NO09G03650, NO09G03650 (gene) Nannochloropsis oceanica

Overview
NameNO09G03650
Unique NameNO09G03650
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2991
Alignment locationchr9:1051806..1054796 -

Link to JBrowse

Properties
Property NameValue
DescriptiontRNA (cytosine(38)-C(5))-methyltransferase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1051806..1054796 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR001525C5_MeTfrase
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
BLAST of NO09G03650 vs. NCBI_GenBank
Match: EFJ22333.1 (hypothetical protein SELMODRAFT_105635 [Selaginella moellendorffii])

HSP 1 Score: 208.8 bits (530), Expect = 4.200e-50
Identity = 147/426 (34.51%), Postives = 200/426 (46.95%), Query Frame = 0
Query:   79 GGRMKALEFYSGIGGWSEALELAMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTARLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALARRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAW--CFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFAGALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLVWL 503
            G  ++ LEFYSGIGG   +LE A       K D  V  +FEIN +ANDVY          RP    I+ L+V+DL+K     W+LSPPCQPYTR     ++D AD+R++SFL L   + S++ PP ++ +ENV GFETS   +  + VL D G+ +   +++P  F  P  RPRY+ LA+R                                                        PF  S S  +   V  PF      +  V      ET+ + EYLE+          Y VP + +A+   W   +DIV+P S R  CFTKSY ++ +GTGSILY                +DP++     D+ W    +  LRYFTP EVA    FP  F FP H+S K+ Y LLGNSL++ V   LL +L
Sbjct:    5 GAPLRVLEFYSGIGGLRFSLEEA-------KIDATVVEAFEINELANDVYERNFGH----RPNQGNIQRLSVSDLDKYEADAWLLSPPCQPYTRQGL--QKDSADARASSFLKLLDTISSLSIPPAHVFIENVVGFETSHTRSQLIKVLEDTGFRIQECIINPLQFGIPYSRPRYFCLAKR-------------------------------------------------------EPFQFSRSDLNGQLVSCPFDFSTNRDFHV------ETKTVGEYLENP---SDCMEDYMVPSTTIAR---WGEAYDIVTPDSGRCCCFTKSYARYAKGTGSILY--------------FSKDPAEL---SDLAWLQ--SAGLRYFTPREVANFHSFPKGFDFPDHLSIKQRYALLGNSLNIKVVGYLLNYL 331          
BLAST of NO09G03650 vs. NCBI_GenBank
Match: GAX16899.1 (tRNA (cytosine38-C5)-methyltransferase [Fistulifera solaris])

HSP 1 Score: 208.4 bits (529), Expect = 5.400e-50
Identity = 137/430 (31.86%), Postives = 214/430 (49.77%), Query Frame = 0
Query:   82 MKALEFYSGIGGWSEALELAMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTA---RLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALARRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAWCFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRF----EEDMGWQSRFAGALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLVWLLR 505
            ++ +EFY+G+GGW+ AL+  +    RG  D+     FE     +     +V      +P     R I+ LTV  +E     L+++SPPCQP++R +  +KR+  D RS SFLHLC LLQS+++ P  I LENV GFE S+  + F  VL+DR Y   H +L P+    PN+RPR+Y++                                       A +   +++    W+ K    +    S   ++ V+    + E G +A+    E +  +++ +L++           ++P  +  K +AWC DIV+P  RR+SCFT  Y KF+RGTGS+LY       GE   E++   P +R +    ++D+ W        RYF+  E+ARL  F + FAFP  VS  + ++L+GNSL+V VA  LL +  R
Sbjct:   22 IRFVEFYAGVGGWTMALQQVVE---RGHSDLS-GLRFECVAALDHSDLCKVVYEHNHKPVTLSNRPIQKLTVGQVEGWQADLFVMSPPCQPHSRQHTHQKRELQDKRSESFLHLCELLQSLSTVPSVILLENVVGFERSQSFSFFQKVLKDRNYRCCHFILQPSQVGLPNDRPRFYSV---------------------------------------AVQNDYIKLEKDSWQAK----YFTKPSDDISADVIIQTEIPELGVKAMNSITEKDIPKLQHFLDNSPD-----PRLSIPEKVHQKRAAWCLDIVTPEQRRTSCFTSGYGKFVRGTGSVLY------TGEGTFELVA--PEQREYDAEWDKDLDWTK-----ARYFSGSELARLFDFSNDFAFPRTVSVGQQWKLVGNSLNVRVAARLLEFAFR 386          
BLAST of NO09G03650 vs. NCBI_GenBank
Match: GAX28335.1 (tRNA (cytosine38-C5)-methyltransferase [Fistulifera solaris])

