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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100100g22.8905.mrna |
| Orig protein id | gnl|cribi|Naga_100100g22.8905 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:548524..551343 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna218 ID=rna218|Name=rna218|organism=Nannochloropsis gaditana|type=mRNA|length=1466bp
CTACAGGCCTACGCCTGTGAGGGATATGGTGGAGATAACAATGGAGTTAC
CTGGCCAAGACTATCCTCTTTACCACGGGGGCGAGGAGGCGGGTAAGTAC
CGTCATATGAGGGGCGTGCCGGTAGTGCGCGTTCCCTCCTGTCAGACCCG
AGGCGACTTAGCCACCACGAAAGACATTGAGCACTGATAACATGTTTTTG
GGTCATGCGACAGGCGAGGAAGACGGCGTCGGAGCTGTGTGCTACCCACA
GCGGCCGGGGGAATTGGAGTGCCAGTACTATATGAAGACTGGAACCTGCA
AGTAAGTGAAAACTGGAGGGAGGGAGAAAGAAGAGGGTAAGGGAGACCTA
TCGCAGCAAAATATCAAGCCGTTACACTTGCACTCAAAGCATGAAATTCA
GCCAAAGTATGCCACGAAATGCAAGTTCCATCATCCTCCTGATGTGACTC
CAACCTGGGGAACCGTAGCGCCCGCGACAGACGTGACGATCGGGCTGAAC
AAGGAGTCATACCCTCGGCGGCCAGGGGAGCAGCAATGCACATTCTTTTT
GAAGACGGGCACGTGCAAGTACAAGATGTCGTGCAAATTCGACCATCCCC
CGGAGGCAATCCAACAGACCCTCCAGCTCCAGGCCACGCCCTACCCCATG
CGCCCCGGGGAGTTACAGTGCTCCTACTACCTCAAGACGGGGAAGTGCAA
ATTTGGAGCGACTTGTCGCTTCGACCACCCCGCGATGGCCCCCGAGCACG
CGACGGCCCTGGCGGCAGGACAGTACGCAGGTGCTGGGGGAGCGGGGGGG
ATGAACGGGCACGTTGGAGGGGCCGCGGGCATGCACGCCATGCTGGCGAT
GGGGAGGGTGGGGATGGGCTACTACGAGGGCACGGCGGGCGGAGGCATGC
TGGACATGATGGGACTACCAGGACAGCAGATGCTCGCCAATTTTGGCGCG
GGTGCCCCACTCGCCCAGCTCCCTCAGCGGCCCGGGGAGAAGGAGTGCAC
TTTCTTCCTCCGCACAGGTCGGTGTCAATATGGGCCCCGGTGCAAATTCC
ACCACCCGCTGGACAAGCTACAGGGGGCGCTCATGGGTCTGAACGGGGTT
CATGGAGGGCCCCACCTGTCCCACCCCCATGTGACCGGCCTGCACGCCCC
GGGCTTCGGGCATCCGGGACTGGAAGGTCTTTACAGCCCCTACGCCCTCC
CGGCCTCGGGTCCGGCGGGCCTCTCCCACGCCGGGCACTTGGCCATGCGC
GCTGGCGCCGGTGGTCTCGGGTCAAGCGGGGCGGGGGGGGAGGGGAAGGG
TCGCTGCCCCTGCGCCCTGGTCAGGAGCCGTGTTCCTTTTATTTGCGGAC
CGGGAAATGCTCGTACGGCCCCACCTGTCGGTTCGACCACCCCCGTGTGG
GCGGAGTGGCGCGGGAATTGAGCAGTGGGGCGGGGAGTCGGGAGGGAGGA
AGGGAGGGAGGGAAGG back to topprotein sequence of rna218 >rna218-protein ID=rna218-protein|Name=rna218|organism=Nannochloropsis gaditana|type=polypeptide|length=453bp
MVVYRNEEGMQGMRRGPVGDALSLLLDDYPSRILSIASLARLGLLVLTAT
GLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINV
NYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPS
IHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQWGGW
VRATTPLQAQEREEQRRQREQDQTQEPAGPSEGANPDSSLSPEAVGAWAR
QSPPDRPRRRPLRRLLAGILSLLLAPLSAGPGGRRYRRPESVHSTLVYMT
AAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNL
VRRDILGERMSWIRLLAPAVILHSMANFRGMKPIFKWASSSPWTEMQLQA
