EWM30599.1, cds74 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|585113271|gb|EWM30599.1| (core-2 i-branching enzyme [Nannochloropsis gaditana]) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0 Query: 1 MAQWNTGTDMITSYLGRATIFWRTASLLLLFLSGDGQLFVHRSANYKGTCRADTLSNVSYKEVGLVDRPSPGKVAYGVMVYQRQNKTVSDVFDQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGHDFFGQWEHHEGRVSKVFVDMFDGRSREVRGLPRSPPKVRQGHMHMHQYLYNVSFPLSLSHYAHLHASLHDRNTLSTRASSKPSSPAPLWSPPCMPPSPVGSFCTSPRPKRRMRYSSPHSSTSLPTVPTLPAPPAIAPFISPTGSARGAVGTPSTSPHCTCPCSWKK 377 MAQWNTGTDMITSYLGRATIFWRTASLLLLFLSGDGQLFVHRSANYKGTCRADTLSNVSYKEVGLVDRPSPGKVAYGVMVYQRQNKTVSDVFDQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGHDFFGQWEHHEGRVSKVFVDMFDGRSREVRGLPRSPPKVRQGHMHMHQYLYNVSFPLSLSHYAHLHASLHDRNTLSTRASSKPSSPAPLWSPPCMPPSPVGSFCTSPRPKRRMRYSSPHSSTSLPTVPTLPAPPAIAPFISPTGSARGAVGTPSTSPHCTCPCSWKK Sbjct: 1 MAQWNTGTDMITSYLGRATIFWRTASLLLLFLSGDGQLFVHRSANYKGTCRADTLSNVSYKEVGLVDRPSPGKVAYGVMVYQRQNKTVSDVFDQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGHDFFGQWEHHEGRVSKVFVDMFDGRSREVRGLPRSPPKVRQGHMHMHQYLYNVSFPLSLSHYAHLHASLHDRNTLSTRASSKPSSPAPLWSPPCMPPSPVGSFCTSPRPKRRMRYSSPHSSTSLPTVPTLPAPPAIAPFISPTGSARGAVGTPSTSPHCTCPCSWKK 377
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|1086562904|emb|SDR05123.1| (Core-2/I-Branching enzyme [Chryseobacterium soldanellicola]) HSP 1 Score: 92.8189 bits (229), Expect = 1.387e-17 Identity = 44/115 (38.26%), Postives = 71/115 (61.74%), Query Frame = 0 Query: 93 DQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWD 207 DQF +LF AIY P+ ++H+D K+ + E++TD++K + P A + S +V WGG ++V+ L M+ LE D W+YF+N+ +DYPL+S I+E+L+ N+I D Sbjct: 35 DQFKKLFKAIYEPSNFYLIHIDKKASEQIGEEVTDFLKNY-PNAHILKSENVIWGGYSMVQAELDGMKYLLEMDTRWDYFINLSGQDYPLKSQKIIREFLSQN--NGKNYIKVVD 146
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|917616973|ref|WP_052186039.1| (glycosyl transferase [Chryseobacterium sp. YR460]) HSP 1 Score: 88.1965 bits (217), Expect = 3.872e-16 Identity = 42/125 (33.60%), Postives = 75/125 (60.00%), Query Frame = 0 Query: 70 SPGKVAYGVMVYQRQNKTVSDVFDQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAH 194 P +AY ++V++ N QF +LF AIY + ++H+D K+ + E++TD++ K+ P + S +V WGG ++V+ L M+ LE D +W+YF+N+ +DYPL+S I+++L+ Sbjct: 2 KPINIAYLILVHRLPN--------QFKKLFKAIYDSSNFYLIHIDKKANEQIGEEVTDFLNKY-PNVHILKSENVIWGGYSMVQAELDGMKYLLEMDAKWDYFINLSGQDYPLKSQKIIKDFLSQ 117
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|1094962520|emb|SER86473.1| (Core-2/I-Branching enzyme [Sphingobium sp. YR768]) HSP 1 Score: 87.8113 bits (216), Expect = 6.321e-16 Identity = 40/101 (39.60%), Postives = 63/101 (62.38%), Query Frame = 0 Query: 93 DQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLA 193 +QF R+F AIY P ++HVD++S P +I I ++K +A + +PS + WGG ++V+ L M LE + +W YF+N+ +D+PL+S A I YLA Sbjct: 13 EQFKRMFRAIYVPGNQYLIHVDLRSGPKMIADIAAFLKPYA-NVAMLPSRKMLWGGYSLVDAELRGMAKLLEMNADWRYFINLSGQDFPLKSQAYIANYLA 112
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|1209258957|ref|WP_088309206.1| (glycosyl transferase [Novosphingobium sp. B 225]) HSP 1 Score: 87.4261 bits (215), Expect = 8.149e-16 Identity = 48/140 (34.29%), Postives = 78/140 (55.71%), Query Frame = 0 Query: 93 DQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGHDFFGQWEHHEGRVSKVFVDMF 232 +QF R+F AI++P +VH+D S AL I +++K + P+A +PS WGG ++V+ L MQ L+ EW++++N+ +D+PL+S I+++L A P T FI R D RV VF+++F Sbjct: 13 EQFKRMFKAIHAPGNRYLVHIDKSSGKALAADIAEFLKSY-PEAEILPSRRALWGGFSLVDAELRGMQHLLDGSTEWQHYINLSGQDFPLKSQGYIRDFL--AAHPGTQFI-----RYADQLLVRPDTMNRVQSVFLELF 144