HSP 1 Score: 207.2 bits (526), Expect = 1.200e-49
Identity = 135/426 (31.69%), Postives = 216/426 (50.70%), Query Frame = 0
Query:   82 MKALEFYSGIGGWSEALELAMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTA---RLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALARRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAWCFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFAGALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLVWLLR 505
            ++ +EFY+GIGGW+ AL+  +    RG  D+     FE     +     +V      +P     R I+ LTV  +E+    L+++SPPCQP++R +  ++R+  D RS SFLHLC L+QS+++ P  I LENV GFE S+  + F  VL+DR Y+  H +++P+    PN+RPR+Y++                                       A +   +++    W+ K    F    S   ++ V+    + E G  A+    E +  +++ +L++           ++P  +  K +AWC DIV+P  RR+SCFT  Y KF+RGTGS+LY       GE   E++   P +R ++ +   +  +  A RYF+  E+ARL  F + FAFP  VS  + ++L+GNSL+V VA  LL +  R
Sbjct:   22 IRFVEFYAGIGGWTMALQQVVE---RGHSDLS-GLRFECVAALDHSDLCKVVYEHNHKPVTLSNRPIQKLTVGQVEEWQADLFVMSPPCQPHSRQHTHQERELQDKRSESFLHLCELIQSLSTVPSVILLENVVGFERSQSFSYFQKVLKDRNYQCCHFIINPSQVGLPNDRPRFYSV---------------------------------------AVQNNYIKLEKDSWQSK----FFTKPSDDISAEVIIHTEIPELGVNAMNSIIEKDIPKLQHFLDNPPD-----PRLSIPEKVYQKRAAWCLDIVTPEQRRTSCFTSGYGKFVRGTGSVLY------TGEGTFELVA--PEQREYDAEWDKELDWTKA-RYFSGSELARLFDFSNEFAFPRTVSLGQQWKLVGNSLNVRVAARLLEFAFR 386          
BLAST of NO09G03650 vs. NCBI_GenBank
Match: XP_024537466.1 (tRNA (cytosine(38)-C(5))-methyltransferase isoform X1 [Selaginella moellendorffii])

HSP 1 Score: 207.2 bits (526), Expect = 1.200e-49
Identity = 147/426 (34.51%), Postives = 200/426 (46.95%), Query Frame = 0
Query:   79 GGRMKALEFYSGIGGWSEALELAMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTARLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALARRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAW--CFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFAGALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLVWL 503
            G  ++ LEFYSGIGG   +LE A       K D  V  +FEIN +ANDVY          RP    I+ L+V+DL+K     W+LSPPCQPYTR     ++D AD+R++SFL L   + S++ PP ++ +ENV GFETS   +  + VL D G+ +   +++P  F  P  RPRY+ LA+R                                                        PF  S S  +   V  PF      +  V      ET+ + EYLE+          Y VP + +A+   W   +DIV+P S R  CFTKSY ++ +GTGSIL       K         +DP++     D+ W    +  LRYFTP EVA    FP  F FP H+S K+ Y LLGNSL++ V   LL +L
Sbjct:    5 GAPLRVLEFYSGIGGLRFSLEEA-------KIDATVVEAFEINELANDVYERNFGH----RPNQGNIQRLSVSDLDKYEADAWLLSPPCQPYTRQGL--QKDSADARASSFLKLLDTISSLSIPPAHVFIENVVGFETSHTRSQLIKVLEDTGFRIQECIINPLQFGIPYSRPRYFCLAKR-------------------------------------------------------EPFQFSRSDLNGQLVSCPFDFSTNRDFHV------ETKTVGEYLENP---SDCMEDYMVPSTTIAR---WGEAYDIVTPDSGRCCCFTKSYARYAKGTGSILVTNPSFYK------YFSKDPAEL---SDLAWLQ--SAGLRYFTPREVANFHSFPKGFDFPDHLSIKQRYALLGNSLNIKVVGYLLNYL 339          
BLAST of NO09G03650 vs. NCBI_GenBank
Match: XP_024534053.1 (DNA (cytosine-5)-methyltransferase isoform X1 [Selaginella moellendorffii])

