EWM30437.1, cds218 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30437.1 vs. NCBI_GenBank
Match: gi|585113100|gb|EWM30437.1| (hypothetical protein Naga_100100g22 [Nannochloropsis gaditana]) HSP 1 Score: 916.761 bits (2368), Expect = 0.000e+0 Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 0
Query: 1 MVVYRNEEGMQGMRRGPVGDALSLLLDDYPSRILSIASLARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQWGGWVRATTPLQAQEREEQRRQREQDQTQEPAGPSEGANPDSSLSPEAVGAWARQSPPDRPRRRPLRRLLAGILSLLLAPLSAGPGGRRYRRPESVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFRGMKPIFKWASSSPWTEMQLQALSAPDYATALQQIWKAVWGLVWFAVLARVLGYIMFRHYLLSKQVRLRYADYRF 453
MVVYRNEEGMQGMRRGPVGDALSLLLDDYPSRILSIASLARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQWGGWVRATTPLQAQEREEQRRQREQDQTQEPAGPSEGANPDSSLSPEAVGAWARQSPPDRPRRRPLRRLLAGILSLLLAPLSAGPGGRRYRRPESVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFRGMKPIFKWASSSPWTEMQLQALSAPDYATALQQIWKAVWGLVWFAVLARVLGYIMFRHYLLSKQVRLRYADYRF
Sbjct: 1 MVVYRNEEGMQGMRRGPVGDALSLLLDDYPSRILSIASLARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQWGGWVRATTPLQAQEREEQRRQREQDQTQEPAGPSEGANPDSSLSPEAVGAWARQSPPDRPRRRPLRRLLAGILSLLLAPLSAGPGGRRYRRPESVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFRGMKPIFKWASSSPWTEMQLQALSAPDYATALQQIWKAVWGLVWFAVLARVLGYIMFRHYLLSKQVRLRYADYRF 453
BLAST of EWM30437.1 vs. NCBI_GenBank
Match: gi|1210519115|dbj|GAX22113.1| (hypothetical protein FisN_6Hh362 [Fistulifera solaris]) HSP 1 Score: 191.045 bits (484), Expect = 5.713e-50 Identity = 118/345 (34.20%), Postives = 177/345 (51.30%), Query Frame = 0
Query: 38 SLARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQWGGWVRATTPLQAQEREEQRRQREQDQTQEPAGPSEGANPDSSLSPEAVGAWARQSPPDRPRRRPLRRLLAGILSLLLAPLSAGPGGRRYRRPESVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFRGMK 382
S+ ++ LL+ + + AV PRN P ++Y + N +VS L +P++++ L+Y+ N N +I T FT+ + GY +F++E+V AT ++L F LE + P IP LPWV + + Y+P+ +TL AD +C+ASP++EE KL W AT P R + + T+ + L PE V +RR G + ++ A + + M AA+LGLK D+ RRIL+YT+P SK FF+ RG FP+HELCG TAL L +RD+LG M ++L P+V++H MANFRGMK
Sbjct: 442 SIQQITLLIAAGSLACFAAVSPRNLPLDEYRFRILENARVVSLVLIFPAVVMALVYDGAMNNRNDVINTLFTSCSVGYTMAFISEVVLATVIRLAVFSLLEKRIFDLSPRIPLFILPWVLREN--GYKPKRITLFAADFLTSCIASPVVEEFVKLKILLWT----ATLPRNFNWRRKTVTDKHSQVTK------------TELVPEQV------------QRR------DGEVDIVNA-----------------NQHVTQMLAASLGLKMCDSIRRILLYTKPHHESKSFFSFCRGVFPIHELCGTITALGLAKRDLLGVAMPLWKILLPSVVVHGMANFRGMK 733
BLAST of EWM30437.1 vs. NCBI_GenBank