LSAPDYATALQQIWKAVWGLVWFAVLARVLGYIMFRHYLLSKQVRLRYAD
YRF back to topmRNA from alignment at CM002455.1:548524..551343+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna218 ID=rna218|Name=rna218|organism=Nannochloropsis gaditana|type=mRNA|length=2820bp|location=Sequence derived from alignment at CM002455.1:548524..551343+ (Nannochloropsis gaditana)
AATGTTGTCGTccctgggcgggagggagaactggaaggaagggaaatcCT
GCCCTCATCATCACTTGTACAACCACGACAGGATCACTGCACCATGGCCG
AGTGCAATATGATGGCGAGTCGTTGGTCGCACAACCATGGTGGTAAAGGC
ATAAAACGAGGGCGGCAGGGCGTGtcattcctctccctccttgttggAGG
CTGCTGCCTCTGGACGTCAGGGACAGGTACGTCCTCCGCGTGGAAGAATG
GATAGATGCCCCAAAAGAGAGTTCAAGCAGGTTGTAAATGAGGCCTTGCG
CGTAAAGGTGTCTTACTTGAGCACAAATGATGCCTGGTTGCACAGCGCAT
CACGTAGAAAGCCACGTCTCCGATGGAATTAAGGCCTTGGTTCTTGGCAG
AACATGAAGGTTTTCCTTAATATCCTGGAAACAACATGCCGTCAACTACC
ACAAAGTATTGCTGTCCATTAGTAAAAGCGCTTTGATCTGATTTTGACCG
TTTTATGGTGTATGTTCCTGCAGGCGCCGCCTCTGTGACGCATTCCACCC
GGGGGTATTTCAGCGGCACGGGAAACACCGCATCCCTTCATGCAAACAAC
GATCGCAAAGGctcgggaagggggggggtaacACGCCGAGGTGCCCAGTT
GGCGGCGTCGACTTCCCCGTCCCCATCCAGCCCGACGTCTGTCTCGCCCA
GGTCCGAGGGAGTAGGGCCCAGCCCCTACAGTACGGGGAGCTCTGGGAGT
AATGGTgacgcggggaagaggggtgcgggaaggaagcgtgGAATTGGCtc
cgagggaggcggcggagggggcacgGGAAAGCCGCTCGCCCAGCCCAAGT
ACAGGACCCTGCAGCGGCTGCTGCAAgacttggaggagagcgactatgga
ggcattggggcgtggggggagtTCAACACGAACCCCAGGCGCCGGGTGTC
GAGGTCATTTAactcggagggcgggggcggcggtggaggcacGAGCATAG
GTGGGTTCGGGGTGCCTCCGCAGCAGCAGTACTACcaggggccgggcggc
gTTCAGCAACAACAAAAGCAGCAACAGGTCGGGGCCGCCCAGGGCGAACA
ATtgtcggggggagggccgatggagggagatTCTTACGGCCCCCCGCCGT
CACCACACCAAGGCTTCTACTGGGGCCCTTCCAGTCTCCATCAACAGcaa
ccaccgccgccgcagcagccagaggggggggggggagagggggggggggg
gcgccttTGTACAGGGACGGGCGGATGGTGGTCTACCGCAATGAGGAGGG
CATGCAGGGCATGAGAAGGGGCCCGGTGGGGGACGCGCTCAGCCTCTTGC
TCGACGACTATCCCTcccgcatcctctccatcgcctccctcgcccgcctg
gGGCTCCTGGTCCTGACGGCCACAGGCCTGGCGTATCTCGCCGTGGTCCC
CCGCAACGCACCCACGGAGCAGTACAACTACCTGTTCAAAacgaacctcc
tcctcgtctccgcctccctggcctggccctccctcctcctctgcctcatG
TACAACGCCCGTGAGATCAACGTCAACTACCTGATCCGCACTTTCttcac
cgccgccacggctGGATACCTGGGGTCATTTTTGACGGAGATCGTGGCCG
CCACGGGCCTCAAGCTCCTCGCCTTCTACCGGCTGGAGCCCCACATGCAG
GCGGCCTGCCCCGAGATCCCCTCCATTCACCTGCCCTGGGTGTGGAAGAC
CGATTGCGTGAGCTACAGGCCCAGGCTCCTGACTCTGTTGATCGCCGACC
TCGCCATCAACTGTCTTGCCAGCCCTATCATCGAGGAGGCCGCCAAGCTG
CTCTGCTACCAATGGGGAGGCTGGGTCCGAGCCACCACCCCGCTCCAGGC
GCAGGAGCGTGAAGAACAGCGTCGGCAAAGGGAACAAGACCAGACACAAG
AGCCGGCAGGCCCGAGCGAAGGGGCAAACCCTGActcgtctctctctcct
gAGGCGGTCGGCGCCTGGGCCCGTCAATCCCCCCCAGACCGTCCTCGCAG
ACGGCCCCTCCGACGCCTTCTCGCCGgcatcctttccttgctCTTGGCGC
