NO09G03780, NO09G03780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_002292952.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89413.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 143.7 bits (361), Expect = 1.100e-30 Identity = 92/248 (37.10%), Postives = 131/248 (52.82%), Query Frame = 0 Query: 103 IPPVIPAEAQAACLESWTTANEAGTER--SRFDEDLLIYHKYFADRPGDAAPG-FFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKFEFVNLLKQANTGISLHESVYEE---EGQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVKLKSQVLEV---LASNGFVEDTSINVKSSKVFLKQ 342 IP A + C+E W E T+R S ED+ I+ +F P +LE+G DG+ E+N+RF++ CLGWSGLL+E P ++ K N RPN+ L VAPSC L + +S + Y EG++ ++ CGPLS+YL L + IDF SLDVE E +L+T+DF+ + + V++VEV NR D K+K QV +V L G+V S+ V S V+L Q Sbjct: 102 IPNETSATSVEGCVEEWKEEREKWTDRGMSANQEDMTIFQAFFNKPEFFNNPSRTYLEIGAHDGVRESNSRFYDVCLGWSGLLVEPHPDNYAK---NTKLRPNAHHLGVAPSC--------LGNSTGIVSFSQHTYTSAMVEGEVGSLLEIHCGPLSYYLDALDIRHIDFWSLDVEGSELALLKTVDFERVHIDVIIVEVENRLTDD-----PKMKQQVEDVRVLLREKGYVNIQSVFVYMSDVWLHQ 333
BLAST of NO09G03780 vs. NCBI_GenBank
Match: EJK74728.1 (hypothetical protein THAOC_03581 [Thalassiosira oceanica]) HSP 1 Score: 132.9 bits (333), Expect = 1.900e-27 Identity = 94/292 (32.19%), Postives = 137/292 (46.92%), Query Frame = 0 Query: 77 EIHCNDAAKENA-CQGAFEYVP-------------------RLAGAIPPVI----PAEAQAACLESW--TTANEAGTERSRFDEDLLIYHKYFADRPGDAAPGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKFEFVNLLKQANTGISLHESVYEEEGQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVKLKSQVLEVLASNGF-VEDTSINVKSSKVFLKQ 342 E+ CN A NA C+G FEY P R G +I C++ W S + ED +IY +F+ GF++E+G +G+ E+N+RFF+ CL W GLL+EA+ ++ ++ A RP + L VAPSC++ V+ T + EEG L + C PLS+ L +LG+ +DF SLDVE E VL T+DF ++ + V++ E NR D +T +V L G+ + D SI V S VFL Q Sbjct: 68 EVRCNYHAPANATCEGIFEYSPPNTNVTNAQEILRDEASKYRYGGDDRDLIFFPEGFSTPEECIQQWKDNQIKYKDNGMSSWKEDTIIYETFFSSDQRFKTNGFYMEIGAHNGVRESNSRFFDVCLNWKGLLVEANSRNYLRM---AKLRPTAHHLCVAPSCKEPSVVSFPLHLFT-----QGRQNEEGNL---LDIHCEPLSWSLEQLGIRHVDFWSLDVEGVERLVLETVDFDSVQIDVIMAESDNRLADKDTS-----AEEVRRFLKGKGYLLLDQSIAVYKSDVFLHQ 343
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_002293820.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88829.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 120.2 bits (300), Expect = 1.300e-23 Identity = 74/187 (39.57%), Postives = 107/187 (57.22%), Query Frame = 0 Query: 127 TERSRFDEDLLIYHKYFADRPGDAAP--------GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKFEFVNLLKQ---ANTGISLHESVYEEEGQLSWQ----IKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSN 299 ++RSRF ED +IY +F + ++P G ++ELG FDG E+NT FF+ CLGW GLLIEA S+EK+ N RPN+ L+ +P+C++ + V +N GI E+ LS++ IK CGPL+ L ++ + FLSLDVE E VL T+DF L + +++VEV N Sbjct: 122 SQRSRFHEDKIIYDTFFKNMALPSSPEYESPMPKGTYVELGAFDGREESNTMFFDRCLGWDGLLIEAQSQSYEKVIEN---RPNAVKLSYSPTCKEEDQVASFYDYPLSNNGI--------EDVALSYKGKSAIKVPCGPLTSVLLDVFGGAVSFLSLDVEGAESMVLDTVDFTKLRIDIVMVEVQN 297
BLAST of NO09G03780 vs. NCBI_GenBank