Match: gi|1210526624|dbj|GAX14582.1| (hypothetical protein FisN_6Lh362 [Fistulifera solaris]) HSP 1 Score: 190.274 bits (482), Expect = 1.012e-49 Identity = 118/345 (34.20%), Postives = 178/345 (51.59%), Query Frame = 0
Query: 38 SLARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQWGGWVRATTPLQAQEREEQRRQREQDQTQEPAGPSEGANPDSSLSPEAVGAWARQSPPDRPRRRPLRRLLAGILSLLLAPLSAGPGGRRYRRPESVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFRGMK 382
SL ++ LL + + AV PRN P +Y + N+ +VS +L +P+L++ L+Y+ N+N +I T FT+ + GY +F++E++ AT ++L F LE + P IP LPWV + + YRP+ +TL AD +C+ASP++EE KL W AT P R++ + T+ + L PE V +RR G + + A + + M AA+LGLK D+ RRIL+YT+P SK FF+ RG FP+HELCG TAL + +RD+LG + ++L P+V++H MANFRGMK
Sbjct: 451 SLQQITLLFAGGSFACFAAVSPRNLPLNEYRFRILENVRIVSLALIFPALVMALVYDGAMNNLNDVINTLFTSCSVGYTMAFISEVMLATVIRLAVFSFLEKRIFDLSPRIPLFILPWVLREN--GYRPKRITLFAADFLTSCIASPLVEEFVKLKILLWT----ATLPQNFNWRKKSVTDKNSHVTK------------TELVPEQV------------QRR------DGEVDTVNA-----------------NQHVTQMLAASLGLKMCDSIRRILLYTKPHHESKSFFSFCRGVFPIHELCGTITALGIAKRDLLGVAIPLWKILLPSVVVHGMANFRGMK 742
BLAST of EWM30437.1 vs. NCBI_GenBank
Match: gi|1072223812|gb|OEU08565.1| (hypothetical protein FRACYDRAFT_249457 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 187.963 bits (476), Expect = 3.640e-48 Identity = 147/506 (29.05%), Postives = 218/506 (43.08%), Query Frame = 0
Query: 36 IASLARLGLLVLTATGLAYLAVVPRNAPTEQYN--------------------------------YLFKTNLLLVS----ASLAWPSLLLCLMYNAREIN--VNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPH----------------MQAACPEI--------------------PSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQWGGWVRATTPLQAQ----EREEQRRQREQDQTQEPAGPSEGANPDSSLSPEAVGAWARQSPPDRPRRRPLRRLLAGILSLLLAPLSAGPGGRRYRRPESVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFRGMKPIFKWASSSPWTEMQL------------QALSAPDYATALQQIWKAVWGLVWFAVLARVLGYIMFRHYLLSKQVRLRYADY 451
I + ++ + +L G Y AV PRN P +YN Y F NL +S AS + N I+ ++ +I +F+T+ GY+ F+ EI+ T L+L+ F EP+ + EI P LPWV + YRP+ +TLL+AD+ +C+A PIIEE KL QW T PL ++ ++++ EP ++ E V + + + RL GRR +++ + M A +LG+K AD RR+ +YT+ QD K +A +RG FPV ELCG TAL L RRD+LG+RM LL PAVI+HSMAN RGMKPIFKW S++PW+EMQL ++ ++ L+ + KA + W +L RV GY ++++++Q R Y
Sbjct: 679 INTSRKVCMCLLLMVGTCYSAVSPRNLPYVEYNIQFYNNIKSCALVILPPLLGYTWIIIDWNQLQYYFHDNLSSISNKKSASSGSNKVSTTTTKNDSGISTAIHIMIHSFYTSFIYGYIWVFVLEIIWTTILRLIVFLMFEPNNMFGIDINASSFSWSGLVGVGGEIMNKIMSNNKNNGSSSTSSMPPLFVLPWVLRE--YKYRPKRITLLVADIVTSCVACPIIEEFIKLRLLQW------TMPLSKNFIWVQKLSNHDKKQKRMVAEPI-----------VNDETVETTTATTAATSNKSK--IRL-----------------GRRDGEVTNINPYISGMIAVSLGIKWADAIRRVCMYTKVQDEHKCIYAFSRGMFPVQELCGIMTALRLARRDVLGQRMPLWNLLLPAVIIHSMANLRGMKPIFKWNSATPWSEMQLSPNLFSSAETISSSMDGSGTSSTLKWLGKAFPKITWVIILFRVTGYCGKNYFMINRQAMKRTTTY 1146
