTGATGAAAACTGCCGTGGATTTTTTGGACGTGTGCAAAG
GTGGAAAGCAATTTGGCAGGTCAGCGGCGGTATTTCGAGGGGCGGGCGCC
GTAATAGGAGAGAGTACGGGCGCGAGCGGCAGTGGGTGGTCGAGCGATGG
CGAGGCGAGGGGGTTCGTGTGGATGGACAGAGCAACAAGCAAACGCATAT
CGTTCCCGAGCTCTTGTGCATCTCAGCTCGAAATACATAGATCACACACG
TTGAATGTTTGCGGAAAGTAGATATAGGGGGGAGGGGGGGGTTGTTTTGA
TAGTGTCATCCATCCCCGCCGCTACTCCAAGCTTTCTTCATGTTTGTATC
CCATCAAATCCTAGACTGATCAGCCACTTCTCTTCACACAGTTTTTTCCA
GGATGACCTTCGATTCGAAAGAGGTAGTCATTGATGGCCGTGGACATTTG
CTTGGTCGGTTGTCTTCAATTGTGGCCAAGGAATTGCTTTCGGGTCAGAA
AGTTGTGGTAGTACGATGTGAGGAGCTCATGATCTCAGGGGGTCTTGTGC
GTAACCACACCCGATACATGCAATTTCTGCGCAAGCGCACGAATACAAAT
CCCAAGCGCGGCCCCTTCCACTATCGGGCTCCGTCTCGCATCCTTTGGCG
CACAATTCGCGGGATGTTGCCCCACAAGACTTTCCGTGGTGCCCAGGCTC
TCGCAAGACTCACGGTGCGTACACTTTGACCGGGTGCATCGTGGAGATGT
GAAAATATCTCACTCCCCTAGACATGTAACCTAGTTTATACTTGGATGGA
GGTGAGAGAGGATGCGCGGGGGTTTTCCAGGACCTCGTCGCCTGAAGGGC
GTCAGTCGAGAAATGGCTTGAAATGAAAGTGAAGCACCAAAGCCCTTCCA
GCATGTTTCTTCGTTGTGCGTGAGCAACGCAGAAATAGAAATTAGATTTT
TGAATCCGTAGTGACTCGAGTAAATCTTCTTTCATGCAAACAGACTTTCG
AGGGCATTCCCGCGCCTTATGATACGAAAAAGCGAGTGGTGGTGCCACAA
GCCCTCAAAATCCTTCGTCTGAAACCTGGACGTCGCTTCTGCACACTGAG
TCGGCTAGCGCACGAGGTAGGATGGGGTCATCGTGACTTGGTTGCGCGCT
TGGAGGCGAAGCGAAAGATCAAGGCTGAGGCCTACTACCAGCAGAAGAAG
GCTGGCACTGCTGCGAAAGCCCTTGCTGAGCGCAAAGCTGCATCTGAGCT
AAGCGCGGTGAATAATGTACTCGCTGGCTTCGGTTATCATGTTGCCCCCA
CCCCCACCGCTGAGCGTATTTGAATTTTAGAAACGATGCAGCAAGAGGGC
CCCCCGCGAAGACAAGGGGAGTGAAAGAGACCTCGTTAGCCTTTCGCAAC
TCATCAAAGTCTTCCAGTTTTACGTCCGCGAGGTGTTCTCTATGTCAGGC
ATCACGCGCACACCTGATAGCCATTCTTGAACTCTTGATTCTGGAGGCGT
GCGTAGAGAGCGAAAGAAACCTCACAGATCGGCTTAACGAGGAAGGGGGA
CTCACTAAAAGCAACAAGGAGCACGTGGTGACGAAGGATTGATAGCGGAA
ATTAATTGCGTCGGCGGTAACAATGCTAATGTTGTACCGTTATATGTCTC
TATGTTTCTTTGTAGCTGTAGCTGGCTAAGGATGGAGGAAATTCTGCTTA
GAAAACATTGCCGACAAGTGCATGACAGGGAAAAGCTTTGAACCTAACTT
GTGTTGCTCAAGACATGTGTACGGAACGGCCCCTTCTGAGCAAGTAGTCA
CTTTGAGTGTCCCGGTGCTTCACCTATTTACATCGCGTGACCAGGTGGGC