Match: OEU11733.1 (hypothetical protein FRACYDRAFT_211151 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 119.0 bits (297), Expect = 2.900e-23 Identity = 69/176 (39.20%), Postives = 104/176 (59.09%), Query Frame = 0 Query: 129 RSRFDEDLLIYHKYFADRPGDAAPGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCE-KFEFVN----LLKQANTGISLHESVYEEEGQLSWQIKAQCGPLSFYLRELGVTK-IDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSN 299 RSR ED IY +F ++ + G ++ELG +DG TE+NT FF+ CLGW GLLIE +P ++ K+ AN RP ++ ++ APSC ++E VN + T + + ++ +G+ + + CGPL L ++ K I F SLDVE E VL TIDFK + + VL++E+ N Sbjct: 134 RSRLGEDSFIYKTFFQEKNITSDDGTYIELGAYDGSTESNTHFFDKCLGWKGLLIEGNPKNYNKVIAN---RPFANKMSFAPSCSAEYERVNHTVPFYRYPMTNVGMADTAKTYQGKPT--VNVPCGPLHPVLEDVFQEKPILFFSLDVEGAEKMVLDTIDFKRVLIYVLMIEIKN 304
BLAST of NO09G03780 vs. NCBI_GenBank
Match: OLQ05425.1 (hypothetical protein AK812_SmicGene11395 [Symbiodinium microadriaticum]) HSP 1 Score: 112.8 bits (281), Expect = 2.100e-21 Identity = 74/240 (30.83%), Postives = 128/240 (53.33%), Query Frame = 0 Query: 119 WTTANEAGTERSRFDEDLLIYHKYFADRPGDAAPGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKAN-APRRPNSDLLNVAPSCEKFEF-VNLLKQANTGISLHESVYEEEGQL--SWQIKAQ-------------CGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVKLKSQVLEVLASNGFVEDTSINVKSSKVFLKQ 342 W A +S+F E+ L+ ++F + + G ++E+G FDG+T +NT +CLGWSG+LIE SP +FE+L+ N RP++ +++ C E + L G++ H + + QL + Q K+ C P+S+YL+ L + +DF SLDVE E VL T++FK + V+V ++E+ R +E + +VL ++A+ G+ E +K S +F+++ Sbjct: 86 WDFARNCFVSKSQFGEEDLVV-EFFGWQ--EKTAGVYVEIGAFDGITYSNTLSLHSCLGWSGMLIEGSPRNFERLRRNLKTTRPSNVVVHFGAVCAPPESNLTFLTGKQAGLAEHGACDGDAKQLLPAAQRKSHHICNIHVDTATVPCKPMSWYLQSLSSSHVDFFSLDVEGSELEVLLTMNFKEVTVEVFMIEMLER-----SESDKQRNWKVLNLMANLGYCECRRAKIKHSSLFVRE 317
BLAST of NO09G03780 vs. NCBI_GenBank
Match: GAQ77796.1 (hypothetical protein KFL_000030730 [Klebsormidium nitens]) HSP 1 Score: 111.7 bits (278), Expect = 4.600e-21 Identity = 71/212 (33.49%), Postives = 111/212 (52.36%), Query Frame = 0 Query: 125 AGTERSRFDEDLLIYHKYFADRPGDAAPGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKFEFVNLLKQANTGISLHESVYE--------EEGQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVKLKSQVLEVLASNGFVEDT 329 AG S+F ED ++ K+F+ +P G F E+GG DG++ +N+ F+E CLGWSG+++E P +F LK N R + L +A E ++ + + + E E G S + CGPL Y+ GVT+IDF SLDVE E +L ++D+ +++ VL+VE+S K + ++ +L S GFVED+ Sbjct: 93 AGPGGSQFGEDKHVFTKFFS-KPAIKRDGVFFEMGGLDGISFSNSLFYEQCLGWSGVMVEGQPDNFFTLKKNR-NREGTRRLWMAGCAEDGGMLSFPARGSAVSGDRSQMTEHFLDNFAGEHGNGS--VLVPCGPLGKYINLAGVTRIDFFSLDVEGAEMLILESMDWSKIELHVLMVEMSG-----------KRRDEIPPLLQSLGFVEDS 289
BLAST of NO09G03780 vs. NCBI_GenBank
Match: OEU09216.1 (hypothetical protein FRACYDRAFT_159750, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 109.4 bits (272), Expect = 2.300e-20 Identity = 75/224 (33.48%), Postives = 109/224 (48.66%), Query Frame = 0 Query: 128 ERSRFDEDLLIYH----------KYFADRPGDAAPGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKFEFV--NLLKQANTGISLHESVYEEEGQLSWQIKAQCGPLSFYLREL---------------GVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVKLKSQVLEVLASNGF 325 ERSRF ED +IY +LELG F+G+ E+NTRFF+ CLGW GLLIEA+P +++ N RP + ++ APSC V + +K N G+ + Y + + CGPLS L ++ + +DF SLDVE E VL TIDF+A+ + VL++E+ N F N +++ QV +A G+ Sbjct: 41 ERSRFHEDKIIYELLXXXXXXXXXXXXXXXXXXXXXTYLELGAFNGVQESNTRFFDDCLGWKGLLIEANPGIYQETIEN---RPFAHKMSFAPSCSAESTVPFHRVKWTNGGLQGYAVAY-NNSKAKPTVDVPCGPLSPVLADIFADDHRDNNNTTTAPVLPTLDFFSLDVEGAEALVLSTIDFQAIRINVLMIEIQNSFCTDNN---CEVRRQVRAKMALEGY 257