BLAST of EWM30437.1 vs. NCBI_GenBank
Match: gi|224004286|ref|XP_002295794.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|209585826|gb|ACI64511.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 167.933 bits (424), Expect = 2.806e-41 Identity = 80/161 (49.69%), Postives = 106/161 (65.84%), Query Frame = 0
Query: 291 SVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFRGMKPIFKWASSSPWTEMQLQALSAPDYATALQQIWKAVWGLVWFAVLARVLGYIMFRHYLLSKQVRLRYADY 451
+++ + M AA+LGLK D+ RRIL+YT+ D+ K F+A+ RG FP+HELCG TAL L RRDILG M +++ PAV +H MANFRGMKPIFKW SS+PW+EMQL T Q + K+ LVWF +L RVLG+ + +YL+ +Q R Y
Sbjct: 776 NINCYVTQMLAASLGLKLFDSTRRILMYTKKSDSYKHFYAVCRGAFPIHELCGTMTALFLARRDILGVNMPMWKIIGPAVFIHGMANFRGMKPIFKWNSSTPWSEMQLYPWKVGSNFTLKQILSKSYAKLVWFTILCRVLGFCVKNYYLIQRQAMKRMTTY 936 HSP 2 Score: 117.857 bits (294), Expect = 1.779e-24 Identity = 65/164 (39.63%), Postives = 91/164 (55.49%), Query Frame = 0
Query: 34 LSIASLARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQW 197
+S SL ++ + L+Y AV PR P +YN LF L V S P +L +Y+ + N+N +I TF + T GY +F+ EI+ T L+L F EP + + P++PSI LPWV + YRP+ +TL AD A +C+ASPIIEE KL QW
Sbjct: 584 ISFDSLQKIAFSTIGVALLSYCAVSPRTLPFPEYNRLFLQTLSTVGLSAIIPLAMLMCVYDGKYNNINTIIGTFHVSFTLGYTLAFVLEIIVTTALRLGVFMIWEPAIFSLTPKVPSIILPWVLREK--QYRPKRITLFAADFATSCVASPIIEEYLKLKIVQW 745
BLAST of EWM30437.1 vs. NCBI_GenBank
Match: gi|397615059|gb|EJK63190.1| (hypothetical protein THAOC_16170 [Thalassiosira oceanica]) HSP 1 Score: 156.762 bits (395), Expect = 1.297e-37 Identity = 84/184 (45.65%), Postives = 112/184 (60.87%), Query Frame = 0
Query: 278 SAGPGGRRYRRP---------ESVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFRGMKPIFKWASSSPWTEMQLQALS-APDYATALQQIWKAVWGLVWFAVLARVLGYIMFRHYLLSKQVRLRYADY 451
S+ GR+ R P +++ +V M AA+LGLK D RRIL+YT+ D K +A+ RG FP+HELCGA TAL L RRD+LG + ++L PAV +H MANFRGMKPIFKW S+SPW+EMQ+ LS D Q + K+ LVW +L RV G+ + +YL+ +Q R Y
Sbjct: 702 SSKGKGRKKRVPVRGIDSPQVTNINCYMVQMLAASLGLKLFDVTRRILMYTKDNDRFKKTYAVYRGVFPIHELCGAMTALLLARRDVLGVSLPTWKILGPAVFIHGMANFRGMKPIFKWNSASPWSEMQINQLSRESDVPLWRQLMPKSYAKLVWLTILCRVFGFCIKNYYLIGRQAVQRTTVY 885 HSP 2 Score: 82.0333 bits (201), Expect = 5.881e-13 Identity = 58/183 (31.69%), Postives = 89/183 (48.63%), Query Frame = 0
