EWM30376.1, cds278 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|585113036|gb|EWM30376.1| (iron-sulfur cluster scaffold protein nfu-like protein [Nannochloropsis gaditana]) HSP 1 Score: 615.535 bits (1586), Expect = 0.000e+0 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0 Query: 1 MRRIWPAFAKPLNAVTWESAAFACPRSLNSLRVLHRTTRRQASNLRKSSSHLAANYMWPSSASRTSGLAVPGHIQWRSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPSAE 296 MRRIWPAFAKPLNAVTWESAAFACPRSLNSLRVLHRTTRRQASNLRKSSSHLAANYMWPSSASRTSGLAVPGHIQWRSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPSAE Sbjct: 1 MRRIWPAFAKPLNAVTWESAAFACPRSLNSLRVLHRTTRRQASNLRKSSSHLAANYMWPSSASRTSGLAVPGHIQWRSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPSAE 296
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|553181372|ref|XP_005853554.1| (iron-sulfur cluster scaffold protein nfu-like protein [Nannochloropsis gaditana CCMP526] >gi|422295504|gb|EKU22803.1| iron-sulfur cluster scaffold protein nfu-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0 Identity = 275/277 (99.28%), Postives = 275/277 (99.28%), Query Frame = 0 Query: 1 MRRIWPAFAKPLNAVTWESAAFACPRSLNSLRVLHRTTRRQASNLRKSSSHLAANYMWPSSASRTSGLAVPGHIQWRSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNE 277 MRRIWPAFAKPLNAVTWESAAFAC RSLNSLRVLHRTTRRQASNLRKSSSHLAANYMWPSSASRTSGLAVPGHIQ RSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNE Sbjct: 1 MRRIWPAFAKPLNAVTWESAAFACRRSLNSLRVLHRTTRRQASNLRKSSSHLAANYMWPSSASRTSGLAVPGHIQRRSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNE 277
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|675179575|ref|XP_008898672.1| (hypothetical protein PPTG_06497 [Phytophthora parasitica INRA-310] >gi|568101647|gb|ETN16333.1| hypothetical protein PPTG_06497 [Phytophthora parasitica INRA-310] >gi|570966045|gb|ETP29164.1| hypothetical protein F442_21649 [Phytophthora parasitica P10297]) HSP 1 Score: 298.901 bits (764), Expect = 5.339e-98 Identity = 150/270 (55.56%), Postives = 194/270 (71.85%), Query Frame = 0 Query: 25 PRSLNSLRVLHRTTRRQASNLRKSSSHLAANYMWPSSASRTSGLAVPGHIQWRSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPS 294 PRS LR L R + +S R +H A + +R + + + RSMFIQTE TPNP S+K++PG VLD+++ TG+ F EV RSPLAKKL +IEGV VF G+ FI++TK+ W LN EIFAT+MD +A ++SD I++DTTIL DDEVVAM+KEL+E RIRP+VQ+DGGDIFY+GFD ++G+V V+LAGSC+GCPSS+VTLK+GVENML HYIPEV+GI + D+ELNAVNE+E +TLEE+L GIPS Sbjct: 16 PRSRQLLRALARRSA-ASSATRFVHAHPVAGRAAAALQTRATSPFLARNGALRSMFIQTEPTPNPLSVKFLPGRTVLDDRFTTGVDFTPSSEEVRRSPLAKKLFQIEGVTRVFFGKDFISVTKTEDEDWDALNAEIFATIMDFFASDEQVMSDEPIITDTTILPDDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGMVLVQLAGSCAGCPSSSVTLKHGVENMLKHYIPEVRGIEEWVDEELNAVNEKEFRTLEEKLRSVGIPS 284
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|1214707867|gb|OWZ19213.1| (Iron-sulfur cluster scaffold protein [Phytophthora megakarya]) HSP 1 Score: 292.352 bits (747), Expect = 1.666e-96 Identity = 139/216 (64.35%), Postives = 174/216 (80.56%), Query Frame = 0 Query: 79 MFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPS 294 MFIQTE TPNP+S+K++PG VLDE++ TG+ F EV RSPLAKKL +IEGV VF G+ FI++TK+ W LN EIFAT+MD +A ++SD IV+DTTIL DDEVVAM+KEL+E RIRP+VQ+DGGDIFY+GFD ++GLVSV+LAGSC+GCPSS+VTLK+GVENML HYIPEV+GI + D+ELNAVN++E +TLEE+L GIPS Sbjct: 1 MFIQTEPTPNPQSVKFLPGRTVLDERFTTGVDFTPNSDEVRRSPLAKKLFQIEGVTRVFFGKEFISVTKTEDEDWDALNAEIFATIMDFFASDEEVMSDEPIVTDTTILPEDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGLVSVQLAGSCAGCPSSSVTLKHGVENMLKHYIPEVRGIEEWVDEELNAVNDKEFRTLEEKLRSVGIPS 216
