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Properties
| Property Name | Value |
|---|
| Product | core-2 i-branching enzyme |
| Orig transcript id | gnl|cribi|Naga_100129g19.1877.mrna |
| Orig protein id | gnl|cribi|Naga_100129g19.1877 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:205819..208284 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna74 ID=rna74|Name=rna74|organism=Nannochloropsis gaditana|type=mRNA|length=1523bp
AGGCAGTAAGAGGACTGCAATGCAGGAATGCCACGTACGCATCCTCAATC
GACTACCTGAGGCTTACTTTCCATCTCCTGTCCTATTGCACCGGTTGCCC
ACAATTTCACAGGCAACGTAAAGGTACAAAATGTATCGCTGGTCTTGTGC
GTTAGTGTGTGCCCTGCTGGCAGTCGCGGAGGTCGATGGTCATGCGCGCT
GGAAATGCCCCGCCCCCCGCGATGAGAATGACGCGGATGGCAACCACATC
CCGTTCGATAATACCGGCAACAAAGTCGGGCCCTGTGGCCCCTACTCAGG
CATGTACGGGATGAACGGTGTACGCGTCCTGAAACCAGGCCCCTTGACGC
TCACCTGGGAAGAAAGCATCGCGCACGTGGGTTCTCCCTTCCGAATTGCC
ATTCTGGACGAACACGAAAAAGTGAAGGTCGTCCTTGCGGACCACATCCC
TCACGACGACGCGGCCAAAACCACGTTCTTCGAGCAGTTCTATACGCCCT
ACCACCTCACAGTCGACATCCCGGACGTGCAATGCGAAAAATGCACCTTG
CAATTGATTTATTTCATGACGGACAAGACTGTCAAATGCGGCTCTTTGTT
GTGTACCTACTACCCTGAAGACTCCGCCTGTTCGGGCCAAATCGACGCGA
GCGAGCCCACTTGTTTCGGGGCTCCCAACGATGTTCCCTGTCTCAAGGAG
GACACGTGTTTTTCCAACTACCATACCTGCACCGACGTGACGATTCAGGG
TACCCGGAGTTTCGAAGAATTCGACATGGATCTACAGCCAATGGACTGGC
CATACAAGAACCTAACCATGGGGGTGTACGGAGCCGAGGAGGCTGTGTGG
GAGGGTGGGTGGTTGAAGGACGTGCCTGCACGTTTTAACACCGTGGCAGA
GTTCTTGGAGTGCTGAGGAGGTAGCCTATCTGCGGAGGTCAACGGCCGCT
GCGAGAGGGGATCGGGTTTAGAGTGAATGCGAGGGGAGTCGGCCGTCTCC
TGTGGAGGGCGCGCGGCTGCGAGAGAGGGGGGGGAAAGGGGGAATGGGGG
AATGTGTGTATAAGGAGCATAGGAAGCAAAACGACGCCATGAACGCAGAA
ATTTCTTGTCGGGAGGCTGGAAGACGAATGAATCCTGTGGACCGGGATGA
AGGTAAAGGGTCCTGCATTGTAGCCGTGATCTCGATGCGGTCTGCCACCT
CGTCGATATATCTCGATTTAGCAAGCAGCCTCGCAGCATACGCACCGGCC
CATAGCAGCGAAGCACGGAGACGAATCGCTTCCACGATGGGATCTGAAGA
GGAATTTGGGGGTATGTGTGCGGGGGTGGAGGGAATTACAGGCCTCGAGC
AGCGTGCAGTGAAGCGCGGGAGGAAATTGGGGGAAAAGAAGAAAGATGTA
CATGCGTGTGCGCTGTGCCAAGATGCTTGAGCGCGTCGGGGGGTGTAAAG
CCTTAGTATTCCGTCGCTTGCGTCGCAGGAAGCCTTGCATTACTTGTTTC
TTTCGGAACCCTGGCCTCCATTC back to topprotein sequence of rna74 >rna74-protein ID=rna74-protein|Name=rna74|organism=Nannochloropsis gaditana|type=polypeptide|length=377bp
MAQWNTGTDMITSYLGRATIFWRTASLLLLFLSGDGQLFVHRSANYKGTC
RADTLSNVSYKEVGLVDRPSPGKVAYGVMVYQRQNKTVSDVFDQFTRLFD
AIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGIT
VVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPAT
NFIYCWDLRGHDFFGQWEHHEGRVSKVFVDMFDGRSREVRGLPRSPPKVR
QGHMHMHQYLYNVSFPLSLSHYAHLHASLHDRNTLSTRASSKPSSPAPLW
SPPCMPPSPVGSFCTSPRPKRRMRYSSPHSSTSLPTVPTLPAPPAIAPFI
SPTGSARGAVGTPSTSPHCTCPCSWKK back to topmRNA from alignment at CM002455.1:205819..208284- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna74 ID=rna74|Name=rna74|organism=Nannochloropsis gaditana|type=mRNA|length=2466bp|location=Sequence derived from alignment at CM002455.1:205819..208284- (Nannochloropsis gaditana)
ATGGCACAATGGAACACAGGGACGGACATGATTACGTCATATTTGGGAAG
AGCTACGATCTTCTGGCGGACGGCGTCACTCCTCCTCCTGTTTCTCTCAG
GGGACGGGCAACTCTTTGTTCATAGAAGCGCCAACTACAAGGGAACATGC
CGTGCAGGTAAAGTATACATCATCTGAACTGTTCATTTTTCTTTCGAGCA
TGGCTTAAAATTTGTGCCTCGCCGGCGTTTAATTGCGTGGAGATGGACAA
CGGAATGGTATTCGCCGCTGGTTGTCATATTCAGATTCATCATGGCGATG
TGCGGCGCTTTTCATCCCTTCATTCTGGATTTCGCAGTCCAAATTGAAAC
GTCAGCGCCATCTGATTTCTTCTCCCTGTTACTTAACGAATGAAGCGAGG
CATCCTTCCCGCGCTTTGCCGACCATGCTATTGTGAAAAAACGGCCCCGC
ATGACGGTCTCCTCTCCCTTCCCCACGCGGCATGTCTCTGCCCGCCCTCA
GATACCCTTTCGAATGTCTCCTACAAGGAAGTGGGCCTCGTCGATCGCCC
TAGCCCGGGCAAAGTGGCCTACGGTGTAATGGTCTATCAACGACAGAACA
AAACCGTGTCGGACGTCTTCGACCAATTTACCCGCCTCTTCGATGCCATA
TATTCCCCCAATTTCACCTGTGTGGTGCATGTGGATATCAAGAGCGAGCC
TGCCTTGATCGAAAAAATTACCGACTATGTGAAGAAGCACGCGCCTCAGG
CAAGCACGATCCCCAGTGTGAGCGTGAGTTGGGGGGGAATCACCGTAGTG
GAACGCACGCTGGCGCTGATGCAGGCCGCCTTGGAAAGCGACCCGGAGTG
GGAATATTTCGTCAACATCGGCCAGGTAAGCGTGAGGGTTTCATGTGGTG
TTCTGGACAGGCACGAGGCGTGCATTCTCCTTTGGTACCGTTGCGTGGTG
TGGCTGTTATAACCTACCCCCAGGGTCCGGCCCAGCTTTATCCTCCCTTC
CCCTTCTGCAGCTGACGCGGGCACATTCCTCTCGTTTCTTCCTCTGCCAA
GACGTACGGACGCCCCCCATCGCTCACGTGTCAACCGATCCCTCCCTATC
CCCAGGAGGACTACCCCCTACAGAGCCCTGCGGCCATCCAGGAGTATCTG
GCCCATGCAGTGCCCCCCGCCACCAATTTCATATATTGCTGGGACCTGCG
CGGGCACGATTTCTTCGGGCAGTGGGAGCACCACGAAGGACGCGTGTCGA
AGGTGTTTGTCGACATGTTTGACGGTAGAAGCCGCGAGGTCCGGGGCCTT
CCCCGGTCCCCCCCCAAGGTGAGACAAGGGCACATGCACATGCACCAATA
CTTGTACAACGTCTCATTCCCTCTTTCTCTTTCCCATTATGCCCACCTGC
ATGCCTCCCTCCACGACAGGAATACTCTTTCTACAAGAGCCTCCAGCAAA
CCGTCCTCTCCCGCGCCTTTGTGGAGTCCGCCGTGCATGCCCCCGAGTCC
CGTCGGCTCCTTCTGTACCTCGCCACGTCCGAAGCGCCGGATGAGATATT
CTTCCCCACACTCCTCCACCTCCCTTCCAACCGTGCCCACGCTGCCCGCG
CCACCTGCAATAGCACCCTTCATTTCTCCCACTGGATCCGCCCGGGGGGC
AGTTGGCACCCCGAGTACCTCACCCCATTGCACTTGCCCTTGCTCTTGGA