Query: 16 GPVGDALSLLLDDYPSRILSIASL-ARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQW 197
G G L D+ PS+ + +S+ +++G+ AVVP +P L + S+ + P C + V+ I TF + T GY +F+ E++ T ++L F EP + PE+PSI LPWV + Y+P+ +TL AD A +C+ASP+IEE KL QW
Sbjct: 531 GDAGMQREALADNVPSKNAATSSIHSQMGVRS---------AVVPPTSP------LISASPPRTSSLMKSPEGPYCEL-------VDESIGTFHVSFTLGYALAFIAEVITTTLVRLGVFKIWEPAIFNLTPEVPSIILPWVLREK--QYKPKRITLFAADFAASCIASPVIEEIIKLKVVQW 689
BLAST of EWM30437.1 vs. NCBI_GenBank
Match: gi|219111335|ref|XP_002177419.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411954|gb|EEC51882.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 120.553 bits (301), Expect = 1.760e-25 Identity = 69/189 (36.51%), Postives = 106/189 (56.08%), Query Frame = 0
Query: 9 GMQGMRRGPVGDALSLLLDDYPSRILSIASLARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWVWKTDCVSYRPRLLTLLIADLAINCLASPIIEEAAKLLCYQW 197
G M +G S L + +RI S ++ ++ +++ L Y AV PR P +YN F N+ VS S P + + +++ARE +VN ++ TFF + T GY +F E+V AT ++LL F+ EP++ + P +P LPWV + +C YRP+ +TLL AD +C+A+P IEE KL QW
Sbjct: 625 GTHPMETSQLGFGTSQSLAEASARI-SFDAIQQISFMMMMTALLCYSAVSPRTLPLTEYNLRFYENIQSVSLSAVVPIISMVSVFDARENDVNRIVNTFFFSFTLGYTMAFAGEVVMATVVRLLTFFWFEPNIFSLTPMVPVPILPWVLR-EC-KYRPKRITLLAADFGTSCVAAPFIEEYMKLKIVQW 810
BLAST of EWM30437.1 vs. NCBI_GenBank
Match: gi|298711579|emb|CBJ32640.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 98.2117 bits (243), Expect = 3.349e-18 Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 0
Query: 289 PESVHSTLVYMTAAALGLKAADNARRILVYTRPQDTSKPFFALARGFFPVHELCGAFTALNLVRRDILGERMSWIRLLAPAVILHSMANFR 379
P VH+ L+Y+ +A+GLKAA +R+LVYTR K FFA+ARGFFP+ ELCG+ A+NL RRDILG+RM+ ++L V L++ A FR
Sbjct: 600 PTHVHTYLLYVLGSAMGLKAACTMQRVLVYTREYHEHKTFFAIARGFFPLFELCGSIMAMNLARRDILGDRMNRLQLFFVPVSLNAYAVFR 690 HSP 2 Score: 88.1965 bits (217), Expect = 5.388e-15 Identity = 52/127 (40.94%), Postives = 73/127 (57.48%), Query Frame = 0
Query: 30 PSRILSIASLARLGLLVLTATGLAYLAVVPRNAPTEQYNYLFKTNLLLVSASLAWPSLLLCLMYNAREINVNYLIRTFFTAATAGYLGSFLTEIVAATGLKLLAFYRLEPHMQAACPEIPSIHLPWV 156
P + L++ S +R+ AT A+LAV P NAP + Y LF+ NL L++ASL P++ L+Y+ + N+N +R A T GYL SF EIVAAT +L +EP P +P+I LPWV
Sbjct: 440 PPKTLTLRSWSRIMGAAGIATAGAFLAVSPNNAPRDLYLALFRRNLGLIAASLVGPAVYSFLLYDGSKANINTYVRVVTFAFTWGYLISFALEIVAATSFQLCVLAVMEPKAFDLTPHVPAIFLPWV 566 The following BLAST results are available for this feature:
BLAST of EWM30437.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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