NO09G03040, NO09G03040 (gene) Nannochloropsis oceanica

Overview
NameNO09G03040
Unique NameNO09G03040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4979
Alignment locationchr9:884589..889567 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:884589..889567 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014840HRD
Homology
The following BLAST results are available for this feature:
BLAST of NO09G03040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010838NSK010838Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G03040.1NO09G03040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G03040.2NO09G03040.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|18772gene_4239Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G03040.1NO09G03040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G03040.2NO09G03040.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G03040 ID=NO09G03040|Name=NO09G03040|organism=Nannochloropsis oceanica|type=gene|length=4979bp
TAATGCAAGGTGCGGGTGTTTGTCGGTCGCAGCCATGTTTGCTTGTTGAC
TTATTGCGTGTATCGATGGTGTTGTCATGTGGTTGGTCCTTCGTGGGGAG
GATGATGAAGGGGAACGGCCTAGGTAATGGCCTTCCCCCTCCCTCCCCCC
CTCCCATGGCATCGGCCGCAGAAACGTCTCGCCGGGAAGCGTCGAGACGT
TTCTTGTTTTTCCGTCTGTGGCCCTGCTCCCTCGACTTCTCCCTCCATCA
TTTCCCTTCCTTATTTCTCTCAACATCCTTCCGTTGGCTTTTGAACGCCT
GGAGTCGGTTAACCTGTCGCTCTTTTGTCCAAAGCATGGGCGGATTTTCT
ATCATCCTTCTCGCGAACGTGTTACCGCTGTCTGTTGTCAAGGAGCCAAC
AGAGCAAAGGGGAGGATCGACTGCTTCCCTTTCTGTTTCATTTGTCCAGG
GAGCAAACCATAACGCCCAACAAAACATTTTTTCTGGTTTTGAATCTATC
GTACATACACGCACGCGCGCGCGTACACACACACATGTTCAGGAGGGAAA
GAGAGAGTAAGTCTCAAACCTCCAGCGCCATGTCCACCATCGTCTCCCTT
TCTCTTTCTATGTCTAACGCCTCACCACCTCCCACGCTATCCGCACTTAC
TTCGCTGCCATCCGCTTCTCTCCCCCTCCCGCATACTTGGCCTTGCCGTT
ACTCCACGGCACGTACCGATGTTTGATCATATGCCGAATCTGTCTCTTCA
TCGTCAATACAAACAGACTTATAAAGTACAACAAGAGAATCGGCCAATAA
ACCGGCACGTCAAAAAAATCAAAAAACGTCATTCCAAATGCCACCCATGT
CGCCTTCGCGCATTGGTACCAAAATTTAAATTCCGGCAACCGTCGGGCAA
ACGGTCGATATTCTTCCCTCTCATTCGTTGGTAGTAAGGGACCTTCTGAT
TCTGGGTCCATCTGCGGGGAAAGGAATCCGATAAAGTTGTTCAGGAGGTA