HSP 1 Score: 203.4 bits (516), Expect = 1.800e-48
Identity = 146/423 (34.52%), Postives = 198/423 (46.81%), Query Frame = 0
Query:   82 MKALEFYSGIGGWSEALELAMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTARLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALARRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAW--CFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFAGALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLVWL 503
            ++ LEFYSGIGG   +LE A       K D  V   FEIN +ANDVY          RP    I+ L+V+DL+K     W+LSPPCQPYTR     ++D AD+R++SFL L   + S++ PP ++ +ENV GFETS   +  + VL D G+ +   +++P  F  P  RPRY+ LA+R                                                        PF  S S  +   V  PF      +  V      ET+ + EYLE+          Y VP + +A+   W   +DIV+P S R  CFTKSY ++ +GTGSIL       K         +DP++     D+ W    +  LRYFTP EVA    FP  F FP H+S K+ Y LLGNSL++ V   LL +L
Sbjct:    4 LRVLEFYSGIGGLRFSLEEA-------KIDAMVVEVFEINELANDVYERNFGH----RPNQGNIQRLSVSDLDKYEADAWLLSPPCQPYTRQGL--QKDSADARASSFLKLLDTISSLSIPPTHVFIENVVGFETSHTRSQLIKVLEDTGFRIQECIINPLQFGIPYSRPRYFCLAKR-------------------------------------------------------EPFQFSRSDLNGQLVSCPFDFSTNRDFHV------ETKTVGEYLEN---ASDCTEDYMVPSTTIAR---WGEAYDIVTPDSGRCCCFTKSYARYAKGTGSILVTNPSFYK------YFSKDPAEL---SDLTWLQ--SAGLRYFTPREVANFHSFPKGFDFPDHLSIKQRYALLGNSLNIKVVGYLLNYL 335          
BLAST of NO09G03650 vs. NCBI_GenBank
Match: EFJ25562.1 (hypothetical protein SELMODRAFT_98974 [Selaginella moellendorffii])

HSP 1 Score: 202.6 bits (514), Expect = 3.000e-48
Identity = 145/423 (34.28%), Postives = 197/423 (46.57%), Query Frame = 0
Query:   82 MKALEFYSGIGGWSEALELAMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTARLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALARRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAW--CFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFAGALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLVWL 503
            ++ LEFYSGIGG   +LE A       K D  V   FEIN +ANDVY          RP    I+ L+V+DL+K     W+LSPPCQPYTR     ++D AD+R++SFL L   + S++ PP ++ +ENV GFETS   +  + VL D G+ +   +++P  F  P  RPRY+ LA+R                                                        PF  S S  +   V  PF      +  V      ET+ + EYLE+          Y VP + +A+   W   +DIV+P S R  CFTKSY ++ +GTGSIL                 +DP++     D+ W    +  LRYFTP EVA    FP  F FP H+S K+ Y LLGNSL++ V   LL +L
Sbjct:    4 LRVLEFYSGIGGLRFSLEEA-------KIDAMVVEVFEINELANDVYERNFGH----RPNQGNIQRLSVSDLDKYEADAWLLSPPCQPYTRQGL--QKDSADARASSFLKLLDTISSLSIPPTHVFIENVVGFETSHTRSQLIKVLEDTGFRIQECIINPLQFGIPYSRPRYFCLAKR-------------------------------------------------------EPFQFSRSDLNGQLVSCPFDFSTNRDFHV------ETKTVGEYLEN---ASDCTEDYMVPSTTIAR---WGEAYDIVTPDSGRCCCFTKSYARYAKGTGSILVTNPS----------FYKDPAEL---SDLTWLQ--SAGLRYFTPREVANFHSFPKGFDFPDHLSIKQRYALLGNSLNIKVVGYLLNYL 331          
BLAST of NO09G03650 vs. NCBI_GenBank
Match: XP_002185148.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43280.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 201.4 bits (511), Expect = 6.700e-48
Identity = 133/421 (31.59%), Postives = 217/421 (51.54%), Query Frame = 0
Query:   82 MKALEFYSGIGGWSEALELAMRQL-GRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTARLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASP--PGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALARRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAWCFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFAGALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELL 500
            ++ +EF++G+GGW+ AL+ A++ +      ++  SA+ + + +  +V+     +       A  IE LT+N + +    +WM+SPPCQP+TR +  + ++  D RS SFLHLC LL  + S   P  I LENV GFE+S+ C  + ++L+ R Y + H  L+P     PN+RPRY+ LA R                               S       +  L+        KT        + S   P+ P  +L     + +  +   +   + E+L+ D   E   ++  +P S+L + +AWCFDIV+P S RS+CFT SY KF++GTGS+LY       G   + I + +P  R+F++           LRYF+  E+AR+  FPS+F+FP  ++ K+ ++L+GNSL+V VA +L+
Sbjct:    7 LRYVEFFAGVGGWTMALQEAIQIVYPSDPPELFCSAALDHSDLCIEVFE---HNHSLVIQKAVRIEKLTMNQIFEYRADIWMMSPPCQPHTRQHSNQDQELEDPRSRSFLHLCDLLLELPSENLPKLIFLENVVGFESSQSCRKWNTILQSRQYIIKHFHLNPTQVGVPNDRPRYFCLAVR-------------------------------STEIHDSNDNDLQFHV---HAKT------KMADSDLRPITPDTNLPNLNIKGLR-DSTVKVSSVAEFLDKDL-TEHQKTSLRIPQSILQRNAAWCFDIVTPESLRSACFTSSYGKFVKGTGSVLY------TGPYRDRIRLTNPEDRKFDDAWDQGLDLPKHLRYFSGSELARIFGFPSTFSFPETITRKQQWKLIGNSLNVRVAAKLV 376          
BLAST of NO09G03650 vs. NCBI_GenBank
Match: XP_002282454.2 (PREDICTED: tRNA (cytosine-5-)-methyltransferase [Vitis vinifera])