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_023717879.1 (uncharacterized protein LOC111870105 [Cryptotermes secundus] >XP_023717880.1 uncharacterized protein LOC111870105 [Cryptotermes secundus] >XP_023717881.1 uncharacterized protein LOC111870105 [Cryptotermes secundus] >PNF23080.1 hypothetical protein B7P43_G09128 [Cryptotermes secundus] >PNF23081.1 hypothetical protein B7P43_G09128 [Cryptotermes secundus]) HSP 1 Score: 108.2 bits (269), Expect = 5.100e-20 Identity = 79/196 (40.31%), Postives = 104/196 (53.06%), Query Frame = 0 Query: 148 GDAAPGFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEKLKANAPRRPNSDLLNVAPSCEKFE----FVNLLKQANTG-ISLHESVYEEEGQLSWQIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNT-EKFVKLKSQVL--EVLASNGFVEDTSINVKSS 336 GD GFF+E G DG T +NT FE L WSGLL+EA PL+F K++ N R+ ++PSC + V+ + N G IS + Y+E G + QC PL YL L T +D+ SLDVE E VLRT+ F+ LD++ + VE + N KFV+ K VL EV+ N D I VKSS Sbjct: 112 GDQKEGFFVECGALDGETRSNTLHFERHLNWSGLLVEADPLNFAKME-NKKRK-----AYLSPSCMSTKPYPIMVSFKQDFNVGKISDYPPGYKEFG----YVDVQCFPLYSYLLALNRTTVDYFSLDVEGSELDVLRTVPFEKLDIRTMSVEFVHVKEGKNVLRKFVERKGYVLHSEVIRENNLAND-FIFVKSS 296
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_012229499.1 (PREDICTED: uncharacterized protein LOC105676311 isoform X1 [Linepithema humile]) HSP 1 Score: 105.1 bits (261), Expect = 4.300e-19 Identity = 70/200 (35.00%), Postives = 108/200 (54.00%), Query Frame = 0 Query: 153 GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEK-LKANAPRRPNSDLLNV--APSCEKFEFVNLLKQANTGISLHESVYEEEGQLSW---QIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVK-LKSQVLEVLASNGF----VEDTSINVKSSKVFLKQ 342 GFF+E G +DG T +NT F E GWSGLLIEA P++F K L+ N + L+V +PS E F + + + + + +++ I+ QC PLS Y+ LGV +D+ SLDVE E VL TI F +D+KVL VE Y N +K +K +K +++++ G+ + S N+ + +F+K+ Sbjct: 138 GFFIECGAYDGETRSNTLFLERFNGWSGLLIEADPINFTKMLQKNRRAYLSPTCLSVINSPSVEFFLMAKNVGRLHEPENTTQDAPTNSPDVAYTGKHIRVQCFPLSVYIAALGVKTVDYFSLDVEGNEIDVLETIPFNEVDIKVLSVE-----YIHNAKKDIKDIKQYMIDMMKQRGYYVYKFVERSDNLANDIIFVKR 332
BLAST of NO09G03780 vs. NCBI_GenBank
Match: XP_012229500.1 (PREDICTED: uncharacterized protein LOC105676311 isoform X2 [Linepithema humile]) HSP 1 Score: 105.1 bits (261), Expect = 4.300e-19 Identity = 70/200 (35.00%), Postives = 108/200 (54.00%), Query Frame = 0 Query: 153 GFFLELGGFDGLTETNTRFFEACLGWSGLLIEASPLSFEK-LKANAPRRPNSDLLNV--APSCEKFEFVNLLKQANTGISLHESVYEEEGQLSW---QIKAQCGPLSFYLRELGVTKIDFLSLDVEAFEYYVLRTIDFKALDVKVLLVEVSNRFYDSNTEKFVK-LKSQVLEVLASNGF----VEDTSINVKSSKVFLKQ 342 GFF+E G +DG T +NT F E GWSGLLIEA P++F K L+ N + L+V +PS E F + + + + + +++ I+ QC PLS Y+ LGV +D+ SLDVE E VL TI F +D+KVL VE Y N +K +K +K +++++ G+ + S N+ + +F+K+ Sbjct: 128 GFFIECGAYDGETRSNTLFLERFNGWSGLLIEADPINFTKMLQKNRRAYLSPTCLSVINSPSVEFFLMAKNVGRLHEPENTTQDAPTNSPDVAYTGKHIRVQCFPLSVYIAALGVKTVDYFSLDVEGNEIDVLETIPFNEVDIKVLSVE-----YIHNAKKDIKDIKQYMIDMMKQRGYYVYKFVERSDNLANDIIFVKR 322 The following BLAST results are available for this feature:
BLAST of NO09G03780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G03780 ID=NO09G03780|Name=NO09G03780|organism=Nannochloropsis oceanica|type=gene|length=1708bpback to top protein sequence of NO09G03780.1 >NO09G03780.1-protein ID=NO09G03780.1-protein|Name=NO09G03780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bpback to top Synonyms
Publications
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