GATACCCAAGCCGTAGGTCACAATGAACCAGCCATTAATGTAGAATACAC
GTAAGGCGTATAGGCCGAGCATGACAACAAAGATAACCCAACGAAGGCCG
ACGTACACGGTGGAGCGATCCAGGATGTGTTGCCATTTTCTGTGTTCGCG
TGAGGGGAAAAATTGGGGTTTTGTTAAGCAATTTTTGAACTCGCGAAAGG
CGCTGTGAACATAGTGAGCACGACCACCAAGAGGATCATCCAAGGGCTGA
CATGGTGTGTGGAGAAATTTTCAAACTGTGTATGGTCATTGTTAGACTGA
AGATAGGTTGGAAGGGCGAGAGTGGGTTGGTGATGGGGTGGTGAAAGCGC
ATCCGGTGATCAATGGTTGATGGTTCCGTCCGTCAAGATGTCAATGATGC
ACAGCCCTATCTACCGACAAGAGAAATCATCGCATCAAACGCACGGGAAT
ATGCACACATACTCTTACGAGCATATCTCAAAGGTAAACATGCATTGCAC
AACGTTTCACCGAGAGCATGGTGGGTAAAGCGGGAAGAGACTTAGTAACT
CTCCCTCTCACACATGCCATCAATCCATCGAGCATCTTCTCACCCACGCA
TTTCCTAACGCCATTACACCATATCCAGATAGCGACAATGATGAGCAGCG
AGGCTTTTCAAGCACCAGACACACATTCACCCGTACACCACCCGCCACAT
GACCCACCCACGCAGTCCACCCACCCATACACAAGACCTAGAGTAAATAA
AGCACGTACCTTTGCAGGGACACTGCCACCTGCTCCACAAAGCTTGGATC
TCCATCCGATTCCATCATTGTACAGGCGTCTGTCGCGCGGCGCGGGGCTT
ACGTGTGGGTAGGTGGTGCAGAGATGCAAGGGTTCCGCTCACGAAGCAAC
GCTTTTGAGCGAGAGAAGCCCTTCTCTGGGAGGGAGACTTTTCAGGGCAC
GACACCCAGAGCAACCTATAAGTAGGCTTGAAGGTCTACGACGACAACGA
CGGGGAAATGACTTTGACCTACGTTTGCGGTGGTGGGTTTGGGGTGTATG
TGTGATTTATTTGCCTAGGAGGGTTTCTTTGGTAGAGAGCATCCAGCCAG
AACTGTGACGGCGATAGGCGAGGCCCACTTGCAATGTTCATTTTTGATGT
GTTTCTCATTCTACACATCCCGCAGCGCACACCCACAGGCGACACACGCG
CCGGGACAGGCAAGATAAGGCTGTCAATTGCCTACAACACCACTGCTCCC
TTATCATGTCGCCTTCCCTTCACATGCCACTTGCCTTCCTCACTCAGCCG
GACCCTCTCCTCCCAAATAAATTCACGTTTTCACACATGTACAGCCCCAG
CCCCACGACCATAATGGGCAAATACAAATCAAAACACCGCGTCCGCGTAG
TCTTGTCCGATCTGAAGGAACCTGAGTTCTCTTTAGGCGCGCTCTTGGGC
CACAGCAACAGCACTGGGGACGACGCGCGgtaaggaccggagaggaaagc
aggaagggaaggggccaattaagaatgaaggggacagtgtatgcatggac
gtgtcgaaaagaatacacgaaccacatttatcttcagcttgaattggtgt
cgtaatgttgggcgcggcgaagaaaaaggcctttgacattactgctcctt
tcgttgtacatgcgcatacgggcactcgcacttgatcgcgagacacagag
ggtgtctgcgaccaaaatacgacgattgcgaagtgttacatttggacttc
ccctacacgcgcaacgttccttgcaattacctcacccgcactatcctttt
cacccttcattgtcttcctcatgcagCAAGAAGAAAAAGAAGAAAAACAA
ACCCTCTCCCCTTTCCGACGACGAAGAATCTTTCAACGATCCACGGGGGA
TCGGAAACTTTATAAAGATGTTGGAAACGAAGTATTGTGGTCATGCTGGA