HSP 1 Score: 193.0 bits (489), Expect = 2.400e-45
Identity = 141/430 (32.79%), Postives = 202/430 (46.98%), Query Frame = 0
Query:   83 KALEFYSGIGGWSEALELAMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTARLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALARRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVF---PPVWRGKTL----PPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAWCFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFAGALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLVWLLRE 506
            + LEFYSGIGG   +L+       RG  + ++  +F+IN +ANDVY          RP    I+SLT  DL++     W+LSPPCQPYTR     ++   D+R+ SFL +  L+Q    PP  + +ENV GFETS+     + +L   G+     +LSP  F  P  RPRY+ LA+R                               SP  G E++  +        +W  K L    P        ++ +P+    S  +    + +  GE E        E DR     W  ++VP SL+ +  +   DIV P S+R  CFTKSY+++++GTGS+L     G+  +++  +L         EE           LRYFTP EVA L  FP  F FP HV+ ++ Y LLGNSL V V   LL +L  +
Sbjct:   15 RVLEFYSGIGGMRYSLK-------RGGVNAKIVEAFDINNIANDVYQHNFGH----RPCQGNIQSLTAADLDRYRAHAWLLSPPCQPYTRQGL--QKHSGDARAFSFLKILELIQHTLHPPLMLFVENVVGFETSDTHEKMIEILSKTGFVTQEFILSPIQFGVPYSRPRYFCLAKR-------------KPLSFENQLFNNQLLSTPSPLFGHEDDSLIDEHDQSEKIW-DKLLQSCEPVERFLEFKNTINPLETESSYLDTLSVSTDASGELENN------ERDRSDSNSWDQFSVPLSLIERWGS-AMDIVYPDSKRCCCFTKSYYRYVKGTGSLL---ATGQSKKDKASLL---------EEQ---------CLRYFTPREVANLHSFPEDFHFPQHVNLRQRYALLGNSLSVAVVAPLLTYLFTQ 389          
BLAST of NO09G03650 vs. NCBI_GenBank
Match: XP_022132298.1 (DNA (cytosine-5)-methyltransferase isoform X1 [Momordica charantia])

