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Properties
| Property Name | Value |
|---|
| Product | proteasome subunit alpha |
| Orig transcript id | gnl|cribi|Naga_100026g35.10627.mrna |
| Orig protein id | gnl|cribi|Naga_100026g35.10627 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:706843..708660 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna281 ID=rna281|Name=rna281|organism=Nannochloropsis gaditana|type=mRNA|length=929bp
CCGGGAACTCTGACCACGATCCGCCCCTTACACCCCCCTGCCCCTTCTCC
TTTTTGACCTTGCCCAGCGGACGCATTCCTTCCCTCCGTCACCGGGCCTC
TCCGCGTCTTCCTTGGGGCCTCGGCGGCCCTCCTGGCCGGCCTCTTCTTC
GGCGCCTCCTTCAACCCCTCCTACCACATCATGGACCGCGCCGCCGAGCC
TGACTCCTCTTTCGCCAGATATCAAGACCTGCAAATGCTTGACTTCGTCT
TCGCACACTTTTCCGGGATATTCTTGGCCTCGTCCAGCTTTTTCCTTCTC
GCCCTCCTCCTCCACGCCCTGGCAGGCGCCTACTCCCGCCGAGGAGGCAA
GAAGGGCCCCTCGGGCTTTTCCCCCACTGCCTTCAGGCCCTTCGAGCTCT
ACCCCGCCGCCCTGCTCCCCGCCTTCCTCGCGGGCCTCGTGTGGGCGGTC
GCCATGGTCGCCTGGTTTGTCGCCAACCAGCGCCTCACCTCTCTGGCCGT
CACCTTCCCCATCATAACCGCCACGCCGGGGCTGGTCGCCTCCCTCTGGG
GCGTTGTGGTCTTCGGGGAGATCAGGGGCAGGCGGAACCTGGGCGTGTTG
GCGGCGGCCTTTGGCCTGACCGCCACCTCTTGCGGTCTGATAGCCGCGTC
CAGGTAGGCCCCCTGGGGCTGGGGACGAGGCAGCTGACACCACAGTGGGC
AGATGGGTGAGATGGCTGGAAAGTCGGGATCAGACGCTGTGGCTGTCAAT
CAGCCGCTTCGCGGGCCCGTCAGAAAAACAGGGCACGAAAAGCAGGCGAT
ATCTTTTCACGATCGTTTCCGTTGGTACCGCGCATTTCTTTTGTGATTGC
TTCTAGTTATAAATTCGATCTGATATGCAATGGATAGGCAGTGAAGCACG
TTTACTGGCTTTACTGGGCACCTCAAGCC back to topprotein sequence of rna281 >rna281-protein ID=rna281-protein|Name=rna281|organism=Nannochloropsis gaditana|type=polypeptide|length=176bp
MQGRRRPYGSSILIAGLLEETPDPATKSNKQLFPRIYKTDPSGTFTLWKA
CAVGRGAETAMTVLEEKYEPDMDLRDALKLSLDCCRALLENGGVIGEEVN
KGKEDKSEVERSQQGGSEETGAAREEKGDRARVGVDVALVSNEGVALWES
ISPMEEILELVNRSDANAAVASSKEK back to topmRNA from alignment at CM002455.1:706843..708660- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna281 ID=rna281|Name=rna281|organism=Nannochloropsis gaditana|type=mRNA|length=1818bp|location=Sequence derived from alignment at CM002455.1:706843..708660- (Nannochloropsis gaditana)
AAGGATAGCAACCTCTTCGGAAGTTCTGACGCCGGCGTCGGGGATGCTCA
CGAGGCTCGAGATCTACGGCACCTCGATTAACCTCCCCAAGGTCCTCCTC
CTTGTCCTCGTCAACTTAATATGGTCATCTGGAACTTTCGCCGAAAGCTT
CAGCCCTATCAGTCCTCTAACACGCTTTGATGCCAAGGGTCAATTGCCTC
AAAGTGATGCTGCTGCTCGAGCTGTGTCAAGAGGGGCTCCTCTCATCGCG
CTCTCTCTCGGAGAGGCGATATTGTTGGTTGCGCCGAGGTGAGAATGGCA
TACGGGCGGAGTGCCCACAGAGGCCAGTAACATTATCTGAGTCCAATTGA
GCCTGTCAAATTGAACGAGAGGATTACGAAATAATTTCATTGGCATAGAG
GTGTTGTGGAGAGGGTTAATTGTCAAGAAAGAGTGCCTGACGTGAGGGAC
ATCAGTGGAAGATGACGAACCTCATATGGAGAGGACCACAGGGGTAATCC
CGACACTCTGTCTTATCCTTTTTTCATTTTTAATTACATTCCCTCGCGGT
CACCAAGTGAAAGACAGCCTCTATCCCTTGTTGAGGGAGGCGGTCTTCCG