ATGAGGAGTGGCCAGGGGGGGGAGGAAGGAGGAAGTAAGAAGCGGGCGCA
CAAGCATgtaggtttggggaggggtggggtgattgcagcatgcctcttgt
tttgttcaggcggtctttagcatggcttctctcttaacatgccttgcaat
tgagtatatctctgacctctttcttcctccataatctacccccttccctc
ttttcctccctccctcccgcccccagGACCTCTATGATCTGGATGATGAC
ATCATTGACGACTCCGCGTTGCACGAGGTGTTTGAGAAACAGCACGAGGC
TCAGTCTGTCTTGACTAAATACTCCGGCTTCTTTGTGAATCGAGGCAATT
TGGACGTGGTCGGTCGCAAGGAGGGTGGGGAGGAGGGAGGGAAGAAGAAG
AGGGGGAGGAAGAGCGGGGGGGAGGGGGGAAGGAAGAAACCGAAGGGTAA
TGATAGTGGTAGAGGAGTGGGAGGAGTTACAGCAGGAGGAGAAGATACTA
AGAATGGTGGGGGGGTGGGTGGCGATGGGGGAGAAAATGAAGGCAAAGCG
AAGAAGATCAAGAAGCTGCAGAAGCAGCATCAGCAGAAGGTAGGAGGTGG
GGAGGTTGGAGACGACATGAGTGTGGTTAGCAACAGCAACAGCAGCATGG
CATTCGGTGGAGGTGGTGGAGGTGGGAGTGTAGGAAGCAACGCTAGCAGC
AGCAACAACATCACCACCAAGAACAAGGCAAAGGGCGCCGAAATGCAGGC
GGTCGCCCTGGTCACTTTCCAGGATGCTGTTAAGAAATGGCGCGAAGAGC
AGCAGCAGTCCTCATCACCAGATCCAGCAGCAGCAGCAGAAGCAGCAGCA
GGGGCAGTAACAGAAGGGGTGGCAGGGACAGTAGCAGGAGCAACAGCAGG
AGTAGCAGCAGGAGCAGGGCTAGACGAGCTGCCTCTTGCTTTGCGTCCAG
CTGCCTTGGCTTTTGACCTGGTCATGCGCCGTCCTGCCGGAGAGAAGAAA
TACAAGAGCACTCACCCGGGAGACAACGGGTTGAGTCCCCTTTATATTGA
TAAGCTGCAGGCTCTCTTGTTGTTGGGGGGGAAGGGGAGAGAGGGAGGGA
GGGCGTGGAGGAAGGGCTTGGCGGAGGCTGCGGTGGGAAGGGTGCGGGTG
TTGAATGGTTTGATGGAGGAATGCCTAGTAGGGTTTAGGCGACAGTATGA
GGTGAAGTTGGAGAGGCTCACCAAACGGGCGTGCAGCAACAGCAACAGCA
GCAGTAGTAAGATGGAAAGGGGCGAGGAAGGGATGGAGGGACAGCAGGAC
GAGGCGATGCCGCCGCCGAAGAGCGTGGCATTGGATATGAAGTTGAAGCA
GTGCCTGTACACCCTTTTGACTAGCTTAAAGGAGAGGAGCAGCATTCAGG
TGTTATTTGCGGGACGAGGGCTTGAGGGGGGGGCGGAGGGAGAGGAAGCG
GAGGGGTTATTGCCTTTGGTGCCGGTGAAGCATGAGGAGGAAGAACGGAA
GGTGTTGACGACATTGGCGATGATGTGGCCAGAGGAAGGGATGAAGATTC
CTCGGCTGCGGCGGGCCTTCAATGACTACAAGGGGAGGCAGCAATTGTTG
CAGAGCGTGAACGGTGCTGATGCTGCTGGAGGTGGCGGGAAAGGGGGAGG
AAGCGATGAAGCTGGTGCCCTGGTGCAGAAGAAGGCTCAGCCAAAGGAAA
ATGGGATCACGGTGTCTGCGCATGCGAAATTGAAGAAGACCTCACCCACG
ACGATGGCGACGACGAAGACGACTAAAAAGACACAGAATAAGGTGGTCAC
GGTCGCGACCAAGCAGCGGGCAGGGCCCTGTAAAGGTTCTTTCCAGGGTT
TGCAGCGCATTCCGTTTAATGCCGCCGACTTCGAGCAGGAGGCCAGAAAT
GACTAGATGGAGGAAGAGGGGGAAGGAACGACGGAGGGAAGAGGCAGAGA