HSP 1 Score: 193.0 bits (489), Expect = 2.400e-45
Identity = 144/429 (33.57%), Postives = 196/429 (45.69%), Query Frame = 0
Query:   78 EGGRMKALEFYSGIGGWSEALELAMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTARLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALA-RRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAWCFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFAGALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLVWLLRE 506
            +G   + LEFYSGIGG   +L      L  G  D +V  +F+IN  ANDVY     D    RP    IESLT  D++     +W+LSPPCQPYTR     ++   D+R+ SFL +  L+   + PP  + +ENV GFETS+     + +L    +     +LSP  F  P  RPRY+ LA RR                               +  + A  +  L    P+ R      FL  +S  S        S++ EG  A+E     +T+        D   +G +  Y VP SL+ +  +   DIV P SRR  CFTKSY+++++GTGS+L      K G+                      S     LRYFTP EVA L  FP  F FP H+  ++CY LLGNSL + V   LL +L  E
Sbjct:    9 QGEPWRVLEFYSGIGGMRYSL------LSAG-VDAKVVQAFDINDKANDVYEHNFGD----RPYQGNIESLTAADIDSYQAHVWLLSPPCQPYTRQGL--QKHSGDARAFSFLKILELMLQTSRPPVMLFMENVVGFETSDTHTKMIEILEKADFSRQEFILSPMQFGVPYSRPRYFCLAKRRPLSFHRLLYNNQLLWSPSPLLENDVDIETIENHGSQATSDKLLLSCEPICR------FLDHSSHHSEFSFSDASSIQREG--ALE-----KTK--------DTDEQGSFDQYLVPSSLIDRWGS-AMDIVYPDSRRCCCFTKSYYRYVKGTGSLLAPFEEEKMGKA--------------------HSLKEQKLRYFTPREVANLHSFPEDFQFPQHIGLRQCYALLGNSLSIAVVAPLLRYLFAE 382          
BLAST of NO09G03650 vs. NCBI_GenBank
Match: KNE72247.1 (DNA (cytosine-5-)-methyltransferase [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 192.6 bits (488), Expect = 3.100e-45
Identity = 151/458 (32.97%), Postives = 203/458 (44.32%), Query Frame = 0
Query:   65 TTTISRRXXRDKGEGGRMKALEFYSGIGGWSEALELAMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTARLIESLTVNDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMASPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNERPRYYALARRGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAAGAEEEGTLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGETRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAW----CFDIVSPTSRRSSCFTKSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFAG-------------ALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLVWLLRE 506
            T  I+     D    G ++ LEFYSGIGG   AL+ A      G ED +V  +FEIN +AN VYA       +   +   IE+L+     K    LW +SPPCQPYTR   ++K    D+R+ SF HL  +L+++   P Y+ LENV+GFE S+     +++L   GY     +L+P  F  PN R RYY +AR                                +     E+                     +   S  + VLP       G EAVE     E R +RE+LE ++           PP        W     FDIV+P+ RRS CFTK+YF F  GTGS+L         +E E I I D      E      +  A               +RYFTP EVA L+ FP+ F FPA  S K+ Y LLGNS++V V + L+ +LL E
Sbjct:   46 TANINVPQPDDTVSTGNLRVLEFYSGIGGMHYALKAA------GYEDAEVLKAFEINNVANAVYAHNF---GKGIVSQNNIEALSAAHYNKFRADLWTMSPPCQPYTRQKSSKKEGSQDARAKSFFHLLDVLKTIEHRPKYLLLENVKGFEDSDSRDALVTMLASLGYHYREFLLNPLDFGIPNSRLRYYLVAR------------------------------STARFTSCEQH--------------------TVDGSPFATVLP-------GMEAVE-----EPRALREFLETEK---------MDPPQTWKPAVVWKRTPLFDIVTPSLRRSCCFTKNYFHFAEGTGSVL---------QENEAISINDVWPTFLERQPAALASLAANTPVDVENPLVPLRMRYFTPREVANLLCFPTDFTFPASTSLKQQYRLLGNSINVLVVSRLMRFLLAE 414          
The following BLAST results are available for this feature:
BLAST of NO09G03650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EFJ22333.14.200e-5034.51hypothetical protein SELMODRAFT_105635 [Selaginell... [more]
GAX16899.15.400e-5031.86tRNA (cytosine38-C5)-methyltransferase [Fistulifer... [more]
GAX28335.11.200e-4931.69tRNA (cytosine38-C5)-methyltransferase [Fistulifer... [more]
XP_024537466.11.200e-4934.51tRNA (cytosine(38)-C(5))-methyltransferase isoform... [more]
XP_024534053.11.800e-4834.52DNA (cytosine-5)-methyltransferase isoform X1 [Sel... [more]
EFJ25562.13.000e-4834.28hypothetical protein SELMODRAFT_98974 [Selaginella... [more]
XP_002185148.16.700e-4831.59predicted protein, partial [Phaeodactylum tricornu... [more]