AAGCTCTGGCGGTTGACTAAAGGCATATGCCTGAGTCACGTAGGCCTTAG
ACAAGACAGTCGCACACTTCTCCTCGCCGCCCAACAAGCCGCAGCCGATT
ATGAAAACCGTTTTGGAGAGGACATTCCTGTGGCTGAGGTTGTGGAAATA
ATTGCCGCCAAGCAGCAGGAAGCCACGATGCAAGGACGGCGCCGCCCGTA
CGGATCCAGTATCCTTATTGCAGGGTTGCTAGAGGAGACCCCAGACCCCG
CCACCAAGAGCAACAAGCAGCTTTTCCCGCGCATTTATAAAACAGATCCC
TCGGGCACTTTCACTCTTTGGAAGGCCTGCGCCGTTGGGCGGGGCGCGGA
GACAGCCATGACCGTCCTGGAGGAAAAGTACGAGCCCGACATGGATCTTC
GAGACGCTTTGAAGCTTTCCCTCGACTGCTGCCGGGCTCTGTTGGAAAAT
GGCGGTGTTATAGGAGAGGAGGTAAACAAAGGGAAGGAGGATAAAAGCGA
GGTGGAAAGAAGTCAGCAGGGCGGGAGCGAGGAGACGGGGGCGGCGCGCG
AAGAGAAGGGAGATCGAGCGCGCGTGGGAGTGGACGTTGCCCTGGTTTCC
AATGAGGGTGTGGCACTATGGGAGTCCATATCACCTATGGAAGAGATACT
CGAGCTTGTCAATAGAAGGTGAGCTGGCAAGAGGAATGACAGTCACATGC
TCTAAGAGAACGATGACAGAGATAATTTGTTTTTTTTAATCTGTGACATT
ACAGAATACCCCAAGAGCCTTTTGAAGGCTATATCTTTACAGTCACGAAA
TTATCAATCCTTATTTCAAAGTCTGAAGTAATTTTCGTAATCAACCACAA
TGGACGACACAGTGACGCCAACGCAGCAGTCGCTTCTTCAAAGGAGAAGT
AGGTGGAAGTCCGATGCGAATGTCAGTTGGCTGATCAGAACAGTCGCCTC
CTCTTCAGGTCTCAAGTCACACTTTAAAATGTGATTGGAGTGTAATGCGG
AGGAAAGCAAGTGGAGACAGGGCAAGAATTGTTCCGAAAGTCATCCTCTG
TTTCGCCTCGTCTGGGAACATATCTTTGCAGAAACTCGGAAATGAGGATC
ACTATTCAGCCACTAACCATTGTTAGGTTCTACAGAATATTTAAGTCACA
GGCATAATATTTATGGCACGGTTTTGTAGTCACTCGCAAAGTACAATTGC
TGCCGTCGAGGCAAACTC back to topCoding sequence (CDS) from alignment at CM002455.1:706843..708660- >rna281 ID=rna281|Name=rna281|organism=Nannochloropsis gaditana|type=CDS|length=1062bp|location=Sequence derived from alignment at CM002455.1:706843..708660- (Nannochloropsis gaditana)
TGACGCCAACGCAGCAGTCGCTTCTTCAAAGGAGAAGTAGATGCAAGGAC
GGCGCCGCCCGTACGGATCCAGTATCCTTATTGCAGGGTTGCTAGAGGAG
ACCCCAGACCCCGCCACCAAGAGCAACAAGCAGCTTTTCCCGCGCATTTA
TAAAACAGATCCCTCGGGCACTTTCACTCTTTGGAAGGCCTGCGCCGTTG
GGCGGGGCGCGGAGACAGCCATGACCGTCCTGGAGGAAAAGTACGAGCCC
GACATGGATCTTCGAGACGCTTTGAAGCTTTCCCTCGACTGCTGCCGGGC
TCTGTTGGAAAATGGCGGTGTTATAGGAGAGGAGGTAAACAAAGGGAAGG
AGGATAAAAGCGAGGTGGAAAGAAGTCAGCAGGGCGGGAGCGAGGAGACG
GGGGCGGCGCGCGAAGAGAAGGGAGATCGAGCGCGCGTGGGAGTGGACGT
TGCCCTGGTTTCCAATGAGGGTGTGGCACTATGGGAGTCCATATCACCTA
TGGAAGAGATACTCGAGCTTGTCAATAGAAGTGACGCCAACGCAGCAGTC
GCTTCTTCAAAGGAGAAGTAGATGCAAGGACGGCGCCGCCCGTACGGATC
CAGTATCCTTATTGCAGGGTTGCTAGAGGAGACCCCAGACCCCGCCACCA
AGAGCAACAAGCAGCTTTTCCCGCGCATTTATAAAACAGATCCCTCGGGC
ACTTTCACTCTTTGGAAGGCCTGCGCCGTTGGGCGGGGCGCGGAGACAGC
CATGACCGTCCTGGAGGAAAAGTACGAGCCCGACATGGATCTTCGAGACG
CTTTGAAGCTTTCCCTCGACTGCTGCCGGGCTCTGTTGGAAAATGGCGGT
GTTATAGGAGAGGAGGTAAACAAAGGGAAGGAGGATAAAAGCGAGGTGGA
AAGAAGTCAGCAGGGCGGGAGCGAGGAGACGGGGGCGGCGCGCGAAGAGA
AGGGAGATCGAGCGCGCGTGGGAGTGGACGTTGCCCTGGTTTCCAATGAG
GGTGTGGCACTATGGGAGTCCATATCACCTATGGAAGAGATACTCGAGCT
TGTCAATAGAAG back to top
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