EWM30444.1, cds233 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|585113107|gb|EWM30444.1| (formate nitrite transporter [Nannochloropsis gaditana]) HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0 Query: 1 MKISTLCVLTMGMAAASASVSSFSSSSKPAKTLSTVPRLVSKVRGGNDSPASIVPQPLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGSFLMAGMQHLAFGGRDKTSATTTPVNKRE 329 MKISTLCVLTMGMAAASASVSSFSSSSKPAKTLSTVPRLVSKVRGGNDSPASIVPQPLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGSFLMAGMQHLAFGGRDKTSATTTPVNKRE Sbjct: 1 MKISTLCVLTMGMAAASASVSSFSSSSKPAKTLSTVPRLVSKVRGGNDSPASIVPQPLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGSFLMAGMQHLAFGGRDKTSATTTPVNKRE 329
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|585109294|gb|EWM27117.1| (nitrite transporter nar1 [Nannochloropsis gaditana]) HSP 1 Score: 300.442 bits (768), Expect = 3.201e-97 Identity = 157/257 (61.09%), Postives = 192/257 (74.71%), Query Frame = 0 Query: 56 QPLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGSFLMAGMQHLAF 312 QP +K P AY + + G KKA +PA I LLG+ AGLQVGIGAAMAVAT+ GVP +Q ++P LAKL++G GLPC LLM G LFTGNTAVV A E KI LQQL+K+W SY GN++G G LA LC YAGVFS +A +VA +K A+PFGVAVARGI+CNWLV TAVW++ AAADLVSKA A ++IITIFASLGFEHS+ANMFVGPFGA+ F+ FF++NL+PVTIGNI+ G ++A +L+F Sbjct: 64 QPPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALN--GGPSFLHFFLRNLIPVTIGNIIAGVVMVAFANYLSF 318
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|223997254|ref|XP_002288300.1| (formate/nitrite transporter family member [Thalassiosira pseudonana CCMP1335] >gi|220975408|gb|EED93736.1| formate/nitrite transporter family member [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 206.453 bits (524), Expect = 1.868e-61 Identity = 120/268 (44.78%), Postives = 164/268 (61.19%), Query Frame = 0 Query: 51 ASIVPQPLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGSFLMAGMQHLAFGGRDKT 318 AS+VP +KAP Y+ +A G KA KI LG+ AG +G G+ +A+ G P + E NP L K++FG GLP L+M + TGAELFTGNTA+V A EGK + + L+K+W SYAGN++G +LA L +G A + A+A AK +LPF A RGI+CNWLVC AV++++ A L K VA I+ F +LG +HS+ANMF+ P G M+ T F KNL+PVT+GNI+GG+ + G+ AFG K+ Sbjct: 5 ASVVPD--LKAPPAIYEGAVAAGAAKASASWEKIFKLGIAAGCHIGFGSYLAITVGGACPQIAEANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAAVMEGKTTTKDLIKNWVASYAGNVVGSLILAYLAFKSGTLGNAPAS-VAIATAKCSLPFETAFVRGILCNWLVCMAVYMASGCASLAGKMVAVWFPISAFVALGLDHSVANMFIIPLGMMRGAQIT-VGDFITKNLIPVTLGNIVGGALCVMGIYGSAFGKWFKS 268
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|1210516076|dbj|GAX24892.1| (hypothetical protein FisN_2Lh163 [Fistulifera solaris]) HSP 1 Score: 202.601 bits (514), Expect = 1.096e-59 Identity = 118/282 (41.84%), Postives = 168/282 (59.57%), Query Frame = 0 Query: 20 VSSFSSSSKPAKTLSTVPRLVSKVRGGNDSPASIVPQPLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGS 301 VS+ SS+ ++ + VP + S +S + +P +K P Y+ +A GVKKA SKI LGV++G +G G +A++ G P + E NP L K++ G GLP L+M + TG ELFTGNTA+V A+ EGKI + L+KSW SY GN +G LLA L A G T +A AK ++P+GVA RG++CNWLVC AV++++ + +V K A I+ F +LG +HS+ANM + P G M+ T F KNL+PVT+GNI+GG+ Sbjct: 12 VSATSSAFAISQPMGKVPTM---------SISSSLVEPELKLPVALYEGAVAAGVKKATASFSKIFTLGVVSGCHIGFGIFLAISVGGACPGLLESNPGLQKIITGAFGLPFGLIMTLVTGGELFTGNTALVTAAYMEGKIQRKDLVKSWVASYLGNFVGSLLLAYLAFQGMTLGAAPGAVT-LATAKCSVPWGVAFTRGLMCNWLVCMAVYMASGCSSMVGKMTAVWFPISAFVALGLDHSVANMCLIPLGMMRGAEIT-IAQMFTKNLIPVTLGNIVGGA 282