CCTTGTCCGCGGGTCCCGGCGGGCGTCGGTACCGTCGACCTGAGAGCGTG
CACTCTACCTTAGTGTACATGACAGCGGCCGCCCTGGGGCTGAAGGCAGC
GGACAACGCGCGTCGCATCCTCGTCTACACCAGGCCTCAAGATACCTCAA
AGCCGTTTTTCGCACTGGCCCGGGGGTTCTTTCCCGTCCACGAGCTTTGC
GGGGCATTCACTGCGCTAAACCTCGTGCGGCGGGACATCTTGGGGGAACG
CATGTCGTGGATTCGCCTGCTTGCACCtgccgtcatcctccactCCATGG
CCAATTTCAGGGGAATGAAGCCGATATTTAAATGggcttcctcgtcgccg
tGGACTGAGATGCAGCTCCAGGCGTTGAGCGCTCCGGACTATGCCACAGC
TTTGCAACAGATATGGAAAGCCGTTTGGGGACTGGTGTGGTTCGCGGTCT
TGGCGCGGGTGCTGGGGTACATCATGTTCCGACATTATCTGTTGAGCAAG
CAAGTCCGACTCCGGTATGCTGACTACCGGTTTTAGGGGAGAAAAGACTT
GTATCGACACATGTATAGGTTGGTTGCCTTGGAATAGCGACAAACAGTGT
ACATGGAACAAAAAAAATGACTTGAGAAATAGAGCGGCGTGAGCCGTAAA
ACGAGCCGTATCCCAACACTGAATTAACATGAGTTAAATCTCCCAGTGAA
TTCTTCCGATTTATTTTACC back to topCoding sequence (CDS) from alignment at CM002455.1:548524..551343+ >rna218 ID=rna218|Name=rna218|organism=Nannochloropsis gaditana|type=CDS|length=1362bp|location=Sequence derived from alignment at CM002455.1:548524..551343+ (Nannochloropsis gaditana)
ATGGTGGTCTACCGCAATGAGGAGGGCATGCAGGGCATGAGAAGGGGCCC
GGTGGGGGACGCGCTCAGCCTCTTGCTCGACGACTATCCCTcccgcatcc
tctccatcgcctccctcgcccgcctggGGCTCCTGGTCCTGACGGCCACA
GGCCTGGCGTATCTCGCCGTGGTCCCCCGCAACGCACCCACGGAGCAGTA
CAACTACCTGTTCAAAacgaacctcctcctcgtctccgcctccctggcct
ggccctccctcctcctctgcctcatGTACAACGCCCGTGAGATCAACGTC
AACTACCTGATCCGCACTTTCttcaccgccgccacggctGGATACCTGGG
GTCATTTTTGACGGAGATCGTGGCCGCCACGGGCCTCAAGCTCCTCGCCT
TCTACCGGCTGGAGCCCCACATGCAGGCGGCCTGCCCCGAGATCCCCTCC
ATTCACCTGCCCTGGGTGTGGAAGACCGATTGCGTGAGCTACAGGCCCAG
GCTCCTGACTCTGTTGATCGCCGACCTCGCCATCAACTGTCTTGCCAGCC
CTATCATCGAGGAGGCCGCCAAGCTGCTCTGCTACCAATGGGGAGGCTGG
GTCCGAGCCACCACCCCGCTCCAGGCGCAGGAGCGTGAAGAACAGCGTCG
GCAAAGGGAACAAGACCAGACACAAGAGCCGGCAGGCCCGAGCGAAGGGG
CAAACCCTGActcgtctctctctcctgAGGCGGTCGGCGCCTGGGCCCGT
CAATCCCCCCCAGACCGTCCTCGCAGACGGCCCCTCCGACGCCTTCTCGC
CGgcatcctttccttgctCTTGGCGCCCTTGTCCGCGGGTCCCGGCGGGC
GTCGGTACCGTCGACCTGAGAGCGTGCACTCTACCTTAGTGTACATGACA
GCGGCCGCCCTGGGGCTGAAGGCAGCGGACAACGCGCGTCGCATCCTCGT
CTACACCAGGCCTCAAGATACCTCAAAGCCGTTTTTCGCACTGGCCCGGG
GGTTCTTTCCCGTCCACGAGCTTTGCGGGGCATTCACTGCGCTAAACCTC
GTGCGGCGGGACATCTTGGGGGAACGCATGTCGTGGATTCGCCTGCTTGC
ACCtgccgtcatcctccactCCATGGCCAATTTCAGGGGAATGAAGCCGA
TATTTAAATGggcttcctcgtcgccgtGGACTGAGATGCAGCTCCAGGCG
TTGAGCGCTCCGGACTATGCCACAGCTTTGCAACAGATATGGAAAGCCGT
TTGGGGACTGGTGTGGTTCGCGGTCTTGGCGCGGGTGCTGGGGTACATCA
TGTTCCGACATTATCTGTTGAGCAAGCAAGTCCGACTCCGGTATGCTGAC
TACCGGTTTTAG back to top
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