XP_002282454.22.400e-4532.79PREDICTED: tRNA (cytosine-5-)-methyltransferase [V... [more]
XP_022132298.12.400e-4533.57DNA (cytosine-5)-methyltransferase isoform X1 [Mom... [more]
KNE72247.13.100e-4532.97DNA (cytosine-5-)-methyltransferase [Allomyces mac... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR076ncniR076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03650.2NO09G03650.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G03650.1NO09G03650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|349160gene_10352Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03650.2NO09G03650.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G03650.1NO09G03650.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03650 ID=NO09G03650|Name=NO09G03650|organism=Nannochloropsis oceanica|type=gene|length=2991bp
ACTGGTGATCTCTATTTATTTCCTATGTGGACGTGGGGGGAGGACATGGA
TGGATGAAATGGATGAGAGGGTTCGTGGATAGATACGGGCGACCAAGAAG
GAGCCGAGCATTTCGCTCGAGCCGTCCACAACGCTTTTTGCCGTTCCTCT
CGACACACTACCACGCACACACAAACACACACCATAGATGCCCAGTGGCT
GCCTACTCCTGACGCTATTCTCCTTGTTGCTGCTATTCCTCCTACCTCCG
CGATCGTCTGGTTTTTTTGTGCCACTCCCTCCAAATTCCCACCCTTTGAC
CCCTGCTTGTATACGCTCCTTGGCATACGCCTCCTTCACGAGGAGGTGCC
TTTCTCACGACAGTCGTATGGACGGCACCACCACTACAATTTCGAGGAGA
AGAAGGAGGGATAAAGGGGAGGGAGGGAGGATGAAAGCTTTGGAGTTCTA
TAGTGGTATTGGCGGCTGGAGCGAGGCCTTGGAATTGGCAATGCGACAAC
TAGGAAGGGGAAAGGAAGACGTGCAGgtgggtgggtgatgaaatggagga
aggcgggtagaggatttcggaaaatggaccttttcgcagtgattgtaagc
aaatatgtcttctgtcttctgaacaccacgttttggaagcttggccaacc
cacccttccctccctatctctttcccctccccccccgggccctcacttcc
agGTATCTGCCTCGTTCGAGATCAACTTGATGGCCAATGATGTCTATGCC
GCGCAAGgtcacgatagaagggggggaagggagggacagaggaggggggc
aggagaacaaaaggatgtcaccctggttagcgcacaactcctcgcttatc
taccctgtatctccccccctccttccctcccttcctccccccctccttcc
tttgtagTCAAGGATCCCCCTCGTCCACGCCCTACCGCTCGTCTGATCGA
GTCCCTGACAGTCAATGATTTGGAAAAGCAGGCCGTTGCGTTGTGGATGC
TCTCTCCGCCATGCCAGCCCTACACGCGCAATAACAAGACGgtagggaga
gagggagagagggagagagggagggaggggaggagggaggaaggaaagta
atgacgtaatttaaaaaatccgctactttctaacacgttcacattcccct
catgcacctccattccctccactcgtttattgatactcctctcatgcacc
tccttctcctccactcgtgtgcacttcagGAAAAACGAGACAAGGCCGAC
TCTCGCTCTGCCTCTTTTCTCCATCTTTGTGCGCTTTTGCAGTCGATGGC
CTCTCCTCCGGGTTACATCGCGTTGGAAAATGTAGAGgtgagggagggag
ggagggagggagggtgggagggagtgtatagggtggtacttcaattctgg
cctggatgtcatccgtcctcttaccctccctgcttccctccctccgctcc
tccctctttttcagGGGTTTGAGACGAGCGAATGTTGCGCCCTTTTCCTC
TCGGTCCTGCGTGATAGGGGCTATGAGGTATGGCATGGCGTTCTGTCCCC
TGCTCTCTTTAGGTGGCCCAATGAACGCCCGCGGTACTACGCCTTGGCAA
GGAGGGGAAGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCCGGGCGGG
GACGGGGGAGGGGGAGGAGGAGGAGGGGGAGGTGAAGGAGGGAGAAGGTC
ACCGGCTGCAGGTGCTGAGGAGGAGGGGACTTTAAGGGTCTTTCCGCCTG
TATGGCGGGGGAAAACCCTCCCTCCCTTCCTTGCCTCCGCTTCCTCTTCC
TCGACCTCACCCGTCCTCCCTCCCTTCTCTTTGAAGGAGGAAGGGGAAGA
GGCGGTGGAGGGGGAGGGGGAGGGGGAGACGAGGCAGATTCGAGAGTACC
TCGAGCATGACCGGGGAAGAGAGGGGTTGTGGAGTACTTACGCCGTTCCT
CCCTCCCTTCTTGCCAAGCCGTCTGCTTGGTGCTTTGACATTGTCTCGCC
CACGAGCCGGCGgtacgaggggggggtcccagagggagggagggaaggag
ggagggatgagagggaatgtggtgtagctacgccatgtctcattttgtct
caatcaaacgacccaatcctccctccctccctccctccctccctccctcc
ctccctccttcccttgattcgtttgcccctctttttgtcatccacagtgt
tggttctgattttcacctcttccccttcctccctccctccctcccccccc
ctctttcagCTCCTCCTGCTTCACTAAATCGTACTTCAAGTTCATCCGGG
GCACTGGCTCCATTCTCTATGACAAGACACGAGGGAAGAAGGGGGAAGAA
GAGGAGGAGATTCTGATCCAGgtacgtttcgaaggggagggaaggaagga
gggagtgaaggagggggtggcctcctgcatgcattcattcattcctatat
gtccgcagGATCCGTCCAAAAGGAGGTTCGAGGAGGACATGGGCTGGCAA
TCGCGTTTCGCAGGGGCCTTGAGgtagatagtggtgggagggagagaggg
atgggcgggaggggaggaagcgagggacggaaggagacaggtggtttagc
cgtatctttccttcagatcttccacgtcctctttccctctctcccaacgc
tttcttctatgtatattaacagGTACTTCACTCCAATGGAGGTGGCGCGC
CTGATGCACTTCCCATCCTCTTTTGCCTTCCCTGCCCgtacgttcctcac
cctttttcccttccctccctcgcaccctgattccttcattcattccatcc
tttcactcaccctcctcccctctctccttctatccctccctcccttcctt
gtagATGTTTCTGACAAGAAATGCTACGAGCTTCTGGGGAACAGTTTGCA
TGTGGGAGTGGCCACGGAGCTGTTGGTGTGGTTACTGAGGGAGGACGAGA
GGGATGGAGGGATGGAGGGATGGAGGGCTGTAGAGGGGTAG
back to top