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|298713787|emb|CBJ27159.1| (nitrite transporter NAR1 [Ectocarpus siliculosus]) HSP 1 Score: 202.216 bits (513), Expect = 5.686e-59 Identity = 119/277 (42.96%), Postives = 163/277 (58.84%), Query Frame = 0 Query: 45 GGNDSPASIVPQ-PLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGSFLMAGMQHLAFG---GRDK 317 G +P S V P +K P Y+ + +G KKA +K+ L+G+++G +G GA +AV+ G P + NP L K++FG GLP L M + G ELFTGNTAVV A EGK S+ LLK+W SY GN +G LL L GV G+ +A AK +L F A ARGI+CNWLVC AVW+S +A+D K A + I+ F +LG +HS+ANMF+ P G M + + F + NL+PVT+GNI+GG+ + G+ AFG G+ K Sbjct: 70 GSTTAPVSAVASAPSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVN-PGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLG-MALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKKK 344
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|299117236|emb|CBN75198.1| (nitrite transporter NAR1 [Ectocarpus siliculosus]) HSP 1 Score: 200.675 bits (509), Expect = 1.566e-58 Identity = 110/246 (44.72%), Postives = 157/246 (63.82%), Query Frame = 0 Query: 58 LMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRT-GFVAFFVKNLVPVTIGNILGGSF 302 L+K P Y + LG +KA I+LLG+++G +G G +AV G +P ++ NP L KLLFG+ GLP L MV+ G ELFTGNTA+V A EGK ++ L+K+W+CS+AGNL+G LLA L AG+ + A GT A+A +K + PF +GI+CNW+VC AVWV+ A L K +A ++ ++ F + G EHS+ANMF+ P G S++ + FVKN++PVT+GNI+GG+ Sbjct: 70 LVKPPPGLYANAVDLGARKAAASPVDIVLLGILSGFHIGFGGLLAVTVGGSIPAIKSANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATVANLVKNWTCSWAGNLLGSVLLAKLVVAAGI-NAAPGTAAAIAVSKVSSPFLPTFLKGIVCNWMVCMAVWVAAGATSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDLFVKNILPVTLGNIVGGAL 314
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|1210511313|dbj|GAX29604.1| (hypothetical protein FisN_2Hh163 [Fistulifera solaris]) HSP 1 Score: 198.749 bits (504), Expect = 3.575e-58 Identity = 112/262 (42.75%), Postives = 161/262 (61.45%), Query Frame = 0 Query: 40 VSKVRGGNDSPASIVPQPLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGS 301 ++KV + S S+V +P +K P Y+ +A GVKKA SKI LGV++G +G G +A++ G P + + NP L K++ G GLP L+M + TG ELFTGNTA+V A+ EG+I + L+KSW SY GN +G LLA L A G T +A AK ++P+GVA RG++CNWLVC AV++++ + ++ K A I+ F +LG +HS+ANM + P G M+ T F KNL+PVT+GNI+GG+ Sbjct: 25 MAKVPAVSLSAPSLV-EPELKLPVALYEGAVAAGVKKATASFSKIFTLGVVSGCHIGFGIFLAISVGGACPGLLQSNPGLQKIITGAFGLPFGLIMTLVTGGELFTGNTALVTAAYMEGQIERKDLVKSWVASYLGNFVGSLLLAYLAFQGMTLGAAPGAVT-LATAKCSVPWGVAFTRGLMCNWLVCMAVYMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMCLIPLGMMRGAEIT-IAQMFTKNLIPVTLGNIVGGA 283