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|953494830|emb|CEG43471.1| (iron-sulfur cluster scaffold protein nfu-like protein [Plasmopara halstedii]) HSP 1 Score: 292.738 bits (748), Expect = 8.539e-96 Identity = 137/218 (62.84%), Postives = 176/218 (80.73%), Query Frame = 0 Query: 77 RSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPS 294 RSMFIQTESTPNP+S+K++PG VLD+++ TG+ F EV RSPLAKKL +IEGV VF G+ FI+ITK W LN EIFAT+MD +A ++SD +++DTTIL DDEVVAM+KEL+E RIRP+VQ+DGGDIFY+GF+ ++G+VSV+LAGSC+GCPSS+VTLK+GVENML HYIPEV+GI + D+ELNAVNE+E ++LE++L GIPS Sbjct: 54 RSMFIQTESTPNPQSVKFLPGRAVLDDRFTTGVDFTPSSEEVRRSPLAKKLFQIEGVSRVFFGKDFISITKLDDEDWDALNAEIFATIMDFFASNEEVMSDEPVITDTTILPDDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFNEKTGMVSVQLAGSCAGCPSSSVTLKHGVENMLKHYIPEVRGIEEWVDEELNAVNEKEFRSLEDKLRSVGIPS 271
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|566008296|gb|ETI31207.1| (hypothetical protein F443_21791 [Phytophthora parasitica P1569] >gi|567945796|gb|ETK71607.1| hypothetical protein L915_21184 [Phytophthora parasitica] >gi|567974454|gb|ETL25048.1| hypothetical protein L916_21056 [Phytophthora parasitica] >gi|568003922|gb|ETL78261.1| hypothetical protein L917_20912 [Phytophthora parasitica] >gi|568033833|gb|ETM31525.1| hypothetical protein L914_20926 [Phytophthora parasitica] >gi|570311981|gb|ETO59929.1| hypothetical protein F444_21813 [Phytophthora parasitica P1976] >gi|570935769|gb|ETP01026.1| hypothetical protein F441_21672 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 291.967 bits (746), Expect = 2.082e-95 Identity = 138/218 (63.30%), Postives = 174/218 (79.82%), Query Frame = 0 Query: 77 RSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPS 294 RSMFIQTE TPNP S+K++PG VLD+++ TG+ F EV RSPLAKKL +IEGV VF G+ FI++TK+ W LN EIFAT+MD +A ++SD I++DTTIL DDEVVAM+KEL+E RIRP+VQ+DGGDIFY+GFD ++G+V V+LAGSC+GCPSS+VTLK+GVENML HYIPEV+GI + D+ELNAVNE+E +TLEE+L GIPS Sbjct: 67 RSMFIQTEPTPNPLSVKFLPGRTVLDDRFTTGVDFTPSSEEVRRSPLAKKLFQIEGVTRVFFGKDFISVTKTEDEDWDALNAEIFATIMDFFASDEQVMSDEPIITDTTILPDDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGMVLVQLAGSCAGCPSSSVTLKHGVENMLKHYIPEVRGIEEWVDEELNAVNEKEFRTLEEKLRSVGIPS 284
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|301107396|ref|XP_002902780.1| (iron-sulfur cluster scaffold protein Nfu-like protein [Phytophthora infestans T30-4] >gi|262097898|gb|EEY55950.1| iron-sulfur cluster scaffold protein Nfu-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 288.115 bits (736), Expect = 7.297e-95 Identity = 138/216 (63.89%), Postives = 172/216 (79.63%), Query Frame = 0 Query: 79 MFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPS 294 MFIQTE TPNP S+K++PG VLDE++ TG+ F EV RSPLAKKL +IEGV VF G+ FI++TK+ W LN EIFAT+MD +A ++SD IV+DTTIL DDEVVAM+KEL+E RIRP+VQ+DGGDIFY+GFD ++G VSV+LAGSC+GCPSS+VTLK+GVENML HYIPEV+GI + D+ELNAVN++E +TLEE+L GIPS Sbjct: 1 MFIQTEPTPNPLSVKFLPGRSVLDERFTTGVDFTPSSEEVRRSPLAKKLFQIEGVTRVFFGKDFISVTKTEEEDWDALNAEIFATIMDFFASDEQVMSDEPIVTDTTILPDDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGTVSVQLAGSCAGCPSSSVTLKHGVENMLKHYIPEVRGIEEWVDEELNAVNDKEFRTLEEKLRSVGIPS 216