AAAAATAAGGGCGTCTTCACCCTCCTTCCCTGCATTTTGGGCGCGAAAAT
TCGACGTTGGGAAGGGCTCCAGCGCCTTGATGGCCGCCCTCGACTATCTC
CGGGAGTGTCGGCCTGCTAGGGACCAGGCCGCCAAAAGCTTGGAGTGGGC
GCCGGCGATCGTGTTCGCCAAGGAAATGGGACAGCACATTGTGGACCGAG
AGCTGAGGGACGGGGAAGACCCGCAGTGCGCCTACCGCGTAGTGCGCGTG
GGGGGAAAAGTGGTGACAGGGGAAGACATGCTGCTCCATTTGGACAAAGC
CCGGCGCAGTCAAGACGCCGAAGCCATCATGCGTTTCTTAACGCACGTCG
AGAATGAGATGAAGGCCTACAAGGACTATCACACCGACCCCCGCTGGCAG
GTGGAGCGTCGACGGCTGCAGCATCACCGGCAGGTAGCGGAACGAGACTT
ACAGCCGGAACCCCGGATTTTGAGGACTGCCGGGGTTCAGGCGAGCGAAG
TGATTTTGTGAAAGCGGAAGAGAGGGATGGGGTGATACTCCGTTGTGCAG
TGGAAGGGCTCGGATGGGGTGGGGGGGAAAAGTAAGATTTTGGGGGCAAT
ACGCCGTGCACATGCATAAAATATCTGTAAAATCTACCTACCACGAGAGG
AGAGTTGCAGTTTCTTCGCGATCAAGCCTGAATGGAGGCCAGGGTTCCGA
AAGAAACAAGTAATGCAAGGCTTCCTGCGACGCAAGCGACGGAATACTAA
GGCTTTACACCCCCCG back to topCoding sequence (CDS) from alignment at CM002455.1:205819..208284- >rna74 ID=rna74|Name=rna74|organism=Nannochloropsis gaditana|type=CDS|length=3402bp|location=Sequence derived from alignment at CM002455.1:205819..208284- (Nannochloropsis gaditana)
GAGGACTACCCCCTACAGAGCCCTGCGGCCATCCAGGAGTATCTGGCCCA
TGCAGTGCCCCCCGCCACCAATTTCATATATTGCTGGGACCTGCGCGGGC
ACGATTTCTTCGGGCAGTGGGAGCACCACGAAGGACGCGTGTCGAAGGTG
TTTGTCGACATGTTTGACGGTAGAAGCCGCGAGGTCCGGGGCCTTCCCCG
GTCCCCCCCCAAGGTGAGACAAGGGCACATGCACATGCACCAATACTTGT
ACAACGTCTCATTCCCTCTTTCTCTTTCCCATTATGCCCACCTGCATGCC
TCCCTCCACGACAGGAATACTCTTTCTACAAGAGCCTCCAGCAAACCGTC
CTCTCCCGCGCCTTTGTGGAGTCCGCCGTGCATGCCCCCGAGTCCCGTCG
GCTCCTTCTGTACCTCGCCACGTCCGAAGCGCCGGATGAGATATTCTTCC
CCACACTCCTCCACCTCCCTTCCAACCGTGCCCACGCTGCCCGCGCCACC
TGCAATAGCACCCTTCATTTCTCCCACTGGATCCGCCCGGGGGGCAGTTG
GCACCCCGAGTACCTCACCCCATTGCACTTGCCCTTGCTCTTGGAAAAAA
TAAATACCCTTTCGAATGTCTCCTACAAGGAAGTGGGCCTCGTCGATCGC
CCTAGCCCGGGCAAAGTGGCCTACGGTGTAATGGTCTATCAACGACAGAA
CAAAACCGTGTCGGACGTCTTCGACCAATTTACCCGCCTCTTCGATGCCA
TATATTCCCCCAATTTCACCTGTGTGGTGCATGTGGATATCAAGAGCGAG
CCTGCCTTGATCGAAAAAATTACCGACTATGTGAAGAAGCACGCGCCTCA
GGCAAGCACGATCCCCAGTGTGAGCGTGAGTTGGGGGGGAATCACCGTAG
TGGAACGCACGCTGGCGCTGATGCAGGCCGCCTTGGAAAGCGACCCGGAG
TGGGAATATTTCGTCAACATCGGCCAGATGGCACAATGGAACACAGGGAC
GGACATGATTACGTCATATTTGGGAAGAGCTACGATCTTCTGGCGGACGG
CGTCACTCCTCCTCCTGTTTCTCTCAGGGGACGGGCAACTCTTTGTTCAT
AGAAGCGCCAACTACAAGGGAACATGCCGTGCAGGAGGACTACCCCCTAC
AGAGCCCTGCGGCCATCCAGGAGTATCTGGCCCATGCAGTGCCCCCCGCC
ACCAATTTCATATATTGCTGGGACCTGCGCGGGCACGATTTCTTCGGGCA
GTGGGAGCACCACGAAGGACGCGTGTCGAAGGTGTTTGTCGACATGTTTG
ACGGTAGAAGCCGCGAGGTCCGGGGCCTTCCCCGGTCCCCCCCCAAGGTG
AGACAAGGGCACATGCACATGCACCAATACTTGTACAACGTCTCATTCCC
TCTTTCTCTTTCCCATTATGCCCACCTGCATGCCTCCCTCCACGACAGGA
ATACTCTTTCTACAAGAGCCTCCAGCAAACCGTCCTCTCCCGCGCCTTTG
TGGAGTCCGCCGTGCATGCCCCCGAGTCCCGTCGGCTCCTTCTGTACCTC
GCCACGTCCGAAGCGCCGGATGAGATATTCTTCCCCACACTCCTCCACCT
CCCTTCCAACCGTGCCCACGCTGCCCGCGCCACCTGCAATAGCACCCTTC
ATTTCTCCCACTGGATCCGCCCGGGGGGCAGTTGGCACCCCGAGTACCTC
ACCCCATTGCACTTGCCCTTGCTCTTGGAAAAAATAAATACCCTTTCGAA
TGTCTCCTACAAGGAAGTGGGCCTCGTCGATCGCCCTAGCCCGGGCAAAG
TGGCCTACGGTGTAATGGTCTATCAACGACAGAACAAAACCGTGTCGGAC
GTCTTCGACCAATTTACCCGCCTCTTCGATGCCATATATTCCCCCAATTT
CACCTGTGTGGTGCATGTGGATATCAAGAGCGAGCCTGCCTTGATCGAAA
AAATTACCGACTATGTGAAGAAGCACGCGCCTCAGGCAAGCACGATCCCC
AGTGTGAGCGTGAGTTGGGGGGGAATCACCGTAGTGGAACGCACGCTGGC
GCTGATGCAGGCCGCCTTGGAAAGCGACCCGGAGTGGGAATATTTCGTCA
ACATCGGCCAGATGGCACAATGGAACACAGGGACGGACATGATTACGTCA
TATTTGGGAAGAGCTACGATCTTCTGGCGGACGGCGTCACTCCTCCTCCT
GTTTCTCTCAGGGGACGGGCAACTCTTTGTTCATAGAAGCGCCAACTACA
AGGGAACATGCCGTGCAGGAGGACTACCCCCTACAGAGCCCTGCGGCCAT
CCAGGAGTATCTGGCCCATGCAGTGCCCCCCGCCACCAATTTCATATATT
GCTGGGACCTGCGCGGGCACGATTTCTTCGGGCAGTGGGAGCACCACGAA
GGACGCGTGTCGAAGGTGTTTGTCGACATGTTTGACGGTAGAAGCCGCGA
GGTCCGGGGCCTTCCCCGGTCCCCCCCCAAGGTGAGACAAGGGCACATGC
ACATGCACCAATACTTGTACAACGTCTCATTCCCTCTTTCTCTTTCCCAT
TATGCCCACCTGCATGCCTCCCTCCACGACAGGAATACTCTTTCTACAAG
AGCCTCCAGCAAACCGTCCTCTCCCGCGCCTTTGTGGAGTCCGCCGTGCA
TGCCCCCGAGTCCCGTCGGCTCCTTCTGTACCTCGCCACGTCCGAAGCGC
CGGATGAGATATTCTTCCCCACACTCCTCCACCTCCCTTCCAACCGTGCC
CACGCTGCCCGCGCCACCTGCAATAGCACCCTTCATTTCTCCCACTGGAT
CCGCCCGGGGGGCAGTTGGCACCCCGAGTACCTCACCCCATTGCACTTGC
CCTTGCTCTTGGAAAAAATAAATACCCTTTCGAATGTCTCCTACAAGGAA
GTGGGCCTCGTCGATCGCCCTAGCCCGGGCAAAGTGGCCTACGGTGTAAT
GGTCTATCAACGACAGAACAAAACCGTGTCGGACGTCTTCGACCAATTTA
CCCGCCTCTTCGATGCCATATATTCCCCCAATTTCACCTGTGTGGTGCAT
GTGGATATCAAGAGCGAGCCTGCCTTGATCGAAAAAATTACCGACTATGT
GAAGAAGCACGCGCCTCAGGCAAGCACGATCCCCAGTGTGAGCGTGAGTT
GGGGGGGAATCACCGTAGTGGAACGCACGCTGGCGCTGATGCAGGCCGCC
TTGGAAAGCGACCCGGAGTGGGAATATTTCGTCAACATCGGCCAGATGGC
ACAATGGAACACAGGGACGGACATGATTACGTCATATTTGGGAAGAGCTA
CGATCTTCTGGCGGACGGCGTCACTCCTCCTCCTGTTTCTCTCAGGGGAC
GGGCAACTCTTTGTTCATAGAAGCGCCAACTACAAGGGAACATGCCGTGC
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