ATTTGTGGTTTGAAAATATTGGAGGCGATGTTCGAATAAAAAGCATGATT
GACATTAACGAGTAAAAGCATTGATGGGA
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protein sequence of NO09G03040.1

>NO09G03040.1-protein ID=NO09G03040.1-protein|Name=NO09G03040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=676bp
MRIRALALDRETQRVSATKIRRLRSVTFGLPLHAQRSLQLPHPHYPFHPS
LSSSCSKKKKKKNKPSPLSDDEESFNDPRGIGNFIKMLETKYCGHAGMRS
GQGGEEGGSKKRAHKHDLYDLDDDIIDDSALHEVFEKQHEAQSVLTKYSG
FFVNRGNLDVVGRKEGGEEGGKKKRGRKSGGEGGRKKPKGNDSGRGVGGV
TAGGEDTKNGGGVGGDGGENEGKAKKIKKLQKQHQQKVGGGEVGDDMSVV
SNSNSSMAFGGGGGGGSVGSNASSSNNITTKNKAKGAEMQAVALVTFQDA
VKKWREEQQQSSSPDPAAAAEAAAGAVTEGVAGTVAGATAGVAAGAGLDE
LPLALRPAALAFDLVMRRPAGEKKYKSTHPGDNGLSPLYIDKLQALLLLG
GKGREGGRAWRKGLAEAAVGRVRVLNGLMEECLVGFRRQYEVKLERLTKR
ACSNSNSSSSKMERGEEGMEGQQDEAMPPPKSVALDMKLKQCLYTLLTSL
KERSSIQVLFAGRGLEGGAEGEEAEGLLPLVPVKHEEEERKVLTTLAMMW
PEEGMKIPRLRRAFNDYKGRQQLLQSVNGADAAGGGGKGGGSDEAGALVQ
KKAQPKENGITVSAHAKLKKTSPTTMATTKTTKKTQNKVVTVATKQRAGP
CKGSFQGLQRIPFNAADFEQEARND*
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protein sequence of NO09G03040.2

>NO09G03040.2-protein ID=NO09G03040.2-protein|Name=NO09G03040.2|organism=Nannochloropsis oceanica|type=polypeptide|length=695bp
MSPSLHMPLAFLTQPDPLLPNKFTFSHMYSPSPTTIMGKYKSKHRVRVVL
SDLKEPEFSLGALLGHSNSTGDDARKKKKKKNKPSPLSDDEESFNDPRGI
GNFIKMLETKYCGHAGMRSGQGGEEGGSKKRAHKHDLYDLDDDIIDDSAL
HEVFEKQHEAQSVLTKYSGFFVNRGNLDVVGRKEGGEEGGKKKRGRKSGG
EGGRKKPKGNDSGRGVGGVTAGGEDTKNGGGVGGDGGENEGKAKKIKKLQ
KQHQQKVGGGEVGDDMSVVSNSNSSMAFGGGGGGGSVGSNASSSNNITTK
NKAKGAEMQAVALVTFQDAVKKWREEQQQSSSPDPAAAAEAAAGAVTEGV
AGTVAGATAGVAAGAGLDELPLALRPAALAFDLVMRRPAGEKKYKSTHPG
DNGLSPLYIDKLQALLLLGGKGREGGRAWRKGLAEAAVGRVRVLNGLMEE
CLVGFRRQYEVKLERLTKRACSNSNSSSSKMERGEEGMEGQQDEAMPPPK
SVALDMKLKQCLYTLLTSLKERSSIQVLFAGRGLEGGAEGEEAEGLLPLV
PVKHEEEERKVLTTLAMMWPEEGMKIPRLRRAFNDYKGRQQLLQSVNGAD
AAGGGGKGGGSDEAGALVQKKAQPKENGITVSAHAKLKKTSPTTMATTKT
TKKTQNKVVTVATKQRAGPCKGSFQGLQRIPFNAADFEQEARND*
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Synonyms
Publications