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|698946575|gb|AIU34483.1| (nitrite transporter [Isochrysis zhanjiangensis]) HSP 1 Score: 197.593 bits (501), Expect = 1.008e-57 Identity = 118/273 (43.22%), Postives = 159/273 (58.24%), Query Frame = 0 Query: 30 AKTLSTVPRLVSKVRGGNDS---PASIVPQPLMKA--PADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNI 297 A L T P L ++ G P QP M+ PA+ ++ ++ G KKA ASKI LG+M+G +G GA + ++ G P + NP L K++ G GLP L+M + TGAELFTGNTA+V A EGK+ +L+KSW+ SYAGN +G LA L G + AA A A K +L F A RGI+CNWLVC V++++ A DL K VA I+ F +L EHS+ANMF+ P G M + T + AF +KNL+PVT+GNI Sbjct: 14 ASGLLTTPGLSARALVGTSPTRLPHPRRAQPAMQLVLPAEGFEGAVSAGAKKAANSASKIFALGIMSGAHIGFGAFLMLSVGGCSPALAAANPGLQKIVLGAFGLPFGLMMTLVTGAELFTGNTALVTAALIEGKVKASELVKSWAASYAGNFVGSLALASLVFAGGTLATAASP-VATATLKTSLSFKQAFVRGILCNWLVCMGVYMASMAKDLPGKMVAIWFPISAFVALSLEHSVANMFIIPLGIMSGAAVT-WKAFLLKNLIPVTLGNI 284
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|1072229988|gb|OEU14722.1| (Form_Nir_trans-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 195.282 bits (495), Expect = 1.227e-56 Identity = 119/295 (40.34%), Postives = 172/295 (58.31%), Query Frame = 0 Query: 27 SKPAKTLSTVPRLVSKVRGGNDSPASIVPQPLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGSFLMAGMQHLAFG--GRDKTS 319 SK + T + + R+ N A+ V P +K PA Y+ +A GV KA + I LG+++G + GA +A+ G P + +NP L K++FG GLP L+M + TG ELFTGNTA+V A+ EGKI + L+K+W SYAGN +G LLA L +G + + A+A AK +LP+ VA RGI+CNWLVC AV++++ ++ K A I+ F +LG +HS+ANMF+ P G M + + AF KNL+PVT+GNI+GG+ + FG G+ KT Sbjct: 34 SKSSTTAANILRM-------NGGAAAGVDTPELKPPAALYQGAVAAGVAKASKSWIDIFKLGIVSGCHIAFGAYLAITVGGACPGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKIEGKALIKNWVASYAGNFVGSLLLAYLAFKSGTLASGPAS-AAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCTSMIGKMTAVYFPISAFVALGLDHSVANMFIIPLG-MLRGAEITTQAFLFKNLIPVTLGNIVGGALCVMAPFGDVFGTWGKKKTE 319
BLAST of EWM30444.1 vs. NCBI_GenBank
Match: gi|922852584|gb|KOO21263.1| (nitrite transporter nar1 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 193.356 bits (490), Expect = 6.362e-56 Identity = 110/254 (43.31%), Postives = 152/254 (59.84%), Query Frame = 0 Query: 64 DAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGSFLMAGMQHLAFGGRDK 317 D + +A G KKA PA KI LG+++G +G GA + ++ G P + NP L K++ G GLP L+M + +G ELFTGNTA+V A EGK ++ QL+KSWS S+AGN +G LLA+L Y S G AV+ AK +L F A RG++CNWLV AV++++ A D K V I+ F +LG EHSIANMF+ P G S + + F +KNL+PVT+GN GG+ +A +A+G K Sbjct: 55 DGFNGAVAAGEKKANMPADKIFHLGILSGAHIGFGAFLMLSIGGACPGLAATNPGLQKIVLGAFGLPFGLMMTLLSGGELFTGNTALVTMALLEGKATMGQLIKSWSASFAGNFVGSVLLAVLVFYGNTLS-GGGASIAVSAAKTSLTFTQAFVRGVLCNWLVTMAVYLASFAKDTAGKMVPIWFCISAFVALGLEHSIANMFIIPLGIFSGASVS-WPTFLLKNLLPVTLGNTFGGAVCVALAFCMAYGKLSK 306 The following BLAST results are available for this feature:
BLAST of EWM30444.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|