CGTGTTTGTTTTTTCCAGGAGCTTCGGGCTTCTTGACTTTCAACGGCTTC
ACCCAGAGACGGATTTGCCATGCGGTGAGATGTCATAGTTTCTTAAAGTA
TCTAACGAGTAGCTTGCTGTGTGCATATCGGAGCGTGGGAAGAATCTGAC
ACCAGAAAGCGTGGAGTCATGCTGGAAGTTATTACCTCTCGCTGAGGATC
ACGATTAAAATAGATAACAAGGTCCTAAAAGAATATATCGGACACCGCAG
GGCATCTCACTGCATGAAGTCAATCAAGAGGTCGAACGGAAATATAAAGG
back to topCoding sequence (CDS) from alignment at CM002455.1:896065..901214- >rna369 ID=rna369|Name=rna369|organism=Nannochloropsis gaditana|type=CDS|length=1284bp|location=Sequence derived from alignment at CM002455.1:896065..901214- (Nannochloropsis gaditana)
ACTTTCGAGGGCATTCCCGCGCCTTATGATACGAAAAAGCGAGTGGTGGT
GCCACAAGCCCTCAAAATCCTTCGTCTGAAACCTGGACGTCGCTTCTGCA
CACTGAGTCGGCTAGCGCACGAGGTAGGATGGGGTCATCGTGACTTGGTT
GCGCGCTTGGAGGCGAAGCGAAAGATCAAGGCTGAGGCCTACTACCAGCA
GAAGAAGGCTGGCACTGCTGCGAAAGCCCTTGCTGAGCGCAAAGCTGCAT
CTGAGCTAAGCGCGGTGAATAATGTACTCGCTGGCTTCGGTTATCATGTT
GCCCCCACCCCCACCGCTGAGCGTATTTGAATGACCTTCGATTCGAAAGA
GGTAGTCATTGATGGCCGTGGACATTTGCTTGGTCGGTTGTCTTCAATTG
TGGCCAAGGAATTGCTTTCGGGTCAGAAAGTTGTGGTAGTACGATGTGAG
GAGCTCATGATCTCAGGGGGTCTTGTGCGTAACCACACCCGATACATGCA
ATTTCTGCGCAAGCGCACGAATACAAATCCCAAGCGCGGCCCCTTCCACT
ATCGGGCTCCGTCTCGCATCCTTTGGCGCACAATTCGCGGGATGTTGCCC
CACAAGACTTTCCGTGGTGCCCAGGCTCTCGCAAGACTCACGACTTTCGA
GGGCATTCCCGCGCCTTATGATACGAAAAAGCGAGTGGTGGTGCCACAAG
CCCTCAAAATCCTTCGTCTGAAACCTGGACGTCGCTTCTGCACACTGAGT
CGGCTAGCGCACGAGGTAGGATGGGGTCATCGTGACTTGGTTGCGCGCTT
GGAGGCGAAGCGAAAGATCAAGGCTGAGGCCTACTACCAGCAGAAGAAGG
CTGGCACTGCTGCGAAAGCCCTTGCTGAGCGCAAAGCTGCATCTGAGCTA
AGCGCGGTGAATAATGTACTCGCTGGCTTCGGTTATCATGTTGCCCCCAC
CCCCACCGCTGAGCGTATTTGAATGACCTTCGATTCGAAAGAGGTAGTCA
TTGATGGCCGTGGACATTTGCTTGGTCGGTTGTCTTCAATTGTGGCCAAG
GAATTGCTTTCGGGTCAGAAAGTTGTGGTAGTACGATGTGAGGAGCTCAT
GATCTCAGGGGGTCTTGTGCGTAACCACACCCGATACATGCAATTTCTGC
GCAAGCGCACGAATACAAATCCCAAGCGCGGCCCCTTCCACTATCGGGCT
CCGTCTCGCATCCTTTGGCGCACAATTCGCGGGATGTTGCCCCACAAGAC
TTTCCGTGGTGCCCAGGCTCTCGCAAGACTCACG back to top
|