protein sequence of NO09G03650.2

>NO09G03650.2-protein ID=NO09G03650.2-protein|Name=NO09G03650.2|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp
MHLHSLHSFIDTPLMHLLLLHSCALQEKRDKADSRSASFLHLCALLQSMA
SPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNER
PRYYALARRGRGREGGREGGRPGGDGGGGGGGGGGEGGRRSPAAGAEEEG
TLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGE
TRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAWCFDIVSPTSRRSSCFT
KSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFA
GALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLV
WLLREDERDGGMEGWRAVEG*
back to top

protein sequence of NO09G03650.1

>NO09G03650.1-protein ID=NO09G03650.1-protein|Name=NO09G03650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=521bp
MPSGCLLLTLFSLLLLFLLPPRSSGFFVPLPPNSHPLTPACIRSLAYASF
TRRCLSHDSRMDGTTTTISRRRRRDKGEGGRMKALEFYSGIGGWSEALEL
AMRQLGRGKEDVQVSASFEINLMANDVYAAQVKDPPRPRPTARLIESLTV
NDLEKQAVALWMLSPPCQPYTRNNKTEKRDKADSRSASFLHLCALLQSMA
SPPGYIALENVEGFETSECCALFLSVLRDRGYEVWHGVLSPALFRWPNER
PRYYALARRGRGREGGREGGRPGGDGGGGGGGGGGEGGRRSPAAGAEEEG
TLRVFPPVWRGKTLPPFLASASSSSTSPVLPPFSLKEEGEEAVEGEGEGE
TRQIREYLEHDRGREGLWSTYAVPPSLLAKPSAWCFDIVSPTSRRSSCFT
KSYFKFIRGTGSILYDKTRGKKGEEEEEILIQDPSKRRFEEDMGWQSRFA
GALRYFTPMEVARLMHFPSSFAFPAHVSDKKCYELLGNSLHVGVATELLV
WLLREDERDGGMEGWRAVEG*
back to top
Synonyms
Publications