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|695443576|ref|XP_009533734.1| (hypothetical protein PHYSODRAFT_317963 [Phytophthora sojae] >gi|348671168|gb|EGZ10989.1| hypothetical protein PHYSODRAFT_317963 [Phytophthora sojae]) HSP 1 Score: 288.115 bits (736), Expect = 7.297e-95 Identity = 136/216 (62.96%), Postives = 172/216 (79.63%), Query Frame = 0 Query: 79 MFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPS 294 MFIQTE TPNP S+K++PG VLD+++ TG+ F EV RSPLAKK+ +IEGV VF G+ FI++TK+ W LN EIFAT+MD +A ++SD IV+DTTIL DDEVVAM+KEL+E RIRP+VQ+DGGDIFY+GFD ++GLV V+LAGSC+GCPSS+VTLK+GVENML HYIPEV+GI + D+ELNA+NE+E +TLEE+L GIPS Sbjct: 1 MFIQTEPTPNPLSVKFLPGRAVLDDRFTTGVDFTPNSEEVRRSPLAKKMFQIEGVTRVFFGKDFISVTKTEDEDWDALNAEIFATIMDFFASDEEVMSDEPIVTDTTILPEDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGLVQVQLAGSCAGCPSSSVTLKHGVENMLKHYIPEVRGIEEWVDEELNAINEKEFKTLEEKLRSVGIPS 216
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|669152050|ref|XP_008611587.1| (Fe/S biogenesis protein NfuA [Saprolegnia diclina VS20] >gi|530736473|gb|EQC34715.1| Fe/S biogenesis protein NfuA [Saprolegnia diclina VS20]) HSP 1 Score: 277.715 bits (709), Expect = 5.115e-90 Identity = 145/230 (63.04%), Postives = 181/230 (78.70%), Query Frame = 0 Query: 65 TSGLAVPGHIQWRSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPS 294 T+ AVP RSMFIQTE+TPNP S+K++PG VLDE++ TG+ F EV +S LAK+L I GV VF G+ FI++TK+ W L +IFAT+MD YA G I+SD +++DTTILD DDEVVAM+KEL+E+RIRPAVQ+DGGDIFY+GFD E+G+VSV+LAGSC+GCPSS+VTLKNGVENMLMHYIPEV+GI +V D+ELN +NE+E Q+LE RL AGIPS Sbjct: 43 TAVFAVPS----RSMFIQTENTPNPHSIKFLPGRAVLDERFTTGVDFTPKSPEVRQSLLAKELFTIHGVTRVFFGKDFISVTKTEDEDWDLLRGQIFATIMDFYATGKPIMSDKPVITDTTILDDDDEVVAMIKELLETRIRPAVQDDGGDIFYKGFDEETGIVSVQLAGSCAGCPSSSVTLKNGVENMLMHYIPEVQGILEVVDEELNEINEKEFQSLEARLRAAGIPS 268
BLAST of EWM30376.1 vs. NCBI_GenBank
Match: gi|325187609|emb|CCA22145.1| (ironsulfur cluster scaffold protein Nfulike protein putative [Albugo laibachii Nc14]) HSP 1 Score: 278.1 bits (710), Expect = 6.671e-90 Identity = 128/218 (58.72%), Postives = 171/218 (78.44%), Query Frame = 0 Query: 77 RSMFIQTESTPNPESLKYVPGELVLDEKYGTGMYFRQGDMEVNRSPLAKKLLKIEGVMGVFLGRTFITITKSPGIIWQNLNPEIFATVMDHYAEGGVIVSDHAIVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGCPSSAVTLKNGVENMLMHYIPEVKGIRQVEDDELNAVNEREAQTLEERLAKAGIPS 294 RSMF+QTE TPNP SLK++PG+ VLD+++ TG+ F G E+ +SPLAKKL +I+G+ VF G+ FI++TK+ + W L EIFAT++D Y G +SD IV+DTTIL DDEVVAM+KEL+E RIRP+VQ+DGGDIFY+ FD E G+V ++LAG+C+GCPSS+VTLK+GVENML +YIPEV+GI +V D EL +N++E +T EE+L AG+PS Sbjct: 69 RSMFVQTEPTPNPNSLKFLPGKPVLDDRFTTGVDFVPGAAEIRQSPLAKKLFQIDGISRVFFGKDFISVTKADDMHWDALRAEIFATIIDFYGTGEATMSDEPIVTDTTILPEDDEVVAMIKELLEQRIRPSVQDDGGDIFYKDFDVERGIVKLQLAGACAGCPSSSVTLKSGVENMLKYYIPEVQGIEEVNDAELEELNKKEFKTFEEKLRAAGVPS 286 The following BLAST results are available for this feature:
BLAST of EWM30376.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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