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|569548919|gb|AHE50540.1| (glycosyl transferase family protein [Aeromonas hydrophila 4AK4]) HSP 1 Score: 87.0409 bits (214), Expect = 9.071e-16 Identity = 44/119 (36.97%), Postives = 71/119 (59.66%), Query Frame = 0 Query: 93 DQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGH 211 DQF RLF AIY + ++HVD +S P L ++I D++ + P A+ +PS + WGG ++V+ L + A LE + EWE+F+N+ +D+PL+S I ++L +F+ D R H Sbjct: 13 DQFKRLFRAIYHHSNHYLIHVDKRSGPELQQEIADFLTDY-PNAAMLPSKNALWGGYSLVDAELRGIAALLEQNQEWEFFINLSAQDFPLRSQRDIHDFLRDH--RGKDFLKVADQRQH 128
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|1175325694|ref|WP_081873487.1| (glycosyl transferase [Sphingobium chlorophenolicum] >gi|662352864|gb|KEQ51367.1| putative Glycosyl transferase [Sphingobium chlorophenolicum]) HSP 1 Score: 87.4261 bits (215), Expect = 9.683e-16 Identity = 52/156 (33.33%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 93 DQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYL-AHAVPPATNFIYCWDLRGHDFFGQWEHHEGRVSKVFVDMFDG--RSREVRGLPRS 245 +QF R+F AIY+P ++H+D S AL +++ ++ + +P+ V WGG ++VE L M+ LE D W +F+N+ +D+PL+S I++YL AH P T F+ C D RVS +F+++F R+R R PR Sbjct: 13 EQFKRMFQAIYAPGNIYLIHIDRNSGKALAQELEAFLAPYQG-VEILPARRVLWGGYSLVEAELRGMRRLLEMDAGWTHFINLSGQDFPLKSQGYIRDYLSAH---PNTQFMRCADQ-----LAIRPDTMNRVSHLFIEVFRRIFRTRIARAFPRG 159
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|918397099|ref|WP_052449374.1| (glycosyl transferase [Aeromonas popoffii]) HSP 1 Score: 86.6557 bits (213), Expect = 1.476e-15 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 0 Query: 93 DQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGH 211 DQF RLF AIY + ++HVD S P L ++IT ++ + P A +PS + WGG ++V+ L + A LE + EWE+F+N+ +D+PL+S + I ++L +F+ D R H Sbjct: 13 DQFKRLFKAIYHDSNHYLIHVDKSSGPELQQEITRFLADY-PNAGMLPSKNALWGGYSLVDAELRGIAALLEQNKEWEFFINLSAQDFPLRSQSDIHDFLRDH--KGKDFLKVADQRQH 128
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|918393422|ref|WP_052445697.1| (glycosyl transferase [Aeromonas encheleia]) HSP 1 Score: 86.2705 bits (212), Expect = 1.519e-15 Identity = 43/118 (36.44%), Postives = 70/118 (59.32%), Query Frame = 0 Query: 94 QFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGH 211 QF RLF AIY + ++HVD +S P L ++I D++ + P A+ +PS + WGG ++V+ L + A LE + EWE+F+N+ +D+PL+S I ++L +F+ D R H Sbjct: 14 QFKRLFKAIYHDSNHYLIHVDKRSGPELQQEIADFLADY-PNAAMLPSKNALWGGYSLVDAELRGIAALLEQNKEWEFFINLSAQDFPLRSQHDIHDFLRDH--KGKDFLKVADQRQH 128
BLAST of EWM30599.1 vs. NCBI_GenBank
Match: gi|1172291926|ref|WP_080675205.1| (glycosyl transferase [Aeromonas hydrophila]) HSP 1 Score: 87.4261 bits (215), Expect = 1.595e-15 Identity = 46/131 (35.11%), Postives = 73/131 (55.73%), Query Frame = 0 Query: 93 DQFTRLFDAIYSPNFTCVVHVDIKSEPALIEKITDYVKKHAPQASTIPSVSVSWGGITVVERTLALMQAALESDPEWEYFVNIGQEDYPLQSPAAIQEYLAHAVPPATNFIYCWDLRGHDFFGQWEHHEGR 223 DQF RLF AIY + ++HVD +S P L ++I D++ + P A+ +PS + WGG ++V+ L + A LE + EWE+F+N+ +D+PL+S I ++L D RG DF + + R Sbjct: 79 DQFKRLFRAIYHHSNHYLIHVDKRSGPELQQEIADFLTDY-PNAAMLPSKNALWGGYSLVDAELRGIAALLEQNQEWEFFINLSAQDFPLRSQRDIHDFLR-------------DHRGKDFLKVADQRQHR 195 The following BLAST results are available for this feature:
BLAST of